data_ARV # _chem_comp.id ARV _chem_comp.name 5-N-ALLYL-ARGININE _chem_comp.type "L-PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C9 H19 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2001-10-22 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 215.273 _chem_comp.one_letter_code X _chem_comp.three_letter_code ARV _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details "OpenEye/OEToolkits V1.4.2" _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1K2S _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ARV N N N 0 1 N N N 9.312 -1.376 26.454 -0.481 0.914 -1.006 N ARV 1 ARV CA CA C 0 1 N N S 8.877 -1.664 25.100 0.042 2.163 -1.558 CA ARV 2 ARV C C C 0 1 N N N 8.787 -3.150 24.852 -0.850 2.580 -2.714 C ARV 3 ARV O O O 0 1 N N N 8.403 -3.557 23.669 -1.794 1.935 -3.151 O ARV 4 ARV CB CB C 0 1 N N N 9.869 -1.018 24.123 1.510 2.018 -1.988 CB ARV 5 ARV CG CG C 0 1 N N N 10.052 0.491 24.303 1.745 1.017 -3.130 CG ARV 6 ARV CD CD C 0 1 N N N 11.340 0.970 23.659 3.210 0.954 -3.557 CD ARV 7 ARV NE NE N 0 1 N N N 12.466 0.048 24.036 4.052 0.545 -2.458 NE ARV 8 ARV CZ CZ C 0 1 N N N 13.784 0.063 23.682 5.452 0.411 -2.570 CZ ARV 9 ARV NH1 NH1 N 0 1 N N N 14.484 -0.885 24.169 6.088 0.678 -3.782 NH1 ARV 10 ARV NH2 NH2 N 1 1 N N N 14.449 0.907 22.904 6.185 0.008 -1.448 NH2 ARV 11 ARV OXT OXT O 0 1 N Y N 9.051 -3.952 25.673 -0.483 3.783 -3.230 OXT ARV 12 ARV C1 C1 C 0 1 N N N 13.823 2.070 22.236 5.554 -0.280 -0.160 C1 ARV 13 ARV C2 C2 C 0 1 N N N 13.941 1.920 20.715 6.617 -0.677 0.808 C2 ARV 14 ARV C3 C3 C 0 1 N N N 12.893 2.191 19.918 6.642 -1.851 1.449 C3 ARV 15 ARV H H H 0 1 N N N 8.913 -0.510 26.755 -0.086 0.578 -0.156 H ARV 16 ARV H2 HN2 H 0 1 N Y N 10.310 -1.310 26.477 -1.057 0.350 -1.591 H2 ARV 17 ARV HA HA H 0 1 N N N 7.869 -1.249 24.950 -0.038 2.929 -0.778 HA ARV 18 ARV HB2 1HB H 0 1 N N N 9.457 -1.166 23.114 2.107 1.717 -1.118 HB2 ARV 19 ARV HB3 2HB H 0 1 N N N 10.848 -1.495 24.274 1.888 3.002 -2.295 HB3 ARV 20 ARV HG2 1HG H 0 1 N N N 10.098 0.711 25.380 1.149 1.310 -4.003 HG2 ARV 21 ARV HG3 2HG H 0 1 N N N 9.204 1.011 23.833 1.407 0.018 -2.830 HG3 ARV 22 ARV HD2 1HD H 0 1 N N N 11.568 1.987 24.010 3.323 0.229 -4.371 HD2 ARV 23 ARV HD3 2HD H 0 1 N N N 11.222 0.975 22.565 3.543 1.926 -3.935 HD3 ARV 24 ARV HE HE H 0 1 N N N 12.206 -0.700 24.647 3.643 0.335 -1.540 HE ARV 25 ARV HH11 2HH1 H 0 0 N N N 14.067 -1.786 23.936 5.568 0.972 -4.605 HH11 ARV 26 ARV HH12 HNH1 H 0 0 N N N 15.469 -0.874 23.904 7.095 0.587 -3.888 HH12 ARV 27 ARV HH2 1HH2 H 0 1 N N N 14.681 0.325 22.124 7.194 -0.085 -1.542 HH2 ARV 28 ARV HXT HXT H 0 1 N Y N 8.933 -4.824 25.314 -1.029 4.100 -3.981 HXT ARV 29 ARV HC11 1HC1 H 0 0 N N N 14.336 2.990 22.552 5.042 0.623 0.184 HC11 ARV 30 ARV HC12 2HC1 H 0 0 N N N 12.761 2.123 22.516 4.807 -1.066 -0.312 HC12 ARV 31 ARV HC2 HC2 H 0 1 N N N 14.874 1.594 20.280 7.408 0.042 1.006 HC2 ARV 32 ARV HC31 1HC3 H 0 0 N N N 11.918 2.522 20.243 7.441 -2.078 2.146 HC31 ARV 33 ARV HC32 2HC3 H 0 0 N N N 13.197 2.019 18.896 5.875 -2.600 1.291 HC32 ARV 34 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ARV N CA SING N N 1 ARV N H SING N N 2 ARV N H2 SING N N 3 ARV CA C SING N N 4 ARV CA CB SING N N 5 ARV CA HA SING N N 6 ARV C O DOUB N N 7 ARV C OXT SING N N 8 ARV CB CG SING N N 9 ARV CB HB2 SING N N 10 ARV CB HB3 SING N N 11 ARV CG CD SING N N 12 ARV CG HG2 SING N N 13 ARV CG HG3 SING N N 14 ARV CD NE SING N N 15 ARV CD HD2 SING N N 16 ARV CD HD3 SING N N 17 ARV NE CZ SING N N 18 ARV NE HE SING N N 19 ARV CZ NH1 SING N N 20 ARV CZ NH2 DOUB N N 21 ARV NH1 HH11 SING N N 22 ARV NH1 HH12 SING N N 23 ARV NH2 C1 SING N N 24 ARV NH2 HH2 SING N N 25 ARV OXT HXT SING N N 26 ARV C1 C2 SING N N 27 ARV C1 HC11 SING N N 28 ARV C1 HC12 SING N N 29 ARV C2 C3 DOUB N N 30 ARV C2 HC2 SING N N 31 ARV C3 HC31 SING N N 32 ARV C3 HC32 SING N N 33 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ARV SMILES ACDLabs 10.04 "O=C(O)C(N)CCCN\C(=[NH+]/C\C=C)N" ARV SMILES_CANONICAL CACTVS 3.341 "N[C@@H](CCCNC(N)=[NH+]CC=C)C(O)=O" ARV SMILES CACTVS 3.341 "N[CH](CCCNC(N)=[NH+]CC=C)C(O)=O" ARV SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C=CC\[NH+]=C(\N)/NCCC[C@@H](C(=O)O)N" ARV SMILES "OpenEye OEToolkits" 1.5.0 "C=CC[NH+]=C(N)NCCCC(C(=O)O)N" ARV InChI InChI 1.03 "InChI=1S/C9H18N4O2/c1-2-5-12-9(11)13-6-3-4-7(10)8(14)15/h2,7H,1,3-6,10H2,(H,14,15)(H3,11,12,13)/p+1/t7-/m0/s1" ARV InChIKey InChI 1.03 ZPQWZDPOLXVMOU-ZETCQYMHSA-O # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ARV "SYSTEMATIC NAME" ACDLabs 10.04 "N-[(1Z)-amino{[(4S)-4-amino-4-carboxybutyl]amino}methylidene]prop-2-en-1-aminium" ARV "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(Z)-[amino-[[(4S)-4-amino-5-hydroxy-5-oxo-pentyl]amino]methylidene]-prop-2-enyl-azanium" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ARV "Create component" 2001-10-22 RCSB ARV "Modify descriptor" 2011-06-04 RCSB #