data_C0I # _chem_comp.id C0I _chem_comp.name "(3~{S})-1-[[4-[2-(1~{H}-indol-3-yl)ethylcarbamoyl]phenyl]methyl]-~{N}-[3-(1,2,3,4-tetrahydroacridin-9-ylamino)propyl]piperidine-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C40 H46 N6 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-12-14 _chem_comp.pdbx_modified_date 2022-12-16 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 642.832 _chem_comp.one_letter_code ? _chem_comp.three_letter_code C0I _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7QHD _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal C0I C10 C1 C 0 1 Y N N 17.251 42.909 37.340 -2.282 2.735 1.794 C10 C0I 1 C0I C13 C2 C 0 1 Y N N 16.145 41.601 39.072 -4.152 1.500 0.929 C13 C0I 2 C0I C15 C3 C 0 1 N N N 20.947 43.338 38.389 5.320 1.470 -0.808 C15 C0I 3 C0I C17 C4 C 0 1 Y N N 22.279 40.412 40.433 7.483 -1.493 -0.412 C17 C0I 4 C0I C20 C5 C 0 1 N N N 13.601 39.387 42.715 -7.970 -0.876 -0.973 C20 C0I 5 C0I C21 C6 C 0 1 Y N N 13.413 40.726 43.335 -8.906 -2.055 -0.893 C21 C0I 6 C0I C22 C7 C 0 1 Y N N 12.944 41.820 42.620 -8.778 -3.221 -1.546 C22 C0I 7 C0I C24 C8 C 0 1 Y N N 13.401 42.579 44.776 -10.658 -3.425 -0.332 C24 C0I 8 C0I C26 C9 C 0 1 Y N N 22.039 38.147 41.304 8.929 -2.784 1.002 C26 C0I 9 C0I C28 C10 C 0 1 Y N N 23.043 40.736 41.664 6.915 -2.703 -0.869 C28 C0I 10 C0I C01 C11 C 0 1 N N S 18.382 47.624 37.810 1.962 5.049 -0.781 C01 C0I 11 C0I C02 C12 C 0 1 N N N 18.857 48.243 36.472 1.605 4.793 -2.247 C02 C0I 12 C0I C03 C13 C 0 1 N N N 19.045 47.157 35.411 0.482 3.754 -2.317 C03 C0I 13 C0I C04 C14 C 0 1 N N N 17.733 46.359 35.273 -0.724 4.259 -1.521 C04 C0I 14 C0I C05 C15 C 0 1 N N N 17.098 46.748 37.557 0.714 5.517 -0.030 C05 C0I 15 C0I C06 C16 C 0 1 N N N 19.467 46.764 38.489 2.476 3.776 -0.159 C06 C0I 16 C0I C07 C17 C 0 1 N N N 16.173 44.876 36.235 -1.494 4.842 0.698 C07 C0I 17 C0I C08 C18 C 0 1 Y N N 16.144 43.751 37.213 -2.429 3.663 0.779 C08 C0I 18 C0I C09 C19 C 0 1 Y N N 17.260 41.838 38.250 -3.135 1.653 1.873 C09 C0I 19 C0I C11 C20 C 0 1 Y N N 15.017 43.534 38.016 -3.431 3.513 -0.164 C11 C0I 20 C0I C12 C21 C 0 1 Y N N 15.021 42.459 38.924 -4.291 2.437 -0.096 C12 C0I 21 C0I C14 C22 C 0 1 N N N 20.606 44.628 39.109 4.073 1.939 -0.055 C14 C0I 22 C0I C16 C23 C 0 1 N N N 20.815 42.135 39.318 5.841 0.177 -0.176 C16 C0I 23 C0I C18 C24 C 0 1 N N N 16.139 40.466 40.021 -5.069 0.343 1.008 C18 C0I 24 C0I C19 C25 C 0 1 N N N 15.008 39.234 42.063 -6.959 -0.949 0.173 C19 C0I 25 C0I C23 C26 C 0 1 Y N N 13.723 41.156 44.681 -10.123 -2.148 -0.083 C23 C0I 26 C0I C25 C27 C 0 1 Y N N 23.236 39.764 42.586 7.410 -3.923 -0.347 C25 C0I 27 C0I C27 C28 C 0 1 Y N N 21.794 39.079 40.298 8.502 -1.554 0.533 C27 C0I 28 C0I C29 C29 C 0 1 Y N N 23.984 40.021 43.816 6.853 -5.132 -0.797 C29 C0I 29 C0I C30 C30 C 0 1 Y N N 23.596 42.063 41.890 5.885 -2.720 -1.819 C30 C0I 30 C0I C31 C31 C 0 1 Y N N 24.500 41.301 44.038 5.853 -5.114 -1.721 C31 C0I 31 C0I C32 C32 C 0 1 Y N N 24.284 42.327 43.066 5.369 -3.912 -2.232 C32 C0I 32 C0I C33 C33 C 0 1 N N N 21.002 38.612 39.083 9.099 -0.252 0.997 C33 C0I 33 C0I C34 C34 C 0 1 N N N 21.540 36.671 41.173 10.017 -2.911 2.040 C34 C0I 34 C0I C35 C35 C 0 1 N N N 20.436 36.405 40.088 10.831 -1.623 2.127 C35 C0I 35 C0I C36 C36 C 0 1 N N N 20.853 37.076 38.807 9.863 -0.447 2.305 C36 C0I 36 C0I C37 C37 C 0 1 Y N N 13.561 43.286 45.944 -11.834 -3.807 0.306 C37 C0I 37 C0I C38 C38 C 0 1 Y N N 14.209 40.567 45.864 -10.771 -1.280 0.798 C38 C0I 38 C0I C39 C39 C 0 1 Y N N 14.387 41.281 47.035 -11.925 -1.676 1.414 C39 C0I 39 C0I C40 C40 C 0 1 Y N N 14.045 42.683 47.064 -12.457 -2.935 1.172 C40 C0I 40 C0I N01 N1 N 0 1 N N N 17.387 45.680 36.548 -0.330 4.489 -0.125 N01 C0I 41 C0I N02 N2 N 0 1 N N N 19.552 45.392 38.441 3.574 3.176 -0.660 N02 C0I 42 C0I N03 N3 N 0 1 N N N 22.057 41.404 39.463 7.038 -0.273 -0.899 N03 C0I 43 C0I N04 N4 N 0 1 N N N 15.197 40.313 41.057 -6.050 0.197 0.095 N04 C0I 44 C0I N05 N5 N 0 1 Y N N 12.935 42.909 43.487 -9.818 -4.051 -1.224 N05 C0I 45 C0I N06 N6 N 0 1 Y N N 22.750 38.446 42.436 8.389 -3.906 0.558 N06 C0I 46 C0I O01 O1 O 0 1 N N N 20.377 47.332 39.149 1.901 3.291 0.793 O01 C0I 47 C0I O02 O2 O 0 1 N N N 16.983 39.538 39.878 -4.939 -0.477 1.896 O02 C0I 48 C0I H1 H1 H 0 1 N N N 18.121 43.085 36.724 -1.495 2.855 2.524 H1 C0I 49 C0I H2 H2 H 0 1 N N N 20.262 43.211 37.538 5.066 1.287 -1.852 H2 C0I 50 C0I H3 H3 H 0 1 N N N 21.982 43.395 38.021 6.090 2.239 -0.750 H3 C0I 51 C0I H4 H4 H 0 1 N N N 12.834 39.244 41.940 -7.442 -0.896 -1.926 H4 C0I 52 C0I H5 H5 H 0 1 N N N 13.485 38.617 43.492 -8.543 0.048 -0.894 H5 C0I 53 C0I H6 H6 H 0 1 N N N 12.642 41.825 41.583 -7.975 -3.467 -2.224 H6 C0I 54 C0I H7 H7 H 0 1 N N N 18.108 48.442 38.493 2.732 5.818 -0.723 H7 C0I 55 C0I H8 H8 H 0 1 N N N 19.814 48.760 36.633 1.270 5.722 -2.708 H8 C0I 56 C0I H9 H9 H 0 1 N N N 18.105 48.965 36.121 2.481 4.419 -2.776 H9 C0I 57 C0I H10 H10 H 0 1 N N N 19.858 46.481 35.715 0.193 3.599 -3.356 H10 C0I 58 C0I H11 H11 H 0 1 N N N 19.297 47.623 34.447 0.830 2.813 -1.891 H11 C0I 59 C0I H12 H12 H 0 1 N N N 16.920 47.048 35.000 -1.080 5.193 -1.956 H12 C0I 60 C0I H13 H13 H 0 1 N N N 17.853 45.602 34.484 -1.520 3.516 -1.557 H13 C0I 61 C0I H14 H14 H 0 1 N N N 16.288 47.391 37.182 0.963 5.687 1.018 H14 C0I 62 C0I H15 H15 H 0 1 N N N 16.787 46.279 38.502 0.351 6.445 -0.472 H15 C0I 63 C0I H16 H16 H 0 1 N N N 15.270 45.495 36.341 -2.014 5.688 0.249 H16 C0I 64 C0I H17 H17 H 0 1 N N N 16.231 44.485 35.208 -1.161 5.110 1.701 H17 C0I 65 C0I H18 H18 H 0 1 N N N 18.126 41.196 38.318 -3.016 0.927 2.664 H18 C0I 66 C0I H19 H19 H 0 1 N N N 14.157 44.183 37.939 -3.541 4.241 -0.954 H19 C0I 67 C0I H20 H20 H 0 1 N N N 14.143 42.280 39.527 -5.073 2.321 -0.832 H20 C0I 68 C0I H21 H21 H 0 1 N N N 20.270 44.383 40.127 3.303 1.169 -0.113 H21 C0I 69 C0I H22 H22 H 0 1 N N N 21.511 45.251 39.161 4.326 2.121 0.989 H22 C0I 70 C0I H23 H23 H 0 1 N N N 20.497 42.489 40.310 6.094 0.360 0.868 H23 C0I 71 C0I H24 H24 H 0 1 N N N 20.052 41.456 38.909 5.071 -0.592 -0.234 H24 C0I 72 C0I H25 H25 H 0 1 N N N 15.081 38.253 41.570 -7.487 -0.929 1.126 H25 C0I 73 C0I H26 H26 H 0 1 N N N 15.784 39.313 42.838 -6.386 -1.873 0.094 H26 C0I 74 C0I H27 H27 H 0 1 N N N 24.135 39.235 44.541 7.218 -6.073 -0.412 H27 C0I 75 C0I H28 H28 H 0 1 N N N 23.472 42.837 41.147 5.502 -1.794 -2.221 H28 C0I 76 C0I H29 H29 H 0 1 N N N 25.058 41.514 44.938 5.428 -6.046 -2.063 H29 C0I 77 C0I H30 H30 H 0 1 N N N 24.662 43.322 43.250 4.575 -3.925 -2.964 H30 C0I 78 C0I H31 H31 H 0 1 N N N 21.484 39.052 38.197 9.783 0.122 0.234 H31 C0I 79 C0I H32 H32 H 0 1 N N N 19.985 39.019 39.187 8.302 0.475 1.152 H32 C0I 80 C0I H33 H33 H 0 1 N N N 21.132 36.367 42.148 9.565 -3.117 3.011 H33 C0I 81 C0I H34 H34 H 0 1 N N N 22.410 36.043 40.928 10.677 -3.735 1.770 H34 C0I 82 C0I H35 H35 H 0 1 N N N 19.475 36.819 40.428 11.507 -1.673 2.981 H35 C0I 83 C0I H36 H36 H 0 1 N N N 20.331 35.323 39.923 11.408 -1.491 1.212 H36 C0I 84 C0I H37 H37 H 0 1 N N N 20.089 36.909 38.034 10.423 0.457 2.542 H37 C0I 85 C0I H38 H38 H 0 1 N N N 21.815 36.664 38.467 9.162 -0.668 3.110 H38 C0I 86 C0I H39 H39 H 0 1 N N N 13.299 44.333 45.973 -12.257 -4.784 0.124 H39 C0I 87 C0I H40 H40 H 0 1 N N N 14.453 39.515 45.857 -10.363 -0.299 0.991 H40 C0I 88 C0I H41 H41 H 0 1 N N N 14.777 40.795 47.917 -12.426 -1.004 2.095 H41 C0I 89 C0I H42 H42 H 0 1 N N N 14.173 43.252 47.973 -13.370 -3.233 1.666 H42 C0I 90 C0I H44 H44 H 0 1 N N N 18.858 44.891 37.923 4.033 3.563 -1.421 H44 C0I 91 C0I H45 H45 H 0 1 N N N 22.214 40.960 38.581 6.864 -0.321 -1.891 H45 C0I 92 C0I H46 H46 H 0 1 N N N 14.539 41.062 41.129 -6.153 0.851 -0.614 H46 C0I 93 C0I H47 H47 H 0 1 N N N 12.631 43.825 43.224 -9.943 -4.948 -1.572 H47 C0I 94 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal C0I C04 C03 SING N N 1 C0I C04 N01 SING N N 2 C0I C03 C02 SING N N 3 C0I C07 N01 SING N N 4 C0I C07 C08 SING N N 5 C0I C02 C01 SING N N 6 C0I N01 C05 SING N N 7 C0I C08 C10 DOUB Y N 8 C0I C08 C11 SING Y N 9 C0I C10 C09 SING Y N 10 C0I C05 C01 SING N N 11 C0I C01 C06 SING N N 12 C0I C11 C12 DOUB Y N 13 C0I C09 C13 DOUB Y N 14 C0I C15 C14 SING N N 15 C0I C15 C16 SING N N 16 C0I N02 C06 SING N N 17 C0I N02 C14 SING N N 18 C0I C06 O01 DOUB N N 19 C0I C36 C33 SING N N 20 C0I C36 C35 SING N N 21 C0I C12 C13 SING Y N 22 C0I C13 C18 SING N N 23 C0I C33 C27 SING N N 24 C0I C16 N03 SING N N 25 C0I N03 C17 SING N N 26 C0I O02 C18 DOUB N N 27 C0I C18 N04 SING N N 28 C0I C35 C34 SING N N 29 C0I C27 C17 DOUB Y N 30 C0I C27 C26 SING Y N 31 C0I C17 C28 SING Y N 32 C0I N04 C19 SING N N 33 C0I C34 C26 SING N N 34 C0I C26 N06 DOUB Y N 35 C0I C28 C30 DOUB Y N 36 C0I C28 C25 SING Y N 37 C0I C30 C32 SING Y N 38 C0I C19 C20 SING N N 39 C0I N06 C25 SING Y N 40 C0I C25 C29 DOUB Y N 41 C0I C22 C21 DOUB Y N 42 C0I C22 N05 SING Y N 43 C0I C20 C21 SING N N 44 C0I C32 C31 DOUB Y N 45 C0I C21 C23 SING Y N 46 C0I N05 C24 SING Y N 47 C0I C29 C31 SING Y N 48 C0I C23 C24 DOUB Y N 49 C0I C23 C38 SING Y N 50 C0I C24 C37 SING Y N 51 C0I C38 C39 DOUB Y N 52 C0I C37 C40 DOUB Y N 53 C0I C39 C40 SING Y N 54 C0I C10 H1 SING N N 55 C0I C15 H2 SING N N 56 C0I C15 H3 SING N N 57 C0I C20 H4 SING N N 58 C0I C20 H5 SING N N 59 C0I C22 H6 SING N N 60 C0I C01 H7 SING N N 61 C0I C02 H8 SING N N 62 C0I C02 H9 SING N N 63 C0I C03 H10 SING N N 64 C0I C03 H11 SING N N 65 C0I C04 H12 SING N N 66 C0I C04 H13 SING N N 67 C0I C05 H14 SING N N 68 C0I C05 H15 SING N N 69 C0I C07 H16 SING N N 70 C0I C07 H17 SING N N 71 C0I C09 H18 SING N N 72 C0I C11 H19 SING N N 73 C0I C12 H20 SING N N 74 C0I C14 H21 SING N N 75 C0I C14 H22 SING N N 76 C0I C16 H23 SING N N 77 C0I C16 H24 SING N N 78 C0I C19 H25 SING N N 79 C0I C19 H26 SING N N 80 C0I C29 H27 SING N N 81 C0I C30 H28 SING N N 82 C0I C31 H29 SING N N 83 C0I C32 H30 SING N N 84 C0I C33 H31 SING N N 85 C0I C33 H32 SING N N 86 C0I C34 H33 SING N N 87 C0I C34 H34 SING N N 88 C0I C35 H35 SING N N 89 C0I C35 H36 SING N N 90 C0I C36 H37 SING N N 91 C0I C36 H38 SING N N 92 C0I C37 H39 SING N N 93 C0I C38 H40 SING N N 94 C0I C39 H41 SING N N 95 C0I C40 H42 SING N N 96 C0I N02 H44 SING N N 97 C0I N03 H45 SING N N 98 C0I N04 H46 SING N N 99 C0I N05 H47 SING N N 100 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor C0I InChI InChI 1.06 "InChI=1S/C40H46N6O2/c47-39(43-23-20-30-25-44-35-13-4-1-10-32(30)35)29-18-16-28(17-19-29)26-46-24-7-9-31(27-46)40(48)42-22-8-21-41-38-33-11-2-5-14-36(33)45-37-15-6-3-12-34(37)38/h1-2,4-5,10-11,13-14,16-19,25,31,44H,3,6-9,12,15,20-24,26-27H2,(H,41,45)(H,42,48)(H,43,47)/t31-/m0/s1" C0I InChIKey InChI 1.06 XQXLUAZIHQBRBM-HKBQPEDESA-N C0I SMILES_CANONICAL CACTVS 3.385 "O=C(NCCCNc1c2CCCCc2nc3ccccc13)[C@H]4CCCN(C4)Cc5ccc(cc5)C(=O)NCCc6c[nH]c7ccccc67" C0I SMILES CACTVS 3.385 "O=C(NCCCNc1c2CCCCc2nc3ccccc13)[CH]4CCCN(C4)Cc5ccc(cc5)C(=O)NCCc6c[nH]c7ccccc67" C0I SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)c(c[nH]2)CCNC(=O)c3ccc(cc3)CN4CCC[C@@H](C4)C(=O)NCCCNc5c6ccccc6nc7c5CCCC7" C0I SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)c(c[nH]2)CCNC(=O)c3ccc(cc3)CN4CCCC(C4)C(=O)NCCCNc5c6ccccc6nc7c5CCCC7" # _pdbx_chem_comp_identifier.comp_id C0I _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{S})-1-[[4-[2-(1~{H}-indol-3-yl)ethylcarbamoyl]phenyl]methyl]-~{N}-[3-(1,2,3,4-tetrahydroacridin-9-ylamino)propyl]piperidine-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site C0I "Create component" 2021-12-14 PDBE C0I "Modify descriptor" 2022-08-22 RCSB C0I "Initial release" 2022-12-21 RCSB #