data_CDT # _chem_comp.id CDT _chem_comp.name "4-METHYLSULFANYL-2-UREIDO-BUTYRIC ACID" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C6 H12 N2 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms N-CARBAMYL-D-METHIONINE _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2003-05-28 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 192.236 _chem_comp.one_letter_code ? _chem_comp.three_letter_code CDT _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1UF5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal CDT NT NT N 0 1 N N N 53.314 80.035 -4.453 2.741 -0.644 -2.170 NT CDT 1 CDT CT CT C 0 1 N N N 52.736 80.295 -3.263 1.640 0.068 -1.856 CT CDT 2 CDT OT OT O 0 1 N N N 52.322 81.424 -3.023 1.483 1.180 -2.322 OT CDT 3 CDT N N N 0 1 N N N 52.608 79.291 -2.350 0.714 -0.452 -1.027 N CDT 4 CDT CA CA C 0 1 N N R 52.092 79.512 -0.981 -0.481 0.322 -0.686 CA CDT 5 CDT CB CB C 0 1 N N N 52.605 78.372 -0.075 -0.953 -0.060 0.717 CB CDT 6 CDT CG CG C 0 1 N N N 52.195 78.557 1.408 0.154 0.240 1.728 CG CDT 7 CDT SD SD S 0 1 N N N 52.916 80.072 2.128 -0.406 -0.214 3.393 SD CDT 8 CDT CE CE C 0 1 N N N 54.681 79.816 1.790 1.063 0.238 4.355 CE CDT 9 CDT C C C 0 1 N N N 50.570 79.531 -0.996 -1.572 0.026 -1.682 C CDT 10 CDT O O O 0 1 N N N 49.946 78.745 -1.678 -2.393 0.871 -1.947 O CDT 11 CDT OXT OXT O 0 1 N N N 49.926 80.423 -0.245 -1.631 -1.176 -2.274 OXT CDT 12 CDT HT1 1HT H 0 1 N N N 53.658 79.095 -4.652 3.407 -0.270 -2.767 HT1 CDT 13 CDT HT2 2HT H 0 1 N N N 54.076 80.697 -4.594 2.866 -1.531 -1.798 HT2 CDT 14 CDT HN1 1HN H 0 1 N N N 52.898 78.374 -2.691 0.840 -1.339 -0.655 HN1 CDT 15 CDT HA HA H 0 1 N N N 52.449 80.493 -0.590 -0.244 1.386 -0.712 HA CDT 16 CDT HB1 1HB H 0 1 N N N 52.278 77.377 -0.459 -1.190 -1.124 0.743 HB1 CDT 17 CDT HB2 2HB H 0 1 N N N 53.708 78.249 -0.172 -1.843 0.515 0.971 HB2 CDT 18 CDT HG1 1HG H 0 1 N N N 51.086 78.538 1.527 0.390 1.304 1.702 HG1 CDT 19 CDT HG2 2HG H 0 1 N N N 52.451 77.657 2.015 1.043 -0.336 1.475 HG2 CDT 20 CDT HE1 1HE H 0 1 N N N 55.121 80.741 2.229 0.888 0.022 5.409 HE1 CDT 21 CDT HE2 2HE H 0 1 N N N 55.106 78.857 2.168 1.919 -0.338 4.003 HE2 CDT 22 CDT HE3 3HE H 0 1 N N N 54.940 79.623 0.722 1.266 1.301 4.230 HE3 CDT 23 CDT HXT HXT H 0 1 N N N 48.976 80.434 -0.254 -2.332 -1.367 -2.913 HXT CDT 24 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal CDT NT CT SING N N 1 CDT NT HT1 SING N N 2 CDT NT HT2 SING N N 3 CDT CT OT DOUB N N 4 CDT CT N SING N N 5 CDT N CA SING N N 6 CDT N HN1 SING N N 7 CDT CA CB SING N N 8 CDT CA C SING N N 9 CDT CA HA SING N N 10 CDT CB CG SING N N 11 CDT CB HB1 SING N N 12 CDT CB HB2 SING N N 13 CDT CG SD SING N N 14 CDT CG HG1 SING N N 15 CDT CG HG2 SING N N 16 CDT SD CE SING N N 17 CDT CE HE1 SING N N 18 CDT CE HE2 SING N N 19 CDT CE HE3 SING N N 20 CDT C O DOUB N N 21 CDT C OXT SING N N 22 CDT OXT HXT SING N N 23 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor CDT SMILES ACDLabs 10.04 "O=C(NC(C(=O)O)CCSC)N" CDT SMILES_CANONICAL CACTVS 3.341 "CSCC[C@@H](NC(N)=O)C(O)=O" CDT SMILES CACTVS 3.341 "CSCC[CH](NC(N)=O)C(O)=O" CDT SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CSCC[C@H](C(=O)O)NC(=O)N" CDT SMILES "OpenEye OEToolkits" 1.5.0 "CSCCC(C(=O)O)NC(=O)N" CDT InChI InChI 1.03 "InChI=1S/C6H12N2O3S/c1-12-3-2-4(5(9)10)8-6(7)11/h4H,2-3H2,1H3,(H,9,10)(H3,7,8,11)/t4-/m1/s1" CDT InChIKey InChI 1.03 DEWDMTSMCKXBNP-SCSAIBSYSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier CDT "SYSTEMATIC NAME" ACDLabs 10.04 N-carbamoyl-D-methionine CDT "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2R)-2-(aminocarbonylamino)-4-methylsulfanyl-butanoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site CDT "Create component" 2003-05-28 RCSB CDT "Modify descriptor" 2011-06-04 RCSB CDT "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id CDT _pdbx_chem_comp_synonyms.name N-CARBAMYL-D-METHIONINE _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##