data_AQP # _chem_comp.id AQP _chem_comp.name "ADENOSINE-5'-TETRAPHOSPHATE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H17 N5 O16 P4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2003-03-12 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 587.161 _chem_comp.one_letter_code ? _chem_comp.three_letter_code AQP _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal AQP N6 N6 N 0 1 N N N 51.146 29.022 31.838 8.813 3.764 0.602 N6 AQP 1 AQP C6 C6 C 0 1 Y N N 52.275 28.858 32.477 8.507 2.527 0.064 C6 AQP 2 AQP N1 N1 N 0 1 Y N N 53.412 29.604 32.073 9.416 1.839 -0.620 N1 AQP 3 AQP C2 C2 C 0 1 Y N N 54.681 29.544 32.672 9.133 0.658 -1.137 C2 AQP 4 AQP N3 N3 N 0 1 Y N N 54.853 28.660 33.715 7.949 0.096 -1.011 N3 AQP 5 AQP C4 C4 C 0 1 Y N N 53.757 27.867 34.165 6.976 0.709 -0.344 C4 AQP 6 AQP N9 N9 N 0 1 Y N N 53.673 26.927 35.172 5.673 0.409 -0.038 N9 AQP 7 AQP C8 C8 C 0 1 Y N N 52.356 26.478 35.201 5.173 1.450 0.685 C8 AQP 8 AQP N7 N7 N 0 1 Y N N 51.581 27.078 34.251 6.086 2.364 0.839 N7 AQP 9 AQP C5 C5 C 0 1 Y N N 52.466 27.941 33.598 7.229 1.966 0.231 C5 AQP 10 AQP "C1'" C1* C 0 1 N N R 54.793 26.477 36.062 4.952 -0.808 -0.419 "C1'" AQP 11 AQP "O4'" O4* O 0 1 N N N 54.912 25.173 35.741 3.526 -0.577 -0.392 "O4'" AQP 12 AQP "C4'" C4* C 0 1 N N R 55.254 24.327 36.873 2.930 -1.887 -0.284 "C4'" AQP 13 AQP "C5'" C5* C 0 1 N N N 54.500 23.084 36.895 1.502 -1.780 0.255 "C5'" AQP 14 AQP "O5'" O5* O 0 1 N N N 53.167 23.399 37.351 0.680 -1.112 -0.703 "O5'" AQP 15 AQP PA PA P 0 1 N N S 52.198 22.336 37.889 -0.800 -1.034 -0.072 PA AQP 16 AQP O1A O1A O 0 1 N N N 51.612 21.622 36.786 -1.395 -2.522 0.084 O1A AQP 17 AQP O2A O2A O 0 1 N N N 52.914 21.544 38.863 -0.737 -0.385 1.256 O2A AQP 18 AQP O3A O3A O 0 1 N N N 51.069 23.141 38.582 -1.753 -0.175 -1.045 O3A AQP 19 AQP PB PB P 0 1 N N R 50.059 24.158 37.924 -3.004 0.314 -0.157 PB AQP 20 AQP O2B O2B O 0 1 N N N 50.402 25.632 38.186 -2.574 1.596 0.716 O2B AQP 21 AQP O1B O1B O 0 1 N N N 48.696 23.908 38.522 -3.425 -0.780 0.747 O1B AQP 22 AQP O3B O3B O 0 1 N N N 50.217 23.589 36.415 -4.228 0.710 -1.125 O3B AQP 23 AQP PG PG P 0 1 N N S 49.300 23.501 35.185 -5.543 0.799 -0.201 PG AQP 24 AQP O2G O2G O 0 1 N N N 50.022 23.571 33.887 -5.565 2.214 0.566 O2G AQP 25 AQP O1G O1G O 0 1 N N N 48.290 24.541 35.332 -5.525 -0.300 0.790 O1G AQP 26 AQP O3G O3G O 0 1 N N N 48.635 22.210 35.399 -6.856 0.668 -1.123 O3G AQP 27 AQP PD PD P 0 1 N N N 47.226 21.818 36.104 -8.090 0.364 -0.134 PD AQP 28 AQP O2D O2D O 0 1 N N N 47.129 20.356 36.291 -8.585 1.738 0.545 O2D AQP 29 AQP O1D O1D O 0 1 N N N 47.086 22.471 37.439 -9.302 -0.286 -0.972 O1D AQP 30 AQP O3D O3D O 0 1 N N N 46.099 22.262 35.200 -7.657 -0.579 0.920 O3D AQP 31 AQP "C3'" C3* C 0 1 N N S 55.219 25.256 38.109 3.829 -2.649 0.714 "C3'" AQP 32 AQP "O3'" O3* O 0 1 N N N 56.505 25.586 38.620 3.962 -4.018 0.325 "O3'" AQP 33 AQP "C2'" C2* C 0 1 N N R 54.397 26.381 37.508 5.192 -1.924 0.622 "C2'" AQP 34 AQP "O2'" O2* O 0 1 N N N 54.283 27.608 38.114 6.209 -2.823 0.176 "O2'" AQP 35 AQP HN61 1HN6 H 0 0 N N N 51.180 29.874 31.315 9.699 4.140 0.483 HN61 AQP 36 AQP HN62 2HN6 H 0 0 N N N 50.393 29.064 32.495 8.139 4.259 1.096 HN62 AQP 37 AQP H2 H2 H 0 1 N N N 55.492 30.168 32.328 9.901 0.133 -1.686 H2 AQP 38 AQP H8 H8 H 0 1 N N N 51.989 25.738 35.897 4.166 1.508 1.073 H8 AQP 39 AQP "H1'" H1* H 0 1 N N N 55.650 27.156 35.940 5.264 -1.139 -1.409 "H1'" AQP 40 AQP "H4'" H4* H 0 1 N N N 56.267 23.900 36.826 2.932 -2.386 -1.254 "H4'" AQP 41 AQP "H5'1" 1H5* H 0 0 N N N 54.977 22.352 37.564 1.107 -2.779 0.439 "H5'1" AQP 42 AQP "H5'2" 2H5* H 0 0 N N N 54.463 22.644 35.887 1.508 -1.215 1.187 "H5'2" AQP 43 AQP H1A H1A H 0 1 N N N 51.483 22.216 36.056 -1.419 -2.908 -0.802 H1A AQP 44 AQP H2B H2B H 0 1 N N N 50.473 25.780 39.122 -2.308 2.284 0.091 H2B AQP 45 AQP H2G H2G H 0 1 N N N 49.393 23.586 33.175 -5.576 2.901 -0.114 H2G AQP 46 AQP H2D H2D H 0 1 N N N 47.108 19.929 35.443 -8.857 2.323 -0.175 H2D AQP 47 AQP H1D H1D H 0 1 N N N 47.056 21.805 38.116 -10.018 -0.452 -0.344 H1D AQP 48 AQP "H3'" H3* H 0 1 N N N 54.793 24.843 39.035 3.424 -2.578 1.724 "H3'" AQP 49 AQP H1 H1 H 0 1 N N N 57.122 25.660 37.902 4.531 -4.441 0.982 H1 AQP 50 AQP "H2'" H2* H 0 1 N N N 53.357 26.070 37.688 5.461 -1.493 1.587 "H2'" AQP 51 AQP H3 H3 H 0 1 N N N 54.257 27.495 39.057 6.269 -3.527 0.836 H3 AQP 52 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal AQP N6 C6 SING N N 1 AQP N6 HN61 SING N N 2 AQP N6 HN62 SING N N 3 AQP C6 N1 DOUB Y N 4 AQP C6 C5 SING Y N 5 AQP N1 C2 SING Y N 6 AQP C2 N3 DOUB Y N 7 AQP C2 H2 SING N N 8 AQP N3 C4 SING Y N 9 AQP C4 N9 SING Y N 10 AQP C4 C5 DOUB Y N 11 AQP N9 C8 SING Y N 12 AQP N9 "C1'" SING N N 13 AQP C8 N7 DOUB Y N 14 AQP C8 H8 SING N N 15 AQP N7 C5 SING Y N 16 AQP "C1'" "O4'" SING N N 17 AQP "C1'" "C2'" SING N N 18 AQP "C1'" "H1'" SING N N 19 AQP "O4'" "C4'" SING N N 20 AQP "C4'" "C5'" SING N N 21 AQP "C4'" "C3'" SING N N 22 AQP "C4'" "H4'" SING N N 23 AQP "C5'" "O5'" SING N N 24 AQP "C5'" "H5'1" SING N N 25 AQP "C5'" "H5'2" SING N N 26 AQP "O5'" PA SING N N 27 AQP PA O1A SING N N 28 AQP PA O2A DOUB N N 29 AQP PA O3A SING N N 30 AQP O1A H1A SING N N 31 AQP O3A PB SING N N 32 AQP PB O2B SING N N 33 AQP PB O1B DOUB N N 34 AQP PB O3B SING N N 35 AQP O2B H2B SING N N 36 AQP O3B PG SING N N 37 AQP PG O2G SING N N 38 AQP PG O1G DOUB N N 39 AQP PG O3G SING N N 40 AQP O2G H2G SING N N 41 AQP O3G PD SING N N 42 AQP PD O2D SING N N 43 AQP PD O1D SING N N 44 AQP PD O3D DOUB N N 45 AQP O2D H2D SING N N 46 AQP O1D H1D SING N N 47 AQP "C3'" "O3'" SING N N 48 AQP "C3'" "C2'" SING N N 49 AQP "C3'" "H3'" SING N N 50 AQP "O3'" H1 SING N N 51 AQP "C2'" "O2'" SING N N 52 AQP "C2'" "H2'" SING N N 53 AQP "O2'" H3 SING N N 54 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor AQP SMILES ACDLabs 10.04 "O=P(O)(O)OP(=O)(O)OP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O" AQP SMILES_CANONICAL CACTVS 3.341 "Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P@](O)(=O)O[P@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O" AQP SMILES CACTVS 3.341 "Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O" AQP SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)O[P@@](=O)(O)O[P@@](=O)(O)OP(=O)(O)O)O)O)N" AQP SMILES "OpenEye OEToolkits" 1.5.0 "c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N" AQP InChI InChI 1.03 "InChI=1S/C10H17N5O16P4/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(28-10)1-27-33(21,22)30-35(25,26)31-34(23,24)29-32(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H,23,24)(H,25,26)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1" AQP InChIKey InChI 1.03 WWMWAMFHUSTZTA-KQYNXXCUSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier AQP "SYSTEMATIC NAME" ACDLabs 10.04 "5'-O-[(S)-hydroxy{[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]oxy}phosphoryl]adenosine" AQP "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl [hydroxy-(hydroxy-phosphonooxy-phosphoryl)oxy-phosphoryl] hydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site AQP "Create component" 2003-03-12 RCSB AQP "Modify descriptor" 2011-06-04 RCSB #