data_C54 # _chem_comp.id C54 _chem_comp.name "(1R)-cyclopent-2-ene-1-carboxylic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C6 H8 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-03-15 _chem_comp.pdbx_modified_date 2014-09-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 112.127 _chem_comp.one_letter_code ? _chem_comp.three_letter_code C54 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4AMY _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal C54 C C C 0 1 N N N 39.402 37.912 83.715 -1.347 -0.104 -0.030 C C54 1 C54 O O O 0 1 N N N 39.699 39.082 84.027 -1.635 -1.122 0.554 O C54 2 C54 CA CA C 0 1 N N R 39.744 36.774 84.632 0.040 0.077 -0.590 CA C54 3 C54 CB CB C 0 1 N N N 38.472 36.411 85.404 0.908 -1.168 -0.294 CB C54 4 C54 CG CG C 0 1 N N N 38.822 36.405 86.896 2.287 -0.523 -0.026 CG C54 5 C54 CD CD C 0 1 N N N 40.219 37.000 86.939 1.972 0.887 0.418 CD C54 6 C54 CN CN C 0 1 N N N 40.711 37.148 85.709 0.747 1.214 0.111 CN C54 7 C54 HA HA H 0 1 N N N 40.107 35.907 84.061 -0.006 0.260 -1.664 HA C54 8 C54 HB2 HB2 H 0 1 N N N 37.687 37.156 85.206 0.545 -1.696 0.588 HB2 C54 9 C54 HB3 HB3 H 0 1 N N N 38.118 35.415 85.098 0.947 -1.832 -1.157 HB3 C54 10 C54 HG2 HG2 H 0 1 N N N 38.114 37.023 87.468 2.812 -1.061 0.763 HG2 C54 11 C54 HG3 HG3 H 0 1 N N N 38.819 35.380 87.296 2.883 -0.509 -0.939 HG3 C54 12 C54 HD2 HD2 H 0 1 N N N 40.743 37.267 87.845 2.670 1.538 0.924 HD2 C54 13 C54 OXT OXT O 0 1 N Y N ? ? ? -2.265 0.863 -0.184 OXT C54 14 C54 HXT HXT H 0 1 N Y N ? ? ? -3.142 0.700 0.189 HXT C54 15 C54 HN HN H 0 1 N Y N 41.711 37.504 85.510 0.297 2.171 0.328 HN C54 16 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal C54 C O DOUB N N 1 C54 C CA SING N N 2 C54 CA CB SING N N 3 C54 CA CN SING N N 4 C54 CB CG SING N N 5 C54 CG CD SING N N 6 C54 CD CN DOUB N N 7 C54 CA HA SING N N 8 C54 CB HB2 SING N N 9 C54 CB HB3 SING N N 10 C54 CG HG2 SING N N 11 C54 CG HG3 SING N N 12 C54 CD HD2 SING N N 13 C54 C OXT SING N N 14 C54 OXT HXT SING N N 15 C54 CN HN SING N N 16 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor C54 SMILES ACDLabs 12.01 "O=C(O)C1C=CCC1" C54 InChI InChI 1.03 "InChI=1S/C6H8O2/c7-6(8)5-3-1-2-4-5/h1,3,5H,2,4H2,(H,7,8)/t5-/m0/s1" C54 InChIKey InChI 1.03 MOMBAXHNIPLMSI-YFKPBYRVSA-N C54 SMILES_CANONICAL CACTVS 3.385 "OC(=O)[C@@H]1CCC=C1" C54 SMILES CACTVS 3.385 "OC(=O)[CH]1CCC=C1" C54 SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "C1C[C@H](C=C1)C(=O)O" C54 SMILES "OpenEye OEToolkits" 1.9.2 "C1CC(C=C1)C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier C54 "SYSTEMATIC NAME" ACDLabs 12.01 "(1R)-cyclopent-2-ene-1-carboxylic acid" C54 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "(1R)-cyclopent-2-ene-1-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site C54 "Create component" 2012-03-15 EBI C54 "Modify descriptor" 2014-09-05 RCSB #