data_CD9 # _chem_comp.id CD9 _chem_comp.name "5-[(6-chloro-2-oxo-2,3-dihydro-1H-indol-1-yl)methyl]-1,3-benzodioxole-4-carboxylic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H12 Cl N O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-07-05 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 345.734 _chem_comp.one_letter_code ? _chem_comp.three_letter_code CD9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3NF9 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal CD9 C1 C1 C 0 1 Y N N 5.139 -28.494 -8.698 4.671 0.579 0.618 C1 CD9 1 CD9 C2 C2 C 0 1 Y N N 6.294 -29.141 -9.108 3.743 1.298 -0.116 C2 CD9 2 CD9 C3 C3 C 0 1 Y N N 7.401 -28.415 -9.472 2.540 0.722 -0.475 C3 CD9 3 CD9 C4 C4 C 0 1 Y N N 7.307 -27.048 -9.403 2.254 -0.589 -0.101 C4 CD9 4 CD9 C5 C5 C 0 1 Y N N 6.179 -26.391 -8.990 3.194 -1.299 0.635 C5 CD9 5 CD9 C6 C6 C 0 1 Y N N 5.065 -27.114 -8.632 4.392 -0.723 0.992 C6 CD9 6 CD9 C7 C7 C 0 1 N N N 6.394 -24.921 -9.052 2.597 -2.666 0.880 C7 CD9 7 CD9 C8 C8 C 0 1 N N N 7.818 -24.846 -9.574 1.246 -2.606 0.199 C8 CD9 8 CD9 O9 O9 O 0 1 N N N 8.421 -23.811 -9.815 0.425 -3.497 0.149 O9 CD9 9 CD9 N10 N10 N 0 1 N N N 8.298 -26.134 -9.736 1.129 -1.380 -0.338 N10 CD9 10 CD9 C11 C11 C 0 1 N N N 9.641 -26.554 -10.031 -0.046 -0.926 -1.086 C11 CD9 11 CD9 C12 C12 C 0 1 Y N N 9.964 -26.667 -11.491 -1.078 -0.394 -0.126 C12 CD9 12 CD9 C13 C13 C 0 1 Y N N 8.983 -26.903 -12.446 -0.780 -0.282 1.214 C13 CD9 13 CD9 C14 C14 C 0 1 Y N N 9.277 -27.028 -13.804 -1.724 0.207 2.102 C14 CD9 14 CD9 C15 C15 C 0 1 Y N N 10.593 -26.900 -14.213 -2.977 0.588 1.654 C15 CD9 15 CD9 C16 C16 C 0 1 Y N N 11.564 -26.662 -13.295 -3.293 0.481 0.302 C16 CD9 16 CD9 C17 C17 C 0 1 Y N N 11.273 -26.549 -11.946 -2.338 -0.008 -0.597 C17 CD9 17 CD9 C18 C18 C 0 1 N N N 12.406 -26.326 -11.054 -2.661 -0.126 -2.030 C18 CD9 18 CD9 O19 O19 O 0 1 N N N 13.376 -25.711 -11.582 -3.285 -1.228 -2.491 O19 CD9 19 CD9 O20 O20 O 0 1 N N N 12.284 -26.852 -9.897 -2.365 0.770 -2.796 O20 CD9 20 CD9 O21 O21 O 0 1 N N N 12.813 -26.552 -13.862 -4.571 0.914 0.116 O21 CD9 21 CD9 C22 C22 C 0 1 N N N 12.488 -26.596 -15.270 -4.897 1.670 1.297 C22 CD9 22 CD9 O23 O23 O 0 1 N N N 11.121 -26.971 -15.506 -4.060 1.090 2.316 O23 CD9 23 CD9 CL24 CL24 CL 0 0 N N N 6.457 -30.875 -9.199 4.092 2.932 -0.586 CL24 CD9 24 CD9 H1 H1 H 0 1 N N N 4.275 -29.082 -8.423 5.612 1.032 0.893 H1 CD9 25 CD9 H3 H3 H 0 1 N N N 8.309 -28.900 -9.799 1.821 1.289 -1.047 H3 CD9 26 CD9 H6 H6 H 0 1 N N N 4.161 -26.620 -8.309 5.116 -1.289 1.561 H6 CD9 27 CD9 H17 H17 H 0 1 N N N 6.286 -24.443 -8.067 3.218 -3.441 0.429 H17 CD9 28 CD9 H27 H27 H 0 1 N N N 5.678 -24.424 -9.723 2.481 -2.846 1.949 H27 CD9 29 CD9 H111 H111 H 0 0 N N N 9.787 -27.546 -9.579 0.248 -0.137 -1.779 H111 CD9 30 CD9 H211 H211 H 0 0 N N N 10.326 -25.813 -9.594 -0.466 -1.762 -1.645 H211 CD9 31 CD9 H13 H13 H 0 1 N N N 7.956 -26.993 -12.125 0.194 -0.577 1.573 H13 CD9 32 CD9 H14 H14 H 0 1 N N N 8.493 -27.221 -14.522 -1.481 0.290 3.151 H14 CD9 33 CD9 H122 H122 H 0 0 N N N 13.142 -27.335 -15.756 -4.655 2.724 1.157 H122 CD9 34 CD9 H222 H222 H 0 0 N N N 12.654 -25.596 -15.698 -5.951 1.551 1.550 H222 CD9 35 CD9 HO19 HO19 H 0 0 N N N 14.098 -25.669 -10.966 -3.477 -1.260 -3.439 HO19 CD9 36 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal CD9 O23 C22 SING N N 1 CD9 O23 C15 SING N N 2 CD9 C22 O21 SING N N 3 CD9 C15 C14 DOUB Y N 4 CD9 C15 C16 SING Y N 5 CD9 O21 C16 SING N N 6 CD9 C14 C13 SING Y N 7 CD9 C16 C17 DOUB Y N 8 CD9 C13 C12 DOUB Y N 9 CD9 C17 C12 SING Y N 10 CD9 C17 C18 SING N N 11 CD9 O19 C18 SING N N 12 CD9 C12 C11 SING N N 13 CD9 C18 O20 DOUB N N 14 CD9 C11 N10 SING N N 15 CD9 O9 C8 DOUB N N 16 CD9 N10 C8 SING N N 17 CD9 N10 C4 SING N N 18 CD9 C8 C7 SING N N 19 CD9 C3 C4 SING Y N 20 CD9 C3 C2 DOUB Y N 21 CD9 C4 C5 DOUB Y N 22 CD9 CL24 C2 SING N N 23 CD9 C2 C1 SING Y N 24 CD9 C7 C5 SING N N 25 CD9 C5 C6 SING Y N 26 CD9 C1 C6 DOUB Y N 27 CD9 C1 H1 SING N N 28 CD9 C3 H3 SING N N 29 CD9 C6 H6 SING N N 30 CD9 C7 H17 SING N N 31 CD9 C7 H27 SING N N 32 CD9 C11 H111 SING N N 33 CD9 C11 H211 SING N N 34 CD9 C13 H13 SING N N 35 CD9 C14 H14 SING N N 36 CD9 C22 H122 SING N N 37 CD9 C22 H222 SING N N 38 CD9 O19 HO19 SING N N 39 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor CD9 SMILES ACDLabs 12.01 "Clc1ccc2c(c1)N(C(=O)C2)Cc3ccc4OCOc4c3C(=O)O" CD9 SMILES_CANONICAL CACTVS 3.370 "OC(=O)c1c(CN2C(=O)Cc3ccc(Cl)cc23)ccc4OCOc14" CD9 SMILES CACTVS 3.370 "OC(=O)c1c(CN2C(=O)Cc3ccc(Cl)cc23)ccc4OCOc14" CD9 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "c1cc2c(cc1Cl)N(C(=O)C2)Cc3ccc4c(c3C(=O)O)OCO4" CD9 SMILES "OpenEye OEToolkits" 1.7.0 "c1cc2c(cc1Cl)N(C(=O)C2)Cc3ccc4c(c3C(=O)O)OCO4" CD9 InChI InChI 1.03 "InChI=1S/C17H12ClNO5/c18-11-3-1-9-5-14(20)19(12(9)6-11)7-10-2-4-13-16(24-8-23-13)15(10)17(21)22/h1-4,6H,5,7-8H2,(H,21,22)" CD9 InChIKey InChI 1.03 XVKFXTJLVSDWCE-UHFFFAOYSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier CD9 "SYSTEMATIC NAME" ACDLabs 12.01 "5-[(6-chloro-2-oxo-2,3-dihydro-1H-indol-1-yl)methyl]-1,3-benzodioxole-4-carboxylic acid" CD9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "5-[(6-chloro-2-oxo-3H-indol-1-yl)methyl]-1,3-benzodioxole-4-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site CD9 "Create component" 2010-07-05 PDBJ CD9 "Modify aromatic_flag" 2011-06-04 RCSB CD9 "Modify descriptor" 2011-06-04 RCSB #