data_B49 # _chem_comp.id B49 _chem_comp.name ;N-[2-(diethylamino)ethyl]-5-[(Z)-(5-fluoro-2-oxo-1,2-dihydro-3H-indol-3-ylidene)methyl]-2,4-dimethyl-1H-pyrrole-3-carbo xamide ; _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAD _chem_comp.formula "C22 H27 F N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms SUNITINIB _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2009-01-29 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 398.474 _chem_comp.one_letter_code ? _chem_comp.three_letter_code B49 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3G0F _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal B49 C4 C4 C 0 1 N N N -12.557 70.480 -38.384 1.117 3.173 -0.259 C4 B49 1 B49 C5 C5 C 0 1 Y N N -17.220 78.912 -37.041 -7.489 -0.699 0.742 C5 B49 2 B49 C6 C6 C 0 1 Y N N -15.949 78.688 -37.629 -6.728 0.133 1.538 C6 B49 3 B49 C7 C7 C 0 1 Y N N -17.461 76.483 -36.545 -5.593 -1.142 -0.659 C7 B49 4 B49 C13 C13 C 0 1 Y N N -15.752 71.336 -36.595 0.025 -0.263 -1.153 C13 B49 5 B49 C15 C15 C 0 1 Y N N -17.958 77.808 -36.503 -6.927 -1.337 -0.354 C15 B49 6 B49 C17 C17 C 0 1 Y N N -16.207 76.272 -37.131 -4.819 -0.304 0.138 C17 B49 7 B49 C20 C20 C 0 1 N N N -15.394 75.075 -37.360 -3.399 0.111 0.094 C20 B49 8 B49 C21 C21 C 0 1 N N N -14.131 75.547 -38.050 -3.230 1.016 1.239 C21 B49 9 B49 C22 C22 C 0 1 N N N -14.904 68.882 -36.682 2.477 0.520 -1.233 C22 B49 10 B49 C3 C3 C 0 1 N N N -17.005 71.109 -35.803 0.213 -1.688 -1.606 C3 B49 11 B49 C12 C12 C 0 1 N N N -15.845 73.861 -36.972 -2.442 -0.269 -0.825 C12 B49 12 B49 C14 C14 C 0 1 Y N N -13.806 70.966 -37.709 0.421 1.871 -0.562 C14 B49 13 B49 C16 C16 C 0 1 Y N N -15.474 77.362 -37.656 -5.385 0.341 1.246 C16 B49 14 B49 C18 C18 C 0 1 Y N N -15.288 72.553 -37.082 -1.169 0.342 -0.812 C18 B49 15 B49 C19 C19 C 0 1 Y N N -14.808 70.319 -36.989 1.036 0.709 -0.991 C19 B49 16 B49 N23 N23 N 0 1 Y N N -14.126 72.302 -37.744 -0.900 1.647 -0.456 N23 B49 17 B49 N24 N24 N 0 1 N N N -14.272 76.918 -38.180 -4.411 1.113 1.871 N24 B49 18 B49 N25 N25 N 0 1 N N N -15.265 68.579 -35.370 3.279 0.100 -0.235 N25 B49 19 B49 O27 O27 O 0 1 N N N -13.194 74.889 -38.421 -2.198 1.579 1.559 O27 B49 20 B49 O28 O28 O 0 1 N N N -14.663 68.027 -37.535 2.943 0.743 -2.334 O28 B49 21 B49 F29 F29 F 0 1 N N N -19.147 78.017 -35.944 -7.683 -2.149 -1.124 F29 B49 22 B49 H4 H4 H 0 1 N N N -12.784 70.210 -39.426 1.160 3.781 -1.163 H4 B49 23 B49 H4A H4A H 0 1 N N N -11.798 71.276 -38.368 0.566 3.709 0.513 H4A B49 24 B49 H4B H4B H 0 1 N N N -12.173 69.597 -37.852 2.130 2.970 0.091 H4B B49 25 B49 H5 H5 H 0 1 N N N -17.630 79.910 -36.999 -8.531 -0.859 0.978 H5 B49 26 B49 H6 H6 H 0 1 N N N -15.369 79.501 -38.039 -7.178 0.624 2.388 H6 B49 27 B49 H7 H7 H 0 1 N N N -18.031 75.661 -36.138 -5.153 -1.638 -1.511 H7 B49 28 B49 H3 H3 H 0 1 N N N -17.840 70.903 -36.488 0.128 -1.739 -2.691 H3 B49 29 B49 H3A H3A H 0 1 N N N -16.863 70.250 -35.130 1.199 -2.039 -1.302 H3A B49 30 B49 H3B H3B H 0 1 N N N -17.231 72.007 -35.209 -0.552 -2.318 -1.152 H3B B49 31 B49 H12 H12 H 0 1 N N N -16.810 73.887 -36.487 -2.666 -1.035 -1.554 H12 B49 32 B49 HN23 HN23 H 0 0 N N N -13.575 73.001 -38.199 -1.559 2.300 -0.175 HN23 B49 33 B49 HN24 HN24 H 0 0 N N N -13.589 77.515 -38.601 -4.566 1.652 2.662 HN24 B49 34 B49 HN25 HN25 H 0 0 N N N -15.337 67.610 -35.135 2.908 -0.079 0.643 HN25 B49 35 B49 C37 C171 C 0 1 N N N -15.550 69.544 -34.299 4.712 -0.088 -0.476 C37 B49 36 B49 C38 C181 C 0 1 N N N -15.938 69.045 -32.895 5.387 -0.566 0.811 C38 B49 37 B49 N4 N4 N 0 1 N N N -16.223 70.010 -31.823 6.824 -0.754 0.570 N4 B49 38 B49 C39 C191 C 0 1 N N N -15.135 70.493 -30.961 7.482 0.528 0.285 C39 B49 39 B49 C40 C201 C 0 1 N N N -17.596 70.493 -31.615 7.464 -1.434 1.704 C40 B49 40 B49 C41 C211 C 0 1 N N N -17.894 71.504 -30.493 7.119 -2.925 1.666 C41 B49 41 B49 C42 C221 C 0 1 N N N -15.434 71.504 -29.838 8.851 0.269 -0.347 C42 B49 42 B49 H14 H14 H 0 1 N N N -14.632 70.136 -34.169 4.854 -0.833 -1.259 H14 B49 43 B49 H15 H15 H 0 1 N N N -16.397 70.150 -34.652 5.155 0.858 -0.789 H15 B49 44 B49 H16 H16 H 0 1 N N N -16.856 68.454 -33.025 5.245 0.178 1.594 H16 B49 45 B49 H17 H17 H 0 1 N N N -15.091 68.439 -32.542 4.944 -1.512 1.124 H17 B49 46 B49 H18 H18 H 0 1 N N N -14.719 69.603 -30.467 6.867 1.107 -0.404 H18 B49 47 B49 H19 H19 H 0 1 N N N -14.411 70.984 -31.629 7.610 1.084 1.214 H19 B49 48 B49 H20 H20 H 0 1 N N N -17.893 70.983 -32.554 8.545 -1.310 1.639 H20 B49 49 B49 H21 H21 H 0 1 N N N -18.202 69.603 -31.393 7.103 -1.002 2.637 H21 B49 50 B49 H22 H22 H 0 1 N N N -18.967 71.746 -30.492 7.569 -3.424 2.523 H22 B49 51 B49 H23 H23 H 0 1 N N N -17.616 71.067 -29.523 6.036 -3.048 1.700 H23 B49 52 B49 H24 H24 H 0 1 N N N -17.312 72.422 -30.663 7.505 -3.364 0.746 H24 B49 53 B49 H25 H25 H 0 1 N N N -14.503 71.746 -29.304 8.720 -0.235 -1.305 H25 B49 54 B49 H26 H26 H 0 1 N N N -15.856 72.422 -30.274 9.365 1.217 -0.503 H26 B49 55 B49 H27 H27 H 0 1 N N N -16.157 71.066 -29.134 9.444 -0.361 0.316 H27 B49 56 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal B49 C4 C14 SING N N 1 B49 C4 H4 SING N N 2 B49 C4 H4A SING N N 3 B49 C4 H4B SING N N 4 B49 C5 C6 DOUB Y N 5 B49 C5 C15 SING Y N 6 B49 C5 H5 SING N N 7 B49 C6 C16 SING Y N 8 B49 C6 H6 SING N N 9 B49 C7 C15 DOUB Y N 10 B49 C7 C17 SING Y N 11 B49 C7 H7 SING N N 12 B49 C13 C3 SING N N 13 B49 C13 C18 DOUB Y N 14 B49 C13 C19 SING Y N 15 B49 C15 F29 SING N N 16 B49 C17 C20 SING N N 17 B49 C17 C16 DOUB Y N 18 B49 C20 C21 SING N N 19 B49 C20 C12 DOUB N Z 20 B49 C21 N24 SING N N 21 B49 C21 O27 DOUB N N 22 B49 C22 C19 SING N N 23 B49 C22 N25 SING N N 24 B49 C22 O28 DOUB N N 25 B49 C3 H3 SING N N 26 B49 C3 H3A SING N N 27 B49 C3 H3B SING N N 28 B49 C12 C18 SING N N 29 B49 C12 H12 SING N N 30 B49 C14 C19 DOUB Y N 31 B49 C14 N23 SING Y N 32 B49 C16 N24 SING N N 33 B49 C18 N23 SING Y N 34 B49 N23 HN23 SING N N 35 B49 N24 HN24 SING N N 36 B49 N25 HN25 SING N N 37 B49 N25 C37 SING N N 38 B49 C37 C38 SING N N 39 B49 C38 N4 SING N N 40 B49 N4 C39 SING N N 41 B49 N4 C40 SING N N 42 B49 C40 C41 SING N N 43 B49 C39 C42 SING N N 44 B49 C37 H14 SING N N 45 B49 C37 H15 SING N N 46 B49 C38 H16 SING N N 47 B49 C38 H17 SING N N 48 B49 C39 H18 SING N N 49 B49 C39 H19 SING N N 50 B49 C40 H20 SING N N 51 B49 C40 H21 SING N N 52 B49 C41 H22 SING N N 53 B49 C41 H23 SING N N 54 B49 C41 H24 SING N N 55 B49 C42 H25 SING N N 56 B49 C42 H26 SING N N 57 B49 C42 H27 SING N N 58 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor B49 SMILES ACDLabs 12.01 "O=C(NCCN(CC)CC)c1c(c(nc1C)/C=C3/c2cc(F)ccc2NC3=O)C" B49 InChI InChI 1.03 "InChI=1S/C22H27FN4O2/c1-5-27(6-2)10-9-24-22(29)20-13(3)19(25-14(20)4)12-17-16-11-15(23)7-8-18(16)26-21(17)28/h7-8,11-12,25H,5-6,9-10H2,1-4H3,(H,24,29)(H,26,28)/b17-12-" B49 InChIKey InChI 1.03 WINHZLLDWRZWRT-ATVHPVEESA-N B49 SMILES_CANONICAL CACTVS 3.370 "CCN(CC)CCNC(=O)c1c(C)[nH]c(/C=C/2C(=O)Nc3ccc(F)cc/23)c1C" B49 SMILES CACTVS 3.370 "CCN(CC)CCNC(=O)c1c(C)[nH]c(C=C2C(=O)Nc3ccc(F)cc23)c1C" B49 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "CCN(CC)CCNC(=O)c1c(c([nH]c1C)/C=C\2/c3cc(ccc3NC2=O)F)C" B49 SMILES "OpenEye OEToolkits" 1.7.2 "CCN(CC)CCNC(=O)c1c(c([nH]c1C)C=C2c3cc(ccc3NC2=O)F)C" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier B49 "SYSTEMATIC NAME" ACDLabs 12.01 "N-[2-(diethylamino)ethyl]-5-[(Z)-(5-fluoro-2-oxo-1,2-dihydro-3H-indol-3-ylidene)methyl]-2,4-dimethyl-1H-pyrrole-3-carboxamide" B49 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "N-(2-diethylaminoethyl)-5-[(Z)-(5-fluoranyl-2-oxidanylidene-1H-indol-3-ylidene)methyl]-2,4-dimethyl-1H-pyrrole-3-carboxamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site B49 "Create component" 2009-01-29 RCSB B49 "Modify descriptor" 2011-06-04 RCSB B49 "Modify component atom id" 2011-09-22 RCSB B49 "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id B49 _pdbx_chem_comp_synonyms.name SUNITINIB _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##