data_ACR # _chem_comp.id ACR _chem_comp.name ALPHA-ACARBOSE _chem_comp.type saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C25 H43 N O18" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "1,4-DEOXY-4-((5-HYDROXYMETHYL-2,3,4-TRIHYDROXYCYCLOHEX-5,6-ENYL)AMINO)FRUCTOSE" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status OBS _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 645.605 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ACR _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3WEO _chem_comp.pdbx_subcomponent_list "GLC GLC AC1" _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal ACR C1D C20 C 0 1 N N S 3.988 4.651 -26.202 7.404 -2.440 0.110 GLC 1 C1 polymer 1 1 ACR C2D C21 C 0 1 N N R 2.530 5.083 -26.384 7.552 -1.336 -0.941 GLC 1 C2 polymer 1 2 ACR C3D C22 C 0 1 N N R 1.626 4.690 -25.223 6.710 -0.127 -0.522 GLC 1 C3 polymer 1 3 ACR C4D C23 C 0 1 N N S 1.759 3.200 -24.974 5.254 -0.569 -0.344 GLC 1 C4 polymer 1 4 ACR C5D C24 C 0 1 N N R 3.238 2.931 -24.735 5.195 -1.702 0.683 GLC 1 C5 polymer 1 5 ACR C6D C25 C 0 1 N N N 3.510 1.470 -24.408 3.752 -2.190 0.822 GLC 1 C6 polymer 1 6 ACR O1D O18 O 0 1 N Y N 4.663 5.436 -25.187 7.907 -1.974 1.363 GLC 1 O1 polymer 1 7 ACR O2D O13 O 0 1 N N N 2.465 6.514 -26.533 8.924 -0.952 -1.040 GLC 1 O2 polymer 1 8 ACR O3D O14 O 0 1 N N N 0.271 5.041 -25.546 6.784 0.880 -1.533 GLC 1 O3 polymer 1 9 ACR O4D O15 O 0 1 N N N 1.037 2.790 -23.817 4.473 0.535 0.116 GLC 1 O4 polymer 1 10 ACR O5D O16 O 0 1 N N N 4.002 3.265 -25.894 6.023 -2.782 0.248 GLC 1 O5 polymer 1 11 ACR O6D O17 O 0 1 N N N 4.892 1.266 -24.084 3.681 -3.180 1.850 GLC 1 O6 polymer 1 12 ACR C1C C14 C 0 1 N N R -0.284 2.327 -24.099 3.994 1.384 -0.928 GLC 2 C1 polymer 1 13 ACR C2C C15 C 0 1 N N R -1.032 2.247 -22.791 3.448 2.680 -0.323 GLC 2 C2 polymer 1 14 ACR C3C C16 C 0 1 N N R -0.426 1.218 -21.858 2.262 2.349 0.588 GLC 2 C3 polymer 1 15 ACR C4C C17 C 0 1 N N S -0.499 -0.131 -22.572 1.204 1.596 -0.223 GLC 2 C4 polymer 1 16 ACR C5C C18 C 0 1 N N R 0.261 -0.032 -23.884 1.836 0.342 -0.833 GLC 2 C5 polymer 1 17 ACR C6C C19 C 0 1 N N N 0.205 -1.327 -24.692 0.800 -0.384 -1.694 GLC 2 C6 polymer 1 18 ACR O2C O8 O 0 1 N N N -0.974 3.542 -22.168 4.473 3.319 0.441 GLC 2 O2 polymer 1 19 ACR O3C O9 O 0 1 N N N -1.097 1.202 -20.591 1.700 3.559 1.100 GLC 2 O3 polymer 1 20 ACR O4C O10 O 0 1 N N N 0.142 -1.170 -21.832 0.124 1.219 0.633 GLC 2 O4 polymer 1 21 ACR O5C O11 O 0 1 N N N -0.215 1.048 -24.710 2.951 0.718 -1.643 GLC 2 O5 polymer 1 22 ACR O6C O12 O 0 1 N N N -1.140 -1.710 -25.003 1.360 -1.604 -2.184 GLC 2 O6 polymer 1 23 ACR C1B C8 C 0 1 N N R -0.604 -1.735 -20.758 -0.864 2.237 0.806 AC1 3 C1 polymer 1 24 ACR O2B O5 O 0 1 N N N 1.514 -1.991 -19.655 -1.020 1.670 3.152 AC1 3 O2 polymer 1 25 ACR C2B C9 C 0 1 N N R 0.327 -2.693 -20.037 -1.791 1.857 1.963 AC1 3 C2 polymer 1 26 ACR C4A C4 C 0 1 N N R -2.277 -9.275 -22.339 -7.980 -1.586 -0.323 AC1 3 C4 polymer 1 27 ACR C3B C10 C 0 1 N N S 0.648 -3.883 -20.939 -2.521 0.555 1.617 AC1 3 C3A polymer 1 28 ACR O3B O6 O 0 1 N N N 1.465 -4.801 -20.223 -3.443 0.232 2.659 AC1 3 O3A polymer 1 29 ACR C4B C11 C 0 1 N N S -0.636 -4.592 -21.333 -3.281 0.744 0.301 AC1 3 C4A polymer 1 30 ACR N4B N1 N 0 1 N N N -0.424 -5.825 -22.133 -3.926 -0.520 -0.080 AC1 3 N4A polymer 1 31 ACR C5B C12 C 0 1 N N R -1.509 -3.572 -22.063 -2.296 1.167 -0.793 AC1 3 C5A polymer 1 32 ACR O5B O7 O 0 1 N N N -1.747 -2.434 -21.229 -1.630 2.366 -0.393 AC1 3 O5 polymer 1 33 ACR C6B C13 C 0 1 N N N -2.882 -4.141 -22.401 -3.057 1.416 -2.096 AC1 3 C6A polymer 1 34 ACR C1A C1 C 0 1 N N S -0.349 -7.138 -21.443 -5.285 -0.605 0.471 AC1 3 C1B polymer 1 35 ACR C2A C2 C 0 1 N N S 0.034 -8.347 -22.305 -5.705 -2.074 0.553 AC1 3 C2B polymer 1 36 ACR O2A O1 O 0 1 N N N 1.226 -8.063 -23.048 -5.455 -2.716 -0.700 AC1 3 O2B polymer 1 37 ACR C3A C3 C 0 1 N N S -1.130 -8.766 -23.194 -7.204 -2.133 0.877 AC1 3 C3B polymer 1 38 ACR O3A O2 O 0 1 N N N -0.771 -9.859 -24.044 -7.477 -1.334 2.030 AC1 3 O3B polymer 1 39 ACR O4A O3 O 0 1 N N N -3.423 -9.439 -23.165 -7.899 -2.518 -1.404 AC1 3 O4 polymer 1 40 ACR C5A C5 C 0 1 N N N -2.548 -8.331 -21.197 -7.403 -0.270 -0.757 AC1 3 C5B polymer 1 41 ACR C7A C7 C 0 1 N N N -1.687 -7.383 -20.802 -6.229 0.154 -0.415 AC1 3 C7B polymer 1 42 ACR C6A C6 C 0 1 N N N -3.816 -8.459 -20.388 -8.242 0.611 -1.646 AC1 3 C6B polymer 1 43 ACR O6A O4 O 0 1 N N N -3.660 -9.601 -19.554 -7.522 1.809 -1.945 AC1 3 O6B polymer 1 44 ACR H1D H34 H 0 1 N N N 4.501 4.808 -27.162 7.967 -3.319 -0.204 GLC 1 H1 polymer 1 45 ACR H2D H35 H 0 1 N N N 2.144 4.605 -27.297 7.205 -1.704 -1.907 GLC 1 H2 polymer 1 46 ACR H3D H36 H 0 1 N N N 1.950 5.232 -24.322 7.088 0.271 0.419 GLC 1 H3 polymer 1 47 ACR H4D H37 H 0 1 N N N 1.424 2.646 -25.863 4.861 -0.922 -1.298 GLC 1 H4 polymer 1 48 ACR H5D H38 H 0 1 N N N 3.569 3.545 -23.884 5.550 -1.338 1.647 GLC 1 H5 polymer 1 49 ACR H6D1 H39 H 0 0 N N N 2.891 1.172 -23.549 3.108 -1.350 1.082 GLC 1 H61 polymer 1 50 ACR H6D2 H40 H 0 0 N N N 3.249 0.851 -25.280 3.422 -2.623 -0.122 GLC 1 H62 polymer 1 51 ACR HOD1 H44 H 0 1 N N N 5.562 5.140 -25.103 7.845 -2.623 2.078 GLC 1 HO1 polymer 1 52 ACR HOD2 H41 H 0 0 N N N 1.560 6.780 -26.646 9.517 -1.671 -1.297 GLC 1 HO2 polymer 1 53 ACR HOD3 H42 H 0 0 N N N -0.300 4.799 -24.826 7.679 1.202 -1.704 GLC 1 HO3 polymer 1 54 ACR HOD6 H43 H 0 0 N N N 5.039 0.349 -23.884 2.793 -3.535 1.994 GLC 1 HO6 polymer 1 55 ACR H1C H24 H 0 1 N N N -0.799 3.037 -24.762 4.811 1.618 -1.610 GLC 2 H1 polymer 1 56 ACR H2C H25 H 0 1 N N N -2.078 1.973 -22.993 3.121 3.346 -1.121 GLC 2 H2 polymer 1 57 ACR H3C H26 H 0 1 N N N 0.634 1.470 -21.707 2.600 1.726 1.416 GLC 2 H3 polymer 1 58 ACR H4C H27 H 0 1 N N N -1.551 -0.383 -22.773 0.829 2.240 -1.019 GLC 2 H4 polymer 1 59 ACR H5C H28 H 0 1 N N N 1.317 0.157 -23.640 2.173 -0.319 -0.035 GLC 2 H5 polymer 1 60 ACR H6C1 H30 H 0 0 N N N 0.759 -1.183 -25.631 0.518 0.250 -2.535 GLC 2 H61 polymer 1 61 ACR H6C2 H29 H 0 0 N N N 0.677 -2.131 -24.107 -0.082 -0.604 -1.093 GLC 2 H62 polymer 1 62 ACR HOC2 H31 H 0 0 N N N -1.439 3.517 -21.340 5.259 3.553 -0.072 GLC 2 HO2 polymer 1 63 ACR HOC3 H32 H 0 0 N N N -0.697 0.549 -20.028 2.319 4.091 1.620 GLC 2 HO3 polymer 1 64 ACR HOC6 H33 H 0 0 N N N -1.132 -2.517 -25.504 0.758 -2.118 -2.740 GLC 2 HO6 polymer 1 65 ACR H1B H12 H 0 1 N N N -0.909 -0.945 -20.056 -0.375 3.185 1.029 AC1 3 H1 polymer 1 66 ACR HOB2 H22 H 0 0 N N N 1.283 -1.258 -19.096 -0.527 2.454 3.428 AC1 3 HO2 polymer 1 67 ACR H2B H13 H 0 1 N N N -0.186 -3.068 -19.139 -2.520 2.652 2.123 AC1 3 HC2 polymer 1 68 ACR H4A H4 H 0 1 N N N -1.986 -10.249 -21.920 -9.025 -1.448 -0.045 AC1 3 HC4 polymer 1 69 ACR H3B H14 H 0 1 N N N 1.162 -3.526 -21.844 -1.796 -0.252 1.508 AC1 3 HCA3 polymer 1 70 ACR HOB3 H23 H 0 0 N N N 2.274 -4.373 -19.968 -3.030 0.105 3.524 AC1 3 HOA3 polymer 1 71 ACR H4B H15 H 0 1 N N N -1.159 -4.873 -20.407 -4.040 1.516 0.426 AC1 3 HCA4 polymer 1 72 ACR HN4 H20 H 0 1 N N N 0.437 -5.707 -22.628 -3.369 -1.311 0.208 AC1 3 HN4 polymer 1 73 ACR H5B H16 H 0 1 N N N -1.006 -3.268 -22.993 -1.562 0.376 -0.946 AC1 3 HCA5 polymer 1 74 ACR H6B1 H19 H 0 0 N N N -3.396 -4.434 -21.474 -3.493 0.480 -2.447 AC1 3 H6A1 polymer 1 75 ACR H6B2 H17 H 0 0 N N N -3.477 -3.378 -22.924 -3.851 2.142 -1.921 AC1 3 H6A2 polymer 1 76 ACR H6B3 H18 H 0 0 N N N -2.764 -5.022 -23.049 -2.371 1.802 -2.850 AC1 3 H6A3 polymer 1 77 ACR H1A H1 H 0 1 N N N 0.398 -7.057 -20.640 -5.298 -0.169 1.470 AC1 3 HCB1 polymer 1 78 ACR H2A H2 H 0 1 N N N 0.241 -9.183 -21.620 -5.141 -2.574 1.339 AC1 3 HCB2 polymer 1 79 ACR HOA2 H8 H 0 0 N N N 1.919 -7.808 -22.450 -5.699 -3.651 -0.718 AC1 3 HO2B polymer 1 80 ACR H3A H3 H 0 1 N N N -1.468 -7.904 -23.788 -7.498 -3.165 1.064 AC1 3 HCB3 polymer 1 81 ACR HOA3 H9 H 0 0 N N N -0.052 -9.599 -24.608 -8.411 -1.313 2.281 AC1 3 HOB3 polymer 1 82 ACR HOA4 H10 H 0 0 N N N -4.149 -9.758 -22.641 -8.370 -2.237 -2.201 AC1 3 HO4 polymer 1 83 ACR H7A H7 H 0 1 N N N -1.972 -6.755 -19.971 -5.909 1.115 -0.790 AC1 3 HC7 polymer 1 84 ACR H6A1 H5 H 0 0 N N N -3.965 -7.559 -19.773 -8.469 0.083 -2.571 AC1 3 HC61 polymer 1 85 ACR H6A2 H6 H 0 0 N N N -4.679 -8.594 -21.056 -9.170 0.864 -1.134 AC1 3 HC62 polymer 1 86 ACR HOA6 H11 H 0 0 N N N -4.441 -9.717 -19.026 -8.003 2.424 -2.515 AC1 3 HO6B polymer 1 87 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACR O2D C2D SING N N 1 ACR C2D C1D SING N N 2 ACR C2D C3D SING N N 3 ACR C1D O5D SING N N 4 ACR O5D C5D SING N N 5 ACR O3D C3D SING N N 6 ACR C3D C4D SING N N 7 ACR O6C C6C SING N N 8 ACR C4D C5D SING N N 9 ACR C4D O4D SING N N 10 ACR C5D C6D SING N N 11 ACR O5C C1C SING N N 12 ACR O5C C5C SING N N 13 ACR C6C C5C SING N N 14 ACR C6D O6D SING N N 15 ACR C1C O4D SING N N 16 ACR C1C C2C SING N N 17 ACR O3A C3A SING N N 18 ACR C5C C4C SING N N 19 ACR C3A C4A SING N N 20 ACR C3A C2A SING N N 21 ACR O4A C4A SING N N 22 ACR O2A C2A SING N N 23 ACR C2C O2C SING N N 24 ACR C2C C3C SING N N 25 ACR C4C C3C SING N N 26 ACR C4C O4C SING N N 27 ACR C6B C5B SING N N 28 ACR C4A C5A SING N N 29 ACR C2A C1A SING N N 30 ACR N4B C1A SING N N 31 ACR N4B C4B SING N N 32 ACR C5B C4B SING N N 33 ACR C5B O5B SING N N 34 ACR C3C O3C SING N N 35 ACR O4C C1B SING N N 36 ACR C1A C7A SING N N 37 ACR C4B C3B SING N N 38 ACR O5B C1B SING N N 39 ACR C5A C7A DOUB N N 40 ACR C5A C6A SING N N 41 ACR C3B O3B SING N N 42 ACR C3B C2B SING N N 43 ACR C1B C2B SING N N 44 ACR C6A O6A SING N N 45 ACR C2B O2B SING N N 46 ACR C1D O1D SING N N 47 ACR C1A H1A SING N N 48 ACR C2A H2A SING N N 49 ACR C3A H3A SING N N 50 ACR C4A H4A SING N N 51 ACR C6A H6A1 SING N N 52 ACR C6A H6A2 SING N N 53 ACR C7A H7A SING N N 54 ACR O2A HOA2 SING N N 55 ACR O3A HOA3 SING N N 56 ACR O4A HOA4 SING N N 57 ACR O6A HOA6 SING N N 58 ACR C1B H1B SING N N 59 ACR C2B H2B SING N N 60 ACR C3B H3B SING N N 61 ACR C4B H4B SING N N 62 ACR C5B H5B SING N N 63 ACR C6B H6B2 SING N N 64 ACR C6B H6B3 SING N N 65 ACR C6B H6B1 SING N N 66 ACR N4B HN4 SING N N 67 ACR O2B HOB2 SING N N 68 ACR O3B HOB3 SING N N 69 ACR C1C H1C SING N N 70 ACR C2C H2C SING N N 71 ACR C3C H3C SING N N 72 ACR C4C H4C SING N N 73 ACR C5C H5C SING N N 74 ACR C6C H6C2 SING N N 75 ACR C6C H6C1 SING N N 76 ACR O2C HOC2 SING N N 77 ACR O3C HOC3 SING N N 78 ACR O6C HOC6 SING N N 79 ACR C1D H1D SING N N 80 ACR C2D H2D SING N N 81 ACR C3D H3D SING N N 82 ACR C4D H4D SING N N 83 ACR C5D H5D SING N N 84 ACR C6D H6D1 SING N N 85 ACR C6D H6D2 SING N N 86 ACR O2D HOD2 SING N N 87 ACR O3D HOD3 SING N N 88 ACR O6D HOD6 SING N N 89 ACR O1D HOD1 SING N N 90 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ACR SMILES ACDLabs 10.04 "O(C1C(OC(O)C(O)C1O)CO)C4OC(C(OC3OC(C)C(NC2C=C(CO)C(O)C(O)C2O)C(O)C3O)C(O)C4O)CO" ACR SMILES_CANONICAL CACTVS 3.352 "C[C@H]1O[C@H](O[C@H]2[C@H](O)[C@@H](O)[C@H](O[C@@H]2CO)O[C@H]3[C@H](O)[C@@H](O)[C@@H](O)O[C@@H]3CO)[C@H](O)[C@@H](O)[C@@H]1N[C@H]4C=C(CO)[C@@H](O)[C@H](O)[C@H]4O" ACR SMILES CACTVS 3.352 "C[CH]1O[CH](O[CH]2[CH](O)[CH](O)[CH](O[CH]2CO)O[CH]3[CH](O)[CH](O)[CH](O)O[CH]3CO)[CH](O)[CH](O)[CH]1N[CH]4C=C(CO)[CH](O)[CH](O)[CH]4O" ACR SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "C[C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)O[C@@H]2[C@H](O[C@@H]([C@@H]([C@H]2O)O)O[C@@H]3[C@H](O[C@@H]([C@@H]([C@H]3O)O)O)CO)CO)O)O)N[C@H]4C=C([C@H]([C@@H]([C@H]4O)O)O)CO" ACR SMILES "OpenEye OEToolkits" 1.7.0 "CC1C(C(C(C(O1)OC2C(OC(C(C2O)O)OC3C(OC(C(C3O)O)O)CO)CO)O)O)NC4C=C(C(C(C4O)O)O)CO" ACR InChI InChI 1.03 "InChI=1S/C25H43NO18/c1-6-11(26-8-2-7(3-27)12(30)15(33)13(8)31)14(32)19(37)24(40-6)43-22-10(5-29)42-25(20(38)17(22)35)44-21-9(4-28)41-23(39)18(36)16(21)34/h2,6,8-39H,3-5H2,1H3/t6-,8+,9-,10-,11-,12-,13+,14+,15+,16-,17-,18-,19-,20-,21-,22-,23+,24-,25-/m1/s1" ACR InChIKey InChI 1.03 XUFXOAAUWZOOIT-WVJZLWNXSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ACR "SYSTEMATIC NAME" ACDLabs 10.04 "4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranosyl-(1->4)-alpha-D-glucopyranosyl-(1->4)-alpha-D-glucopyranose" ACR "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "(2S,3R,4R,5S,6R)-5-[(2R,3R,4R,5S,6R)-5-[(2R,3R,4S,5S,6R)-3,4-dihydroxy-6-methyl-5-[[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino]oxan-2-yl]oxy-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-6-(hydroxymethyl)oxane-2,3,4-triol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ACR "Create component" 1999-07-08 RCSB ACR "Modify descriptor" 2011-06-04 RCSB ACR "Other modification" 2020-07-03 RCSB ACR "Obsolete component" 2020-07-17 RCSB ##