data_APH # _chem_comp.id APH _chem_comp.name P-AMIDINOPHENYL-3-ALANINE _chem_comp.type "D-PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C10 H13 N3 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "D-BETA(4-AMIDINOPHENYL)-ALANINE" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 207.229 _chem_comp.one_letter_code A _chem_comp.three_letter_code APH _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1QUR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal APH N N N 0 1 N N N 16.128 -14.223 20.589 -2.145 1.402 0.902 N APH 1 APH CA CA C 0 1 N N R 16.365 -12.833 20.342 -2.411 0.036 0.431 CA APH 2 APH C C C 0 1 N N N 17.435 -12.828 19.266 -3.887 -0.128 0.175 C APH 3 APH O O O 0 1 N N N 17.123 -12.931 18.077 -4.584 0.845 0.009 O APH 4 APH CB CB C 0 1 N N N 15.086 -12.131 19.871 -1.637 -0.216 -0.864 CB APH 5 APH CG CG C 0 1 Y N N 13.968 -12.119 20.904 -0.158 -0.173 -0.582 CG APH 6 APH CD1 CD1 C 0 1 Y N N 13.125 -13.198 21.061 0.511 -1.331 -0.229 CD1 APH 7 APH CD2 CD2 C 0 1 Y N N 13.818 -11.034 21.769 0.528 1.025 -0.683 CD2 APH 8 APH CE1 CE1 C 0 1 Y N N 12.139 -13.204 22.088 1.865 -1.298 0.030 CE1 APH 9 APH CE2 CE2 C 0 1 Y N N 12.840 -11.044 22.790 1.883 1.070 -0.427 CE2 APH 10 APH CZ CZ C 0 1 Y N N 12.001 -12.128 22.954 2.561 -0.093 -0.065 CZ APH 11 APH CF CF C 0 1 N N N 11.019 -12.127 24.021 4.015 -0.051 0.213 CF APH 12 APH NG1 NG1 N 0 1 N N N 10.289 -13.199 24.294 4.647 -1.140 0.546 NG1 APH 13 APH NG2 NG2 N 0 1 N N N 10.859 -11.010 24.735 4.700 1.141 0.118 NG2 APH 14 APH OXT OXT O 0 1 N Y N 18.712 -12.709 19.693 -4.428 -1.356 0.130 OXT APH 15 APH H HN1 H 0 1 N N N 16.073 -14.712 19.718 -2.432 2.084 0.216 H APH 16 APH H2 HN2 H 0 1 N Y N 16.878 -14.597 21.134 -2.593 1.572 1.790 H2 APH 17 APH HA HA H 0 1 N N N 16.680 -12.288 21.244 -2.092 -0.678 1.190 HA APH 18 APH HB2 HB1 H 0 1 N N N 15.340 -11.087 19.633 -1.903 -1.196 -1.261 HB2 APH 19 APH HB3 HB2 H 0 1 N N N 14.713 -12.694 19.002 -1.891 0.553 -1.595 HB3 APH 20 APH HD1 HD1 H 0 1 N N N 13.213 -14.047 20.399 -0.030 -2.264 -0.155 HD1 APH 21 APH HD2 HD2 H 0 1 N N N 14.460 -10.173 21.657 0.002 1.925 -0.964 HD2 APH 22 APH HE1 HE1 H 0 1 N N N 11.488 -14.059 22.195 2.386 -2.203 0.307 HE1 APH 23 APH HE2 HE2 H 0 1 N N N 12.748 -10.194 23.449 2.418 2.006 -0.506 HE2 APH 24 APH HG1 HG1 H 0 1 N N N 9.676 -12.998 25.058 5.599 -1.112 0.728 HG1 APH 25 APH HG21 HG21 H 0 0 N N N 11.484 -10.307 24.397 4.230 1.952 -0.131 HG21 APH 26 APH HG22 HG22 H 0 0 N N N 10.214 -10.895 25.491 5.653 1.169 0.299 HG22 APH 27 APH HXT HXT H 0 1 N Y N 19.298 -12.719 18.946 -5.379 -1.411 -0.037 HXT APH 28 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal APH N CA SING N N 1 APH N H SING N N 2 APH N H2 SING N N 3 APH CA C SING N N 4 APH CA CB SING N N 5 APH CA HA SING N N 6 APH C O DOUB N N 7 APH C OXT SING N N 8 APH CB CG SING N N 9 APH CB HB2 SING N N 10 APH CB HB3 SING N N 11 APH CG CD1 DOUB Y N 12 APH CG CD2 SING Y N 13 APH CD1 CE1 SING Y N 14 APH CD1 HD1 SING N N 15 APH CD2 CE2 DOUB Y N 16 APH CD2 HD2 SING N N 17 APH CE1 CZ DOUB Y N 18 APH CE1 HE1 SING N N 19 APH CE2 CZ SING Y N 20 APH CE2 HE2 SING N N 21 APH CZ CF SING N N 22 APH CF NG1 DOUB N N 23 APH CF NG2 SING N N 24 APH NG1 HG1 SING N N 25 APH NG2 HG21 SING N N 26 APH NG2 HG22 SING N N 27 APH OXT HXT SING N N 28 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor APH SMILES ACDLabs 10.04 "O=C(O)C(N)Cc1ccc(cc1)C(=[N@H])N" APH SMILES_CANONICAL CACTVS 3.341 "N[C@H](Cc1ccc(cc1)C(N)=N)C(O)=O" APH SMILES CACTVS 3.341 "N[CH](Cc1ccc(cc1)C(N)=N)C(O)=O" APH SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1cc(ccc1C[C@H](C(=O)O)N)C(=N)N" APH SMILES "OpenEye OEToolkits" 1.5.0 "c1cc(ccc1CC(C(=O)O)N)C(=N)N" APH InChI InChI 1.03 "InChI=1S/C10H13N3O2/c11-8(10(14)15)5-6-1-3-7(4-2-6)9(12)13/h1-4,8H,5,11H2,(H3,12,13)(H,14,15)/t8-/m1/s1" APH InChIKey InChI 1.03 XPRCPVGCTGELMN-MRVPVSSYSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier APH "SYSTEMATIC NAME" ACDLabs 10.04 4-carbamimidoyl-D-phenylalanine APH "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2R)-2-amino-3-(4-carbamimidoylphenyl)propanoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site APH "Create component" 1999-07-08 EBI APH "Modify descriptor" 2011-06-04 RCSB APH "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id APH _pdbx_chem_comp_synonyms.name "D-BETA(4-AMIDINOPHENYL)-ALANINE" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##