data_C8H # _chem_comp.id C8H _chem_comp.name "(3~{S},6~{S})-1,4-dimethyl-3-[(4-nitro-1~{H}-indol-3-yl)methyl]-6-(phenylmethyl)piperazine-2,5-dione" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H22 N4 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-11-18 _chem_comp.pdbx_modified_date 2018-12-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 406.434 _chem_comp.one_letter_code ? _chem_comp.three_letter_code C8H _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6F0B _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal C8H C1 C1 C 0 1 N N N -38.276 1.583 5.267 -1.773 -0.128 -1.099 C1 C8H 1 C8H C2 C2 C 0 1 N N S -37.266 0.487 5.588 -2.485 -1.257 -0.416 C2 C8H 2 C8H C3 C3 C 0 1 N N N -36.906 -0.247 4.287 -3.070 -0.754 0.905 C3 C8H 3 C8H C4 C4 C 0 1 Y N N -38.151 -0.973 3.799 -4.160 0.247 0.623 C4 C8H 4 C8H C5 C5 C 0 1 Y N N -38.509 -2.244 4.319 -5.464 -0.179 0.454 C5 C8H 5 C8H C6 C6 C 0 1 Y N N -39.653 -2.914 3.843 -6.463 0.740 0.195 C6 C8H 6 C8H C7 C7 C 0 1 Y N N -40.456 -2.294 2.862 -6.159 2.085 0.105 C7 C8H 7 C8H C12 C8 C 0 1 N N N -41.007 -0.522 5.935 0.842 -0.306 0.974 C12 C8H 8 C8H C13 C9 C 0 1 Y N N -42.340 -0.506 6.603 1.702 0.908 0.730 C13 C8H 9 C8H C14 C10 C 0 1 Y N N -43.617 -0.157 6.113 3.115 0.912 0.348 C14 C8H 10 C8H O2 O1 O 0 1 N N N -39.113 -1.140 8.182 0.429 -3.205 0.116 O2 C8H 11 C8H C10 C11 C 0 1 N N N -38.870 -0.497 7.172 -0.252 -2.229 -0.119 C10 C8H 12 C8H N2 N1 N 0 1 N N N -37.658 -0.482 6.611 -1.581 -2.367 -0.146 N2 C8H 13 C8H C22 C12 C 0 1 N N N -36.553 -1.342 7.040 -2.153 -3.691 0.107 C22 C8H 14 C8H C8 C13 C 0 1 Y N N -40.111 -1.025 2.356 -4.855 2.512 0.274 C8 C8H 15 C8H C9 C14 C 0 1 Y N N -38.960 -0.372 2.835 -3.856 1.594 0.540 C9 C8H 16 C8H O1 O2 O 0 1 N N N -37.931 2.627 4.643 -2.430 0.695 -1.700 O1 C8H 17 C8H N1 N2 N 0 1 N N N -39.523 1.401 5.644 -0.444 0.011 -1.067 N1 C8H 18 C8H C21 C15 C 0 1 N N N -40.537 2.290 5.124 0.158 1.149 -1.768 C21 C8H 19 C8H C11 C16 C 0 1 N N S -39.966 0.368 6.617 0.432 -0.918 -0.367 C11 C8H 20 C8H C15 C17 C 0 1 Y N N -44.135 0.421 4.955 4.057 -0.089 0.102 C15 C8H 21 C8H N4 N3 N 1 1 N N N -43.403 0.730 3.790 3.674 -1.514 0.219 N4 C8H 22 C8H O3 O3 O 0 1 N N N -44.043 0.785 2.726 4.523 -2.383 0.127 O3 C8H 23 C8H O4 O4 O -1 1 N N N -42.180 0.973 3.755 2.510 -1.818 0.407 O4 C8H 24 C8H C20 C18 C 0 1 Y N N -42.485 -0.966 7.912 1.315 2.191 0.817 C20 C8H 25 C8H N3 N4 N 0 1 Y N N -43.871 -0.905 8.267 2.367 3.016 0.526 N3 C8H 26 C8H C19 C19 C 0 1 Y N N -44.530 -0.409 7.174 3.484 2.265 0.235 C19 C8H 27 C8H C18 C20 C 0 1 Y N N -45.879 -0.095 7.067 4.789 2.588 -0.122 C18 C8H 28 C8H C17 C21 C 0 1 Y N N -46.397 0.451 5.884 5.702 1.585 -0.359 C17 C8H 29 C8H C16 C22 C 0 1 Y N N -45.505 0.689 4.825 5.334 0.251 -0.247 C16 C8H 30 C8H H1 H1 H 0 1 N N N -36.350 0.987 5.935 -3.297 -1.605 -1.055 H1 C8H 31 C8H H2 H2 H 0 1 N N N -36.101 -0.972 4.478 -3.484 -1.595 1.462 H2 C8H 32 C8H H3 H3 H 0 1 N N N -36.575 0.478 3.529 -2.284 -0.280 1.493 H3 C8H 33 C8H H4 H4 H 0 1 N N N -37.900 -2.701 5.085 -5.701 -1.230 0.524 H4 C8H 34 C8H H5 H5 H 0 1 N N N -39.913 -3.891 4.224 -7.482 0.407 0.062 H5 C8H 35 C8H H6 H6 H 0 1 N N N -41.340 -2.795 2.497 -6.940 2.803 -0.098 H6 C8H 36 C8H H7 H7 H 0 1 N N N -40.632 -1.556 5.933 1.405 -1.039 1.551 H7 C8H 37 C8H H8 H8 H 0 1 N N N -41.134 -0.176 4.899 -0.050 -0.014 1.528 H8 C8H 38 C8H H9 H9 H 0 1 N N N -36.911 -2.045 7.806 -2.169 -4.264 -0.820 H9 C8H 39 C8H H10 H10 H 0 1 N N N -36.170 -1.905 6.176 -1.547 -4.214 0.847 H10 C8H 40 C8H H11 H11 H 0 1 N N N -35.747 -0.722 7.459 -3.171 -3.582 0.484 H11 C8H 41 C8H H12 H12 H 0 1 N N N -40.727 -0.555 1.604 -4.618 3.563 0.209 H12 C8H 42 C8H H13 H13 H 0 1 N N N -38.701 0.604 2.452 -2.838 1.927 0.672 H13 C8H 43 C8H H14 H14 H 0 1 N N N -41.518 2.007 5.532 -0.630 1.793 -2.158 H14 C8H 44 C8H H15 H15 H 0 1 N N N -40.303 3.324 5.417 0.780 1.715 -1.075 H15 C8H 45 C8H H16 H16 H 0 1 N N N -40.561 2.216 4.027 0.771 0.784 -2.592 H16 C8H 46 C8H H17 H17 H 0 1 N N N -40.459 0.876 7.459 1.325 -1.090 -0.968 H17 C8H 47 C8H H18 H18 H 0 1 N N N -41.685 -1.311 8.551 0.321 2.522 1.077 H18 C8H 48 C8H H19 H19 H 0 1 N N N -44.277 -1.172 9.141 2.331 3.985 0.523 H19 C8H 49 C8H H20 H20 H 0 1 N N N -46.537 -0.274 7.905 5.086 3.623 -0.212 H20 C8H 50 C8H H21 H21 H 0 1 N N N -47.448 0.681 5.790 6.715 1.838 -0.636 H21 C8H 51 C8H H22 H22 H 0 1 N N N -45.882 1.086 3.894 6.062 -0.524 -0.437 H22 C8H 52 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal C8H C8 C9 DOUB Y N 1 C8H C8 C7 SING Y N 2 C8H O3 N4 DOUB N N 3 C8H C9 C4 SING Y N 4 C8H C7 C6 DOUB Y N 5 C8H O4 N4 SING N N 6 C8H N4 C15 SING N N 7 C8H C4 C3 SING N N 8 C8H C4 C5 DOUB Y N 9 C8H C6 C5 SING Y N 10 C8H C3 C2 SING N N 11 C8H O1 C1 DOUB N N 12 C8H C16 C15 DOUB Y N 13 C8H C16 C17 SING Y N 14 C8H C15 C14 SING Y N 15 C8H C21 N1 SING N N 16 C8H C1 C2 SING N N 17 C8H C1 N1 SING N N 18 C8H C2 N2 SING N N 19 C8H N1 C11 SING N N 20 C8H C17 C18 DOUB Y N 21 C8H C12 C13 SING N N 22 C8H C12 C11 SING N N 23 C8H C14 C13 SING Y N 24 C8H C14 C19 DOUB Y N 25 C8H C13 C20 DOUB Y N 26 C8H N2 C22 SING N N 27 C8H N2 C10 SING N N 28 C8H C11 C10 SING N N 29 C8H C18 C19 SING Y N 30 C8H C10 O2 DOUB N N 31 C8H C19 N3 SING Y N 32 C8H C20 N3 SING Y N 33 C8H C2 H1 SING N N 34 C8H C3 H2 SING N N 35 C8H C3 H3 SING N N 36 C8H C5 H4 SING N N 37 C8H C6 H5 SING N N 38 C8H C7 H6 SING N N 39 C8H C12 H7 SING N N 40 C8H C12 H8 SING N N 41 C8H C22 H9 SING N N 42 C8H C22 H10 SING N N 43 C8H C22 H11 SING N N 44 C8H C8 H12 SING N N 45 C8H C9 H13 SING N N 46 C8H C21 H14 SING N N 47 C8H C21 H15 SING N N 48 C8H C21 H16 SING N N 49 C8H C11 H17 SING N N 50 C8H C20 H18 SING N N 51 C8H N3 H19 SING N N 52 C8H C18 H20 SING N N 53 C8H C17 H21 SING N N 54 C8H C16 H22 SING N N 55 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor C8H InChI InChI 1.03 "InChI=1S/C22H22N4O4/c1-24-18(11-14-7-4-3-5-8-14)21(27)25(2)19(22(24)28)12-15-13-23-16-9-6-10-17(20(15)16)26(29)30/h3-10,13,18-19,23H,11-12H2,1-2H3/t18-,19-/m0/s1" C8H InChIKey InChI 1.03 GJJXGBLNXDIHIQ-OALUTQOASA-N C8H SMILES_CANONICAL CACTVS 3.385 "CN1[C@@H](Cc2ccccc2)C(=O)N(C)[C@@H](Cc3c[nH]c4cccc(c34)[N+]([O-])=O)C1=O" C8H SMILES CACTVS 3.385 "CN1[CH](Cc2ccccc2)C(=O)N(C)[CH](Cc3c[nH]c4cccc(c34)[N+]([O-])=O)C1=O" C8H SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CN1[C@H](C(=O)N([C@H](C1=O)Cc2c[nH]c3c2c(ccc3)[N+](=O)[O-])C)Cc4ccccc4" C8H SMILES "OpenEye OEToolkits" 2.0.6 "CN1C(C(=O)N(C(C1=O)Cc2c[nH]c3c2c(ccc3)[N+](=O)[O-])C)Cc4ccccc4" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier C8H "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(3~{S},6~{S})-1,4-dimethyl-3-[(4-nitro-1~{H}-indol-3-yl)methyl]-6-(phenylmethyl)piperazine-2,5-dione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site C8H "Create component" 2017-11-18 EBI C8H "Initial release" 2018-12-12 RCSB #