data_C55 # _chem_comp.id C55 _chem_comp.name "(7E)-4,9-dioxo-6-oxa-3,7,10-triazadodec-7-ene-1,12-dioic acid " _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C8 H11 N3 O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-02-15 _chem_comp.pdbx_modified_date 2024-02-16 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 261.189 _chem_comp.one_letter_code ? _chem_comp.three_letter_code C55 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1K09 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal C55 C1 C1 C 0 1 N N N N N N 2.365 10.345 -16.169 6.623 -0.308 0.001 C1 C55 1 C55 C2 C2 C 0 1 N N N N N N 0.912 10.088 -15.763 5.458 0.647 0.000 C2 C55 2 C55 C3 C3 C 0 1 N N N N N N -0.602 8.200 -15.692 3.024 0.539 0.000 C3 C55 3 C55 C4 C4 C 0 1 N N N N N N -0.687 6.828 -15.817 1.761 -0.226 0.001 C4 C55 4 C55 N1 N1 N 0 1 N N N N N N 0.617 8.631 -15.861 4.205 -0.111 0.001 N1 C55 5 C55 O2 O1 O 0 1 N N N N N N 3.000 9.518 -16.793 6.427 -1.501 -0.003 O2 C55 6 C55 O3 O2 O 0 1 N N N N N N -1.559 8.909 -15.453 2.999 1.754 -0.001 O3 C55 7 C55 CH C5 C 0 1 N N N N N N -4.850 -0.106 -13.710 -6.635 0.161 -0.000 CH C55 8 C55 OI O3 O 0 1 N N N N N N -5.514 0.224 -12.747 -6.533 1.365 -0.001 OI C55 9 C55 CI C6 C 0 1 N N N N N N -4.551 0.880 -14.842 -5.398 -0.699 0.000 CI C55 10 C55 NJ N2 N 0 1 N N N N N N -3.587 1.912 -14.362 -4.208 0.156 -0.000 NJ C55 11 C55 CK C7 C 0 1 N N N N N N -3.341 2.964 -15.095 -2.980 -0.399 0.000 CK C55 12 C55 OL O4 O 0 1 N N N N N N -3.885 3.126 -16.169 -2.859 -1.606 0.001 OL C55 13 C55 CL C8 C 0 1 N N N N N N -2.343 3.987 -14.547 -1.756 0.481 -0.000 CL C55 14 C55 OM O5 O 0 1 N N N N N N -2.206 5.054 -15.474 -0.583 -0.335 0.001 OM C55 15 C55 NM N3 N 0 1 N N N N N N -1.283 6.017 -14.986 0.629 0.398 0.000 NM C55 16 C55 O1 O6 O 0 1 N Y N N N N 2.896 11.484 -15.821 7.879 0.165 0.001 O1 C55 17 C55 O4 O7 O 0 1 N Y N N N N -4.364 -1.312 -13.817 -7.850 -0.410 -0.000 O4 C55 18 C55 HC22 H1 H 0 0 N N N N N N 0.756 10.424 -14.727 5.503 1.275 0.890 HC22 C55 19 C55 HC21 H2 H 0 0 N N N N N N 0.240 10.644 -16.434 5.503 1.274 -0.890 HC21 C55 20 C55 HC43 H3 H 0 0 N N N N N N -0.217 6.385 -16.682 1.783 -1.305 0.001 HC43 C55 21 C55 HN1 H4 H 0 1 N N N N N N 1.354 7.984 -16.056 4.225 -1.081 0.001 HN1 C55 22 C55 HI1 H5 H 0 1 N N N N N N -5.484 1.369 -15.158 -5.393 -1.328 0.891 HI1 C55 23 C55 HI2 H6 H 0 1 N N N N N N -4.114 0.338 -15.694 -5.393 -1.329 -0.889 HI2 C55 24 C55 HNJ H7 H 0 1 N N N N N N -3.130 1.798 -13.480 -4.305 1.121 -0.001 HNJ C55 25 C55 HL1 H8 H 0 1 N N N N N N -1.367 3.503 -14.397 -1.761 1.109 -0.891 HL1 C55 26 C55 HL2 H9 H 0 1 N N N N N N -2.709 4.379 -13.587 -1.761 1.110 0.889 HL2 C55 27 C55 H1 H10 H 0 1 N N N N N N 3.794 11.523 -16.129 8.594 -0.487 0.001 H1 C55 28 C55 H2 H11 H 0 1 N N N N N N -4.616 -1.824 -13.057 -8.613 0.183 -0.001 H2 C55 29 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal C55 O2 C1 DOUB N N 1 C55 C1 C2 SING N N 2 C55 OL CK DOUB N N 3 C55 N1 C2 SING N N 4 C55 N1 C3 SING N N 5 C55 C4 C3 SING N N 6 C55 C4 NM DOUB N E 7 C55 C3 O3 DOUB N N 8 C55 OM NM SING N N 9 C55 OM CL SING N N 10 C55 CK CL SING N N 11 C55 CK NJ SING N N 12 C55 CI NJ SING N N 13 C55 CI CH SING N N 14 C55 CH OI DOUB N N 15 C55 C1 O1 SING N N 16 C55 CH O4 SING N N 17 C55 C2 HC22 SING N N 18 C55 C2 HC21 SING N N 19 C55 C4 HC43 SING N N 20 C55 N1 HN1 SING N N 21 C55 CI HI1 SING N N 22 C55 CI HI2 SING N N 23 C55 NJ HNJ SING N N 24 C55 CL HL1 SING N N 25 C55 CL HL2 SING N N 26 C55 O1 H1 SING N N 27 C55 O4 H2 SING N N 28 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor C55 SMILES ACDLabs 12.01 "O=C(CO/N=C/C(=O)NCC(=O)O)NCC(=O)O" C55 InChI InChI 1.06 "InChI=1S/C8H11N3O7/c12-5(9-2-7(14)15)1-11-18-4-6(13)10-3-8(16)17/h1H,2-4H2,(H,9,12)(H,10,13)(H,14,15)(H,16,17)/b11-1+" C55 InChIKey InChI 1.06 XMSCOUQNHLJSRL-QQDOKKFESA-N C55 SMILES_CANONICAL CACTVS 3.385 "OC(=O)CNC(=O)CO/N=C/C(=O)NCC(O)=O" C55 SMILES CACTVS 3.385 "OC(=O)CNC(=O)CON=CC(=O)NCC(O)=O" C55 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "C(C(=O)O)NC(=O)CON=CC(=O)NCC(=O)O" C55 SMILES "OpenEye OEToolkits" 3.1.0.0 "C(C(=O)O)NC(=O)CON=CC(=O)NCC(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier C55 "SYSTEMATIC NAME" ACDLabs 12.01 "(7E)-4,9-dioxo-6-oxa-3,7,10-triazadodec-7-ene-1,12-dioic acid (non-preferred name)" C55 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "2-[2-[[2-(2-hydroxy-2-oxoethylamino)-2-oxidanylidene-ethylidene]amino]oxyethanoylamino]ethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site C55 "Create component" 2024-02-15 RCSB C55 "Initial release" 2024-02-21 RCSB #