data_AMX # _chem_comp.id AMX _chem_comp.name "AMIDOCARBOXYMETHYLDETHIA COENZYME *A" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAC _chem_comp.formula "C23 H39 N8 O17 P3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 792.520 _chem_comp.one_letter_code ? _chem_comp.three_letter_code AMX _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1CSH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal AMX N1A AN1 N 0 1 Y N N 19.531 -8.047 13.305 5.914 1.915 -7.765 N1A AMX 1 AMX C2A AC2 C 0 1 Y N N 18.960 -8.618 14.353 4.759 1.852 -8.402 C2A AMX 2 AMX N3A AN3 N 0 1 Y N N 18.129 -9.653 14.415 3.641 1.500 -7.803 N3A AMX 3 AMX C4A AC4 C 0 1 Y N N 17.892 -10.167 13.205 3.634 1.183 -6.513 C4A AMX 4 AMX C5A AC5 C 0 1 Y N N 18.401 -9.691 12.012 4.837 1.240 -5.789 C5A AMX 5 AMX C6A AC6 C 0 1 Y N N 19.277 -8.579 12.091 6.004 1.621 -6.472 C6A AMX 6 AMX N6A AN6 N 0 1 N N N 19.838 -7.966 11.082 7.219 1.690 -5.813 N6A AMX 7 AMX N7A AN7 N 0 1 Y N N 17.913 -10.472 10.969 4.553 0.881 -4.514 N7A AMX 8 AMX C8A AC8 C 0 1 Y N N 17.149 -11.396 11.547 3.282 0.619 -4.410 C8A AMX 9 AMX N9A AN9 N 0 1 Y N N 17.135 -11.287 12.911 2.671 0.794 -5.616 N9A AMX 10 AMX C1B AC1* C 0 1 N N R 16.242 -12.064 13.773 1.248 0.597 -5.903 C1B AMX 11 AMX C2B AC2* C 0 1 N N R 14.815 -11.783 13.321 0.955 -0.887 -6.236 C2B AMX 12 AMX O2B AO2* O 0 1 N N N 14.373 -10.485 13.624 1.171 -1.151 -7.624 O2B AMX 13 AMX C3B AC3* C 0 1 N N S 14.095 -12.954 14.005 -0.548 -1.010 -5.878 C3B AMX 14 AMX O3B AO3* O 0 1 N N N 14.063 -12.857 15.409 -1.353 -0.887 -7.052 O3B AMX 15 AMX P3B AP3* P 0 1 N N N 12.653 -13.089 16.190 -2.216 -2.241 -7.170 P3B AMX 16 AMX O7A AO7 O 0 1 N N N 11.598 -12.387 15.403 -3.062 -2.394 -5.965 O7A AMX 17 AMX O8A AO8 O 0 1 N N N 12.800 -12.747 17.631 -3.151 -2.170 -8.478 O8A AMX 18 AMX O9A AO9 O 0 1 N N N 12.433 -14.565 16.065 -1.221 -3.502 -7.289 O9A AMX 19 AMX C4B AC4* C 0 1 N N R 15.053 -14.075 13.651 -0.801 0.165 -4.915 C4B AMX 20 AMX O4B AO4* O 0 1 N N N 16.346 -13.422 13.491 0.453 0.841 -4.723 O4B AMX 21 AMX C5B AC5* C 0 1 N N N 14.703 -14.819 12.389 -1.319 -0.360 -3.575 C5B AMX 22 AMX O5B AO5* O 0 1 N N N 14.447 -13.880 11.343 -1.543 0.736 -2.687 O5B AMX 23 AMX P1A AP1 P 0 1 N N S 14.820 -14.330 9.854 -2.085 0.113 -1.305 P1A AMX 24 AMX O1A AO1 O 0 1 N N N 13.992 -15.538 9.476 -1.071 -0.812 -0.751 O1A AMX 25 AMX O2A AO2 O 0 1 N N N 16.287 -14.428 9.833 -3.453 -0.690 -1.578 O2A AMX 26 AMX O3A AO3 O 0 1 N N N 14.449 -12.948 9.157 -2.360 1.300 -0.253 O3A AMX 27 AMX P2A AP2 P 0 1 N N S 13.059 -12.627 8.405 -2.896 0.608 1.098 P2A AMX 28 AMX O4A AO4 O 0 1 N N N 13.045 -13.312 7.078 -4.141 -0.137 0.810 O4A AMX 29 AMX O5A AO5 O 0 1 N N N 11.882 -12.524 9.301 -1.780 -0.406 1.660 O5A AMX 30 AMX O6A AO6 O 0 1 N N N 13.399 -11.058 8.129 -3.193 1.744 2.200 O6A AMX 31 AMX CBP PC11 C 0 1 N N N 14.734 -9.179 7.541 -3.966 2.098 4.463 CBP AMX 32 AMX CCP PC12 C 0 1 N N N 14.359 -10.604 7.185 -3.663 1.071 3.370 CCP AMX 33 AMX CDP PC13 C 0 1 N N N 15.428 -8.510 6.330 -2.691 2.875 4.799 CDP AMX 34 AMX CEP PC14 C 0 1 N N N 13.444 -8.474 7.995 -5.039 3.069 3.967 CEP AMX 35 AMX CAP PC10 C 0 1 N N R 15.700 -9.285 8.744 -4.469 1.377 5.715 CAP AMX 36 AMX OAP PO10 O 0 1 N N N 16.872 -9.993 8.344 -5.730 0.765 5.438 OAP AMX 37 AMX C9P PC9 C 0 1 N N N 16.034 -7.932 9.349 -3.474 0.320 6.120 C9P AMX 38 AMX O9P PO9 O 0 1 N N N 15.277 -7.475 10.231 -3.746 -0.853 5.979 O9P AMX 39 AMX N8P PN8 N 0 1 N N N 17.105 -7.293 8.905 -2.283 0.678 6.638 N8P AMX 40 AMX C7P PC7 C 0 1 N N N 17.455 -5.960 9.440 -1.349 -0.348 7.106 C7P AMX 41 AMX C6P PC6 C 0 1 N N N 16.760 -4.865 8.608 -0.082 0.320 7.643 C6P AMX 42 AMX C5P PC5 C 0 1 N N N 17.261 -4.744 7.171 0.877 -0.735 8.125 C5P AMX 43 AMX O5P PO5 O 0 1 N N N 18.473 -4.749 6.935 0.578 -1.908 8.046 O5P AMX 44 AMX N4P PN4 N 0 1 N N N 16.327 -4.606 6.203 2.069 -0.377 8.643 N4P AMX 45 AMX C3P PC3 C 0 1 N N N 16.682 -4.440 4.805 3.003 -1.404 9.111 C3P AMX 46 AMX C2P PC2 C 0 1 N N N 16.388 -5.670 3.929 4.269 -0.735 9.648 C2P AMX 47 AMX C1 C1 C 0 1 N N N 16.736 -5.328 2.447 5.245 -1.807 10.137 C1 AMX 48 AMX C2 C2 C 0 1 N N N 15.667 -4.443 1.807 6.492 -1.148 10.666 C2 AMX 49 AMX O2 O2 O 0 1 N N N 14.492 -4.795 1.890 6.592 0.059 10.653 O2 AMX 50 AMX N2 N2 N 0 1 N N N 16.023 -3.249 1.353 7.498 -1.902 11.154 N2 AMX 51 AMX H2A AH2 H 0 1 N N N 19.216 -8.161 15.323 4.731 2.099 -9.453 H2A AMX 52 AMX H61A AH61 H 0 0 N N N 19.646 -8.368 10.164 8.018 1.954 -6.295 H61A AMX 53 AMX H62A AH62 H 0 0 N N N 20.844 -7.897 11.230 7.272 1.473 -4.869 H62A AMX 54 AMX H8A AH8 H 0 1 N N N 16.597 -12.156 10.968 2.785 0.309 -3.503 H8A AMX 55 AMX H1B AH1* H 0 1 N N N 16.487 -11.810 14.830 0.929 1.244 -6.721 H1B AMX 56 AMX H2B AH2* H 0 1 N N N 14.638 -11.756 12.220 1.559 -1.551 -5.617 H2B AMX 57 AMX HO2A AHO2 H 0 0 N N N 13.482 -10.309 13.342 2.104 -0.968 -7.801 HO2A AMX 58 AMX H3B AH3* H 0 1 N N N 13.029 -13.045 13.690 -0.745 -1.960 -5.379 H3B AMX 59 AMX HOA8 8HOA H 0 0 N N N 11.977 -12.882 18.086 -3.649 -2.998 -8.511 HOA8 AMX 60 AMX HOA9 9HOA H 0 0 N N N 11.610 -14.700 16.520 -0.689 -3.363 -8.085 HOA9 AMX 61 AMX H4B AH4* H 0 1 N N N 15.027 -14.851 14.450 -1.528 0.851 -5.350 H4B AMX 62 AMX H51A AH51 H 0 0 N N N 15.483 -15.563 12.106 -0.582 -1.035 -3.140 H51A AMX 63 AMX H52A AH52 H 0 0 N N N 13.855 -15.527 12.537 -2.254 -0.897 -3.733 H52A AMX 64 AMX HOA2 2HOA H 0 0 N N N 16.508 -14.695 8.948 -4.085 -0.052 -1.937 HOA2 AMX 65 AMX HOA5 5HOA H 0 0 N N N 11.063 -12.334 8.858 -0.987 0.118 1.835 HOA5 AMX 66 AMX H121 1H12 H 0 0 N N N 15.245 -11.277 7.114 -2.898 0.379 3.723 H121 AMX 67 AMX H122 2H12 H 0 0 N N N 14.008 -10.706 6.131 -4.571 0.517 3.130 H122 AMX 68 AMX H131 1H13 H 0 0 N N N 15.703 -7.461 6.591 -1.890 2.175 5.033 H131 AMX 69 AMX H132 2H13 H 0 0 N N N 16.303 -9.098 5.968 -2.402 3.486 3.944 H132 AMX 70 AMX H133 3H13 H 0 0 N N N 14.806 -8.563 5.405 -2.875 3.519 5.659 H133 AMX 71 AMX H141 1H14 H 0 0 N N N 13.719 -7.425 8.256 -5.968 2.525 3.791 H141 AMX 72 AMX H142 2H14 H 0 0 N N N 12.623 -8.536 7.243 -5.207 3.840 4.718 H142 AMX 73 AMX H143 3H14 H 0 0 N N N 12.920 -9.008 8.821 -4.709 3.532 3.037 H143 AMX 74 AMX H10 H10 H 0 1 N N N 15.187 -9.853 9.555 -4.585 2.096 6.526 H10 AMX 75 AMX HO1 HO1 H 0 1 N N N 17.465 -10.058 9.083 -5.583 0.137 4.716 HO1 AMX 76 AMX HN8 HN8 H 0 1 N N N 17.630 -7.798 8.191 -2.044 1.616 6.701 HN8 AMX 77 AMX H71 1H7 H 0 1 N N N 17.224 -5.870 10.527 -1.817 -0.930 7.900 H71 AMX 78 AMX H72 2H7 H 0 1 N N N 18.558 -5.807 9.496 -1.089 -1.007 6.278 H72 AMX 79 AMX H61 1H6 H 0 1 N N N 15.654 -5.010 8.621 0.385 0.902 6.849 H61 AMX 80 AMX H62 2H6 H 0 1 N N N 16.830 -3.880 9.127 -0.343 0.979 8.471 H62 AMX 81 AMX HN4 HN4 H 0 1 N N N 15.359 -4.627 6.525 2.308 0.560 8.706 HN4 AMX 82 AMX H31 1H3 H 0 1 N N N 16.189 -3.533 4.382 2.535 -1.986 9.905 H31 AMX 83 AMX H32 2H3 H 0 1 N N N 17.750 -4.138 4.707 3.263 -2.063 8.283 H32 AMX 84 AMX H21 1H2 H 0 1 N N N 16.913 -6.584 4.289 4.738 -0.153 8.854 H21 AMX 85 AMX H22 2H2 H 0 1 N N N 15.341 -6.036 4.046 4.009 -0.076 10.476 H22 AMX 86 AMX H11 1H1 H 0 1 N N N 17.748 -4.869 2.362 4.777 -2.389 10.931 H11 AMX 87 AMX H12 2H1 H 0 1 N N N 16.913 -6.251 1.847 5.505 -2.466 9.309 H12 AMX 88 AMX HN21 1HN2 H 0 0 N N N 16.997 -2.957 1.284 8.301 -1.478 11.494 HN21 AMX 89 AMX HN22 2HN2 H 0 0 N N N 15.309 -2.658 0.925 7.418 -2.869 11.164 HN22 AMX 90 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal AMX N1A C2A SING Y N 1 AMX N1A C6A DOUB Y N 2 AMX C2A N3A DOUB Y N 3 AMX C2A H2A SING N N 4 AMX N3A C4A SING Y N 5 AMX C4A C5A DOUB Y N 6 AMX C4A N9A SING Y N 7 AMX C5A C6A SING Y N 8 AMX C5A N7A SING Y N 9 AMX C6A N6A SING N N 10 AMX N6A H61A SING N N 11 AMX N6A H62A SING N N 12 AMX N7A C8A DOUB Y N 13 AMX C8A N9A SING Y N 14 AMX C8A H8A SING N N 15 AMX N9A C1B SING N N 16 AMX C1B C2B SING N N 17 AMX C1B O4B SING N N 18 AMX C1B H1B SING N N 19 AMX C2B O2B SING N N 20 AMX C2B C3B SING N N 21 AMX C2B H2B SING N N 22 AMX O2B HO2A SING N N 23 AMX C3B O3B SING N N 24 AMX C3B C4B SING N N 25 AMX C3B H3B SING N N 26 AMX O3B P3B SING N N 27 AMX P3B O7A DOUB N N 28 AMX P3B O8A SING N N 29 AMX P3B O9A SING N N 30 AMX O8A HOA8 SING N N 31 AMX O9A HOA9 SING N N 32 AMX C4B O4B SING N N 33 AMX C4B C5B SING N N 34 AMX C4B H4B SING N N 35 AMX C5B O5B SING N N 36 AMX C5B H51A SING N N 37 AMX C5B H52A SING N N 38 AMX O5B P1A SING N N 39 AMX P1A O1A DOUB N N 40 AMX P1A O2A SING N N 41 AMX P1A O3A SING N N 42 AMX O2A HOA2 SING N N 43 AMX O3A P2A SING N N 44 AMX P2A O4A DOUB N N 45 AMX P2A O5A SING N N 46 AMX P2A O6A SING N N 47 AMX O5A HOA5 SING N N 48 AMX O6A CCP SING N N 49 AMX CBP CCP SING N N 50 AMX CBP CDP SING N N 51 AMX CBP CEP SING N N 52 AMX CBP CAP SING N N 53 AMX CCP H121 SING N N 54 AMX CCP H122 SING N N 55 AMX CDP H131 SING N N 56 AMX CDP H132 SING N N 57 AMX CDP H133 SING N N 58 AMX CEP H141 SING N N 59 AMX CEP H142 SING N N 60 AMX CEP H143 SING N N 61 AMX CAP OAP SING N N 62 AMX CAP C9P SING N N 63 AMX CAP H10 SING N N 64 AMX OAP HO1 SING N N 65 AMX C9P O9P DOUB N N 66 AMX C9P N8P SING N N 67 AMX N8P C7P SING N N 68 AMX N8P HN8 SING N N 69 AMX C7P C6P SING N N 70 AMX C7P H71 SING N N 71 AMX C7P H72 SING N N 72 AMX C6P C5P SING N N 73 AMX C6P H61 SING N N 74 AMX C6P H62 SING N N 75 AMX C5P O5P DOUB N N 76 AMX C5P N4P SING N N 77 AMX N4P C3P SING N N 78 AMX N4P HN4 SING N N 79 AMX C3P C2P SING N N 80 AMX C3P H31 SING N N 81 AMX C3P H32 SING N N 82 AMX C2P C1 SING N N 83 AMX C2P H21 SING N N 84 AMX C2P H22 SING N N 85 AMX C1 C2 SING N N 86 AMX C1 H11 SING N N 87 AMX C1 H12 SING N N 88 AMX C2 O2 DOUB N N 89 AMX C2 N2 SING N N 90 AMX N2 HN21 SING N N 91 AMX N2 HN22 SING N N 92 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor AMX SMILES ACDLabs 10.04 "O=C(N)CCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3OP(=O)(O)O" AMX SMILES_CANONICAL CACTVS 3.341 "CC(C)(CO[P@@](O)(=O)O[P@](O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O[P](O)(O)=O)n2cnc3c(N)ncnc23)[C@@H](O)C(=O)NCCC(=O)NCCCC(N)=O" AMX SMILES CACTVS 3.341 "CC(C)(CO[P](O)(=O)O[P](O)(=O)OC[CH]1O[CH]([CH](O)[CH]1O[P](O)(O)=O)n2cnc3c(N)ncnc23)[CH](O)C(=O)NCCC(=O)NCCCC(N)=O" AMX SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC(C)(CO[P@](=O)(O)O[P@@](=O)(O)OC[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)OP(=O)(O)O)[C@H](C(=O)NCCC(=O)NCCCC(=O)N)O" AMX SMILES "OpenEye OEToolkits" 1.5.0 "CC(C)(COP(=O)(O)OP(=O)(O)OCC1C(C(C(O1)n2cnc3c2ncnc3N)O)OP(=O)(O)O)C(C(=O)NCCC(=O)NCCCC(=O)N)O" AMX InChI InChI 1.03 ;InChI=1S/C23H39N8O17P3/c1-23(2,18(35)21(36)27-7-5-14(33)26-6-3-4-13(24)32)9-45-51(42,43)48-50(40,41)44-8-12-17(47-49(37,38)39)16(34)22(46-12)31-11-30-15-19(25)28-10-29-20(15)31/h10-12,16-18,22,34-35H,3-9H2,1-2H3,(H2,24,32)(H,26,33)(H,27,36)(H,40,41)(H,42,43)(H2,25,28,29)(H2,37,38,39)/t12-,16-,17-,18+,22-/m1/s1 ; AMX InChIKey InChI 1.03 RMWCNISNSABOOL-GRFIIANRSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier AMX "SYSTEMATIC NAME" ACDLabs 10.04 "(3R)-4-({3-[(4-amino-4-oxobutyl)amino]-3-oxopropyl}amino)-3-hydroxy-2,2-dimethyl-4-oxobutyl [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]methyl dihydrogen diphosphate (non-preferred name)" AMX "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[[(3R)-4-[[3-[(4-amino-4-oxo-butyl)amino]-3-oxo-propyl]amino]-3-hydroxy-2,2-dimethyl-4-oxo-butoxy]-hydroxy-phosphoryl] [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-hydroxy-3-phosphonooxy-oxolan-2-yl]methyl hydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site AMX "Create component" 1999-07-08 RCSB AMX "Modify descriptor" 2011-06-04 RCSB #