data_B1V # _chem_comp.id B1V _chem_comp.name "2-[(2-OXO-2-PIPERIDIN-1-YLETHYL)SULFANYL]-6-(TRIFLUOROMETHYL)PYRIMIDIN-4-OL" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H14 F3 N3 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "2-[(2-OXO-2-PIPERIDIN-1-YLETHYL)THIO]-6-(TRIFLUOROMETHYL)PYRIMIDIN-4(1H)-ONE" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2004-06-22 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 321.319 _chem_comp.one_letter_code ? _chem_comp.three_letter_code B1V _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1TOU _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal B1V F27 F27 F 0 1 N N N 21.491 5.646 4.624 -1.837 0.243 4.752 F27 B1V 1 B1V C24 C24 C 0 1 N N N 20.312 5.057 4.636 -0.441 0.159 4.804 C24 B1V 2 B1V F25 F25 F 0 1 N N N 19.673 5.436 5.648 -0.069 -0.966 5.545 F25 B1V 3 B1V F26 F26 F 0 1 N N N 20.480 3.746 4.679 0.071 1.309 5.413 F26 B1V 4 B1V C9 C9 C 0 1 Y N N 19.587 5.422 3.430 0.106 0.044 3.405 C9 B1V 5 B1V N11 N11 N 0 1 Y N N 19.925 4.853 2.250 -0.711 0.034 2.364 N11 B1V 6 B1V C7 C7 C 0 1 Y N N 18.577 6.384 3.460 1.469 -0.051 3.195 C7 B1V 7 B1V C5 C5 C 0 1 Y N N 17.933 6.711 2.270 1.935 -0.157 1.885 C5 B1V 8 B1V O13 O13 O 0 1 N N N 16.936 7.635 2.246 3.263 -0.253 1.633 O13 B1V 9 B1V N3 N3 N 0 1 Y N N 18.300 6.119 1.125 1.059 -0.155 0.887 N3 B1V 10 B1V C1 C1 C 0 1 Y N N 19.291 5.197 1.121 -0.240 -0.066 1.130 C1 B1V 11 B1V S14 S14 S 0 1 N N N 19.716 4.453 -0.402 -1.369 -0.074 -0.222 S14 B1V 12 B1V C15 C15 C 0 1 N N N 21.066 3.337 0.070 -0.206 -0.227 -1.601 C15 B1V 13 B1V C16 C16 C 0 1 N N N 22.416 3.990 -0.169 -0.969 -0.255 -2.901 C16 B1V 14 B1V O23 O23 O 0 1 N N N 22.621 4.646 -1.183 -2.179 -0.179 -2.895 O23 B1V 15 B1V N17 N17 N 0 1 N N N 23.475 3.806 0.761 -0.306 -0.364 -4.069 N17 B1V 16 B1V C18 C18 C 0 1 N N N 23.024 3.854 2.166 1.160 -0.451 -4.092 C18 B1V 17 B1V C19 C19 C 0 1 N N N 24.151 3.395 3.096 1.707 0.626 -5.026 C19 B1V 18 B1V C20 C20 C 0 1 N N N 25.489 4.096 2.810 1.048 0.491 -6.400 C20 B1V 19 B1V C21 C21 C 0 1 N N N 25.787 4.378 1.332 -0.463 0.689 -6.264 C21 B1V 20 B1V C22 C22 C 0 1 N N N 24.550 4.796 0.548 -1.035 -0.393 -5.344 C22 B1V 21 B1V H7 H7 H 0 1 N N N 18.293 6.876 4.406 2.158 -0.046 4.027 H7 B1V 22 B1V H13 H13 H 0 1 N N N 16.497 7.858 1.434 3.479 -1.196 1.635 H13 B1V 23 B1V H151 1H15 H 0 0 N N N 20.987 2.353 -0.447 0.364 -1.149 -1.495 H151 B1V 24 B1V H152 2H15 H 0 0 N N N 20.960 2.983 1.122 0.474 0.623 -1.598 H152 B1V 25 B1V H181 1H18 H 0 0 N N N 22.088 3.269 2.324 1.552 -0.297 -3.087 H181 B1V 26 B1V H182 2H18 H 0 0 N N N 22.636 4.861 2.446 1.457 -1.434 -4.456 H182 B1V 27 B1V H191 1H19 H 0 0 N N N 24.267 2.287 3.063 2.786 0.508 -5.127 H191 B1V 28 B1V H192 2H19 H 0 0 N N N 23.859 3.516 4.165 1.486 1.610 -4.611 H192 B1V 29 B1V H201 1H20 H 0 0 N N N 26.327 3.517 3.264 1.249 -0.501 -6.803 H201 B1V 30 B1V H202 2H20 H 0 0 N N N 25.558 5.040 3.399 1.454 1.245 -7.074 H202 B1V 31 B1V H211 1H21 H 0 0 N N N 26.287 3.505 0.852 -0.929 0.616 -7.246 H211 B1V 32 B1V H212 2H21 H 0 0 N N N 26.600 5.133 1.226 -0.664 1.672 -5.838 H212 B1V 33 B1V H221 1H22 H 0 0 N N N 24.224 5.833 0.797 -0.915 -1.370 -5.811 H221 B1V 34 B1V H222 2H22 H 0 0 N N N 24.770 4.954 -0.534 -2.093 -0.199 -5.164 H222 B1V 35 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal B1V F27 C24 SING N N 1 B1V C24 F25 SING N N 2 B1V C24 F26 SING N N 3 B1V C24 C9 SING N N 4 B1V C9 N11 DOUB Y N 5 B1V C9 C7 SING Y N 6 B1V N11 C1 SING Y N 7 B1V C7 C5 DOUB Y N 8 B1V C7 H7 SING N N 9 B1V C5 O13 SING N N 10 B1V C5 N3 SING Y N 11 B1V O13 H13 SING N N 12 B1V N3 C1 DOUB Y N 13 B1V C1 S14 SING N N 14 B1V S14 C15 SING N N 15 B1V C15 C16 SING N N 16 B1V C15 H151 SING N N 17 B1V C15 H152 SING N N 18 B1V C16 O23 DOUB N N 19 B1V C16 N17 SING N N 20 B1V N17 C18 SING N N 21 B1V N17 C22 SING N N 22 B1V C18 C19 SING N N 23 B1V C18 H181 SING N N 24 B1V C18 H182 SING N N 25 B1V C19 C20 SING N N 26 B1V C19 H191 SING N N 27 B1V C19 H192 SING N N 28 B1V C20 C21 SING N N 29 B1V C20 H201 SING N N 30 B1V C20 H202 SING N N 31 B1V C21 C22 SING N N 32 B1V C21 H211 SING N N 33 B1V C21 H212 SING N N 34 B1V C22 H221 SING N N 35 B1V C22 H222 SING N N 36 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor B1V SMILES ACDLabs 10.04 "O=C(N1CCCCC1)CSc2nc(cc(O)n2)C(F)(F)F" B1V SMILES_CANONICAL CACTVS 3.341 "Oc1cc(nc(SCC(=O)N2CCCCC2)n1)C(F)(F)F" B1V SMILES CACTVS 3.341 "Oc1cc(nc(SCC(=O)N2CCCCC2)n1)C(F)(F)F" B1V SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1c(nc(nc1O)SCC(=O)N2CCCCC2)C(F)(F)F" B1V SMILES "OpenEye OEToolkits" 1.5.0 "c1c(nc(nc1O)SCC(=O)N2CCCCC2)C(F)(F)F" B1V InChI InChI 1.03 "InChI=1S/C12H14F3N3O2S/c13-12(14,15)8-6-9(19)17-11(16-8)21-7-10(20)18-4-2-1-3-5-18/h6H,1-5,7H2,(H,16,17,19)" B1V InChIKey InChI 1.03 UDBHGUOSOKOIAX-UHFFFAOYSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier B1V "SYSTEMATIC NAME" ACDLabs 10.04 "2-[(2-oxo-2-piperidin-1-ylethyl)sulfanyl]-6-(trifluoromethyl)pyrimidin-4-ol" B1V "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "2-[4-hydroxy-6-(trifluoromethyl)pyrimidin-2-yl]sulfanyl-1-piperidin-1-yl-ethanone" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site B1V "Create component" 2004-06-22 RCSB B1V "Modify descriptor" 2011-06-04 RCSB B1V "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id B1V _pdbx_chem_comp_synonyms.name "2-[(2-OXO-2-PIPERIDIN-1-YLETHYL)THIO]-6-(TRIFLUOROMETHYL)PYRIMIDIN-4(1H)-ONE" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##