data_COF # _chem_comp.id COF _chem_comp.name "TRIFLUOROACETONYL COENZYME A" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H37 F3 N7 O17 P3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 877.569 _chem_comp.one_letter_code ? _chem_comp.three_letter_code COF _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6CSC _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal COF N1A AN1 N 0 1 Y N N 12.274 16.666 17.605 -7.247 -2.149 -7.212 N1A COF 1 COF C2A AC2 C 0 1 Y N N 11.432 17.681 17.893 -6.324 -2.002 -8.145 C2A COF 2 COF N3A AN3 N 0 1 Y N N 11.142 18.781 17.206 -5.101 -1.599 -7.871 N3A COF 3 COF C4A AC4 C 0 1 Y N N 11.822 18.780 16.062 -4.745 -1.316 -6.622 C4A COF 4 COF C5A AC5 C 0 1 Y N N 12.704 17.803 15.607 -5.689 -1.463 -5.593 C5A COF 5 COF C6A AC6 C 0 1 Y N N 12.953 16.696 16.461 -6.982 -1.895 -5.935 C6A COF 6 COF N6A AN6 N 0 1 N N N 13.762 15.657 16.168 -7.956 -2.052 -4.964 N6A COF 7 COF N7A AN7 N 0 1 Y N N 13.193 18.159 14.361 -5.075 -1.120 -4.435 N7A COF 8 COF C8A AC8 C 0 1 Y N N 12.625 19.319 14.115 -3.841 -0.786 -4.682 C8A COF 9 COF N9A AN9 N 0 1 Y N N 11.763 19.740 15.086 -3.588 -0.894 -6.017 N9A COF 10 COF C1B AC1* C 0 1 N N R 11.041 21.011 15.147 -2.316 -0.606 -6.684 C1B COF 11 COF C2B AC2* C 0 1 N N R 12.017 22.153 14.913 -2.204 0.902 -7.024 C2B COF 12 COF O2B AO2* O 0 1 N N N 12.673 22.477 16.104 -2.816 1.187 -8.283 O2B COF 13 COF C3B AC3* C 0 1 N N S 11.061 23.236 14.475 -0.667 1.104 -7.098 C3B COF 14 COF O3B AO3* O 0 1 N N N 10.263 23.685 15.575 -0.222 1.058 -8.456 O3B COF 15 COF P3B AP3* P 0 1 N N N 10.059 25.263 15.863 0.502 2.464 -8.755 P3B COF 16 COF O7A AO7 O 0 1 N N N 11.403 25.923 15.829 1.647 2.636 -7.832 O7A COF 17 COF O8A AO8 O 0 1 N N N 9.177 25.370 17.063 1.032 2.482 -10.275 O8A COF 18 COF O9A AO9 O 0 1 N N N 9.281 25.756 14.695 -0.546 3.666 -8.538 O9A COF 19 COF C4B AC4* C 0 1 N N R 10.183 22.469 13.516 -0.095 -0.078 -6.295 C4B COF 20 COF O4B AO4* O 0 1 N N N 10.157 21.118 14.058 -1.208 -0.832 -5.786 O4B COF 21 COF C5B AC5* C 0 1 N N N 10.629 22.490 12.045 0.754 0.442 -5.134 C5B COF 22 COF O5B AO5* O 0 1 N N N 12.062 22.397 11.931 1.274 -0.661 -4.391 O5B COF 23 COF P1A AP1 P 0 1 N N S 12.779 21.473 10.865 2.153 -0.042 -3.192 P1A COF 24 COF O1A AO1 O 0 1 N N N 13.049 22.249 9.635 1.293 0.806 -2.338 O1A COF 25 COF O2A AO2 O 0 1 N N N 12.115 20.131 10.779 3.346 0.846 -3.805 O2A COF 26 COF O3A AO3 O 0 1 N N N 14.181 21.164 11.588 2.773 -1.237 -2.309 O3A COF 27 COF P2A AP2 P 0 1 N N S 15.383 22.100 11.078 3.634 -0.550 -1.136 P2A COF 28 COF O4A AO4 O 0 1 N N N 15.694 21.857 9.649 4.709 0.275 -1.731 O4A COF 29 COF O5A AO5 O 0 1 N N N 15.137 23.493 11.524 2.674 0.382 -0.241 O5A COF 30 COF O6A AO6 O 0 1 N N N 16.576 21.531 11.966 4.287 -1.693 -0.209 O6A COF 31 COF CBP PC11 C 0 1 N N N 17.358 19.639 13.134 5.685 -2.059 1.727 CBP COF 32 COF CCP PC12 C 0 1 N N N 16.969 20.176 11.813 5.035 -1.024 0.807 CCP COF 33 COF CDP PC13 C 0 1 N N N 18.312 18.504 13.040 4.598 -2.919 2.376 CDP COF 34 COF CEP PC14 C 0 1 N N N 17.928 20.738 13.988 6.621 -2.951 0.910 CEP COF 35 COF CAP PC10 C 0 1 N N R 16.099 19.183 13.796 6.485 -1.342 2.817 CAP COF 36 COF OAP PO10 O 0 1 N N N 15.622 18.019 13.174 7.584 -0.649 2.222 OAP COF 37 COF C9P PC9 C 0 1 N N N 16.351 18.835 15.298 5.595 -0.356 3.528 C9P COF 38 COF O9P PO9 O 0 1 N N N 16.300 19.727 16.150 5.757 0.834 3.365 O9P COF 39 COF N8P PN8 N 0 1 N N N 16.730 17.647 15.507 4.618 -0.797 4.344 N8P COF 40 COF C7P PC7 C 0 1 N N N 16.952 17.095 16.770 3.805 0.159 5.098 C7P COF 41 COF C6P PC6 C 0 1 N N N 18.430 17.148 17.045 2.777 -0.596 5.942 C6P COF 42 COF C5P PC5 C 0 1 N N N 19.022 16.072 17.888 1.940 0.388 6.717 C5P COF 43 COF O5P PO5 O 0 1 N N N 19.032 16.194 19.108 2.146 1.578 6.606 O5P COF 44 COF N4P PN4 N 0 1 N N N 19.467 15.004 17.223 0.963 -0.052 7.534 N4P COF 45 COF C3P PC3 C 0 1 N N N 19.425 14.925 15.779 0.150 0.905 8.287 C3P COF 46 COF C2P PC2 C 0 1 N N N 20.753 15.425 15.165 -0.877 0.148 9.131 C2P COF 47 COF S1P PS1 S 0 1 N N N 20.698 17.153 14.608 -1.884 1.334 10.064 S1P COF 48 COF C1I IC1 C 0 1 N N N 21.393 16.866 12.919 -2.981 0.190 10.946 C1I COF 49 COF C2I IC2 C 0 1 N N N 21.666 18.097 11.994 -3.934 0.974 11.810 C2I COF 50 COF O1I IO1 O 0 1 N N N 22.722 18.763 12.146 -3.879 2.181 11.830 O1I COF 51 COF C3I IC3 C 0 1 N N N 20.574 18.430 10.922 -4.957 0.254 12.651 C3I COF 52 COF F1I IF1 F 0 1 N N N 20.980 18.561 9.592 -5.720 1.188 13.360 F1I COF 53 COF F2I IF2 F 0 1 N N N 19.660 17.401 10.916 -5.795 -0.499 11.821 F2I COF 54 COF F3I IF3 F 0 1 N N N 19.889 19.596 11.252 -4.305 -0.595 13.551 F3I COF 55 COF H2A AH2 H 0 1 N N N 10.890 17.597 18.850 -6.582 -2.220 -9.170 H2A COF 56 COF H61A AH61 H 0 0 N N N 14.282 15.680 15.291 -8.845 -2.351 -5.213 H61A COF 57 COF H62A AH62 H 0 0 N N N 13.221 14.793 16.210 -7.750 -1.863 -4.035 H62A COF 58 COF H8A AH8 H 0 1 N N N 12.848 19.879 13.191 -3.124 -0.471 -3.939 H8A COF 59 COF H1B AH1* H 0 1 N N N 10.524 21.053 16.134 -2.210 -1.211 -7.584 H1B COF 60 COF H2B AH2* H 0 1 N N N 12.836 21.951 14.184 -2.640 1.512 -6.234 H2B COF 61 COF HO2A AHO2 H 0 0 N N N 13.282 23.190 15.957 -3.751 0.954 -8.199 HO2A COF 62 COF H3B AH3* H 0 1 N N N 11.562 24.139 14.055 -0.385 2.050 -6.637 H3B COF 63 COF HOA8 8HOA H 0 0 N N N 9.057 26.297 17.232 1.459 3.339 -10.413 HOA8 COF 64 COF HOA9 9HOA H 0 0 N N N 9.161 26.683 14.864 -1.274 3.517 -9.157 HOA9 COF 65 COF H4B AH4* H 0 1 N N N 9.177 22.947 13.456 0.512 -0.708 -6.945 H4B COF 66 COF H51A AH51 H 0 0 N N N 10.118 21.695 11.451 0.137 1.061 -4.482 H51A COF 67 COF H52A AH52 H 0 0 N N N 10.233 23.384 11.510 1.578 1.037 -5.526 H52A COF 68 COF HOA2 2HOA H 0 0 N N N 12.545 19.576 10.139 3.881 0.256 -4.354 HOA2 COF 69 COF HOA5 5HOA H 0 0 N N N 15.847 24.046 11.222 1.990 -0.193 0.127 HOA5 COF 70 COF H121 1H12 H 0 0 N N N 16.183 19.558 11.317 4.368 -0.388 1.389 H121 COF 71 COF H122 2H12 H 0 0 N N N 17.771 20.049 11.049 5.809 -0.411 0.345 H122 COF 72 COF H131 1H13 H 0 0 N N N 18.605 18.098 14.036 3.861 -2.273 2.855 H131 COF 73 COF H132 2H13 H 0 0 N N N 17.907 17.697 12.385 4.109 -3.524 1.612 H132 COF 74 COF H133 3H13 H 0 0 N N N 19.211 18.787 12.444 5.049 -3.572 3.123 H133 COF 75 COF H141 1H14 H 0 0 N N N 18.221 20.332 14.984 7.434 -2.349 0.504 H141 COF 76 COF H142 2H14 H 0 0 N N N 18.773 21.262 13.484 7.032 -3.731 1.552 H142 COF 77 COF H143 3H14 H 0 0 N N N 17.229 21.602 14.077 6.064 -3.410 0.093 H143 COF 78 COF H10 H10 H 0 1 N N N 15.360 20.013 13.712 6.862 -2.073 3.532 H10 COF 79 COF HO1 HO1 H 0 1 N N N 14.821 17.729 13.595 7.209 -0.013 1.597 HO1 COF 80 COF HN8 HN8 H 0 1 N N N 16.859 17.124 14.640 4.453 -1.749 4.433 HN8 COF 81 COF H71 1H7 H 0 1 N N N 16.346 17.584 17.567 4.449 0.748 5.752 H71 COF 82 COF H72 2H7 H 0 1 N N N 16.530 16.068 16.872 3.288 0.823 4.404 H72 COF 83 COF H61 1H6 H 0 1 N N N 18.980 17.198 16.076 2.133 -1.184 5.288 H61 COF 84 COF H62 2H6 H 0 1 N N N 18.684 18.140 17.485 3.293 -1.259 6.635 H62 COF 85 COF HN4 HN4 H 0 1 N N N 19.835 14.256 17.811 0.799 -1.004 7.622 HN4 COF 86 COF H31 1H3 H 0 1 N N N 19.168 13.897 15.428 0.794 1.493 8.941 H31 COF 87 COF H32 2H3 H 0 1 N N N 18.546 15.468 15.360 -0.365 1.568 7.594 H32 COF 88 COF H21 1H2 H 0 1 N N N 21.597 15.268 15.875 -1.521 -0.439 8.477 H21 COF 89 COF H22 2H2 H 0 1 N N N 21.079 14.755 14.335 -0.361 -0.514 9.825 H22 COF 90 COF HI11 1HI1 H 0 0 N N N 22.331 16.271 13.012 -3.547 -0.399 10.224 HI11 COF 91 COF HI12 2HI1 H 0 0 N N N 20.734 16.147 12.376 -2.386 -0.474 11.571 HI12 COF 92 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal COF N1A C2A SING Y N 1 COF N1A C6A DOUB Y N 2 COF C2A N3A DOUB Y N 3 COF C2A H2A SING N N 4 COF N3A C4A SING Y N 5 COF C4A C5A DOUB Y N 6 COF C4A N9A SING Y N 7 COF C5A C6A SING Y N 8 COF C5A N7A SING Y N 9 COF C6A N6A SING N N 10 COF N6A H61A SING N N 11 COF N6A H62A SING N N 12 COF N7A C8A DOUB Y N 13 COF C8A N9A SING Y N 14 COF C8A H8A SING N N 15 COF N9A C1B SING N N 16 COF C1B C2B SING N N 17 COF C1B O4B SING N N 18 COF C1B H1B SING N N 19 COF C2B O2B SING N N 20 COF C2B C3B SING N N 21 COF C2B H2B SING N N 22 COF O2B HO2A SING N N 23 COF C3B O3B SING N N 24 COF C3B C4B SING N N 25 COF C3B H3B SING N N 26 COF O3B P3B SING N N 27 COF P3B O7A DOUB N N 28 COF P3B O8A SING N N 29 COF P3B O9A SING N N 30 COF O8A HOA8 SING N N 31 COF O9A HOA9 SING N N 32 COF C4B O4B SING N N 33 COF C4B C5B SING N N 34 COF C4B H4B SING N N 35 COF C5B O5B SING N N 36 COF C5B H51A SING N N 37 COF C5B H52A SING N N 38 COF O5B P1A SING N N 39 COF P1A O1A DOUB N N 40 COF P1A O2A SING N N 41 COF P1A O3A SING N N 42 COF O2A HOA2 SING N N 43 COF O3A P2A SING N N 44 COF P2A O4A DOUB N N 45 COF P2A O5A SING N N 46 COF P2A O6A SING N N 47 COF O5A HOA5 SING N N 48 COF O6A CCP SING N N 49 COF CBP CCP SING N N 50 COF CBP CDP SING N N 51 COF CBP CEP SING N N 52 COF CBP CAP SING N N 53 COF CCP H121 SING N N 54 COF CCP H122 SING N N 55 COF CDP H131 SING N N 56 COF CDP H132 SING N N 57 COF CDP H133 SING N N 58 COF CEP H141 SING N N 59 COF CEP H142 SING N N 60 COF CEP H143 SING N N 61 COF CAP OAP SING N N 62 COF CAP C9P SING N N 63 COF CAP H10 SING N N 64 COF OAP HO1 SING N N 65 COF C9P O9P DOUB N N 66 COF C9P N8P SING N N 67 COF N8P C7P SING N N 68 COF N8P HN8 SING N N 69 COF C7P C6P SING N N 70 COF C7P H71 SING N N 71 COF C7P H72 SING N N 72 COF C6P C5P SING N N 73 COF C6P H61 SING N N 74 COF C6P H62 SING N N 75 COF C5P O5P DOUB N N 76 COF C5P N4P SING N N 77 COF N4P C3P SING N N 78 COF N4P HN4 SING N N 79 COF C3P C2P SING N N 80 COF C3P H31 SING N N 81 COF C3P H32 SING N N 82 COF C2P S1P SING N N 83 COF C2P H21 SING N N 84 COF C2P H22 SING N N 85 COF S1P C1I SING N N 86 COF C1I C2I SING N N 87 COF C1I HI11 SING N N 88 COF C1I HI12 SING N N 89 COF C2I O1I DOUB N N 90 COF C2I C3I SING N N 91 COF C3I F1I SING N N 92 COF C3I F2I SING N N 93 COF C3I F3I SING N N 94 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor COF SMILES ACDLabs 10.04 "FC(F)(F)C(=O)CSCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3OP(=O)(O)O" COF SMILES_CANONICAL CACTVS 3.341 "CC(C)(CO[P@@](O)(=O)O[P@](O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O[P](O)(O)=O)n2cnc3c(N)ncnc23)[C@@H](O)C(=O)NCCC(=O)NCCSCC(=O)C(F)(F)F" COF SMILES CACTVS 3.341 "CC(C)(CO[P](O)(=O)O[P](O)(=O)OC[CH]1O[CH]([CH](O)[CH]1O[P](O)(O)=O)n2cnc3c(N)ncnc23)[CH](O)C(=O)NCCC(=O)NCCSCC(=O)C(F)(F)F" COF SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC(C)(CO[P@](=O)(O)O[P@@](=O)(O)OC[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)OP(=O)(O)O)[C@H](C(=O)NCCC(=O)NCCSCC(=O)C(F)(F)F)O" COF SMILES "OpenEye OEToolkits" 1.5.0 "CC(C)(COP(=O)(O)OP(=O)(O)OCC1C(C(C(O1)n2cnc3c2ncnc3N)O)OP(=O)(O)O)C(C(=O)NCCC(=O)NCCSCC(=O)C(F)(F)F)O" COF InChI InChI 1.03 ;InChI=1S/C24H37F3N7O17P3S/c1-23(2,18(38)21(39)30-4-3-14(36)29-5-6-55-8-13(35)24(25,26)27)9-48-54(45,46)51-53(43,44)47-7-12-17(50-52(40,41)42)16(37)22(49-12)34-11-33-15-19(28)31-10-32-20(15)34/h10-12,16-18,22,37-38H,3-9H2,1-2H3,(H,29,36)(H,30,39)(H,43,44)(H,45,46)(H2,28,31,32)(H2,40,41,42)/t12-,16-,17-,18+,22-/m1/s1 ; COF InChIKey InChI 1.03 XDIQTPZOIIYCTR-GRFIIANRSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier COF "SYSTEMATIC NAME" ACDLabs 10.04 ;[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]methyl (3R)-3-hydroxy-2,2-dimethyl-4-oxo-4-{[3-oxo-3-({2-[(3,3,3-trifluoro-2-oxopropyl)sulfanyl]ethyl}amino)propyl]amino}butyl dihydrogen diphosphate (non-preferred name) ; COF "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-hydroxy-3-phosphonooxy-oxolan-2-yl]methyl [hydroxy-[(3R)-3-hydroxy-2,2-dimethyl-4-oxo-4-[[3-oxo-3-[2-(3,3,3-trifluoro-2-oxo-propyl)sulfanylethylamino]propyl]amino]butoxy]phosphoryl] hydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site COF "Create component" 1999-07-08 EBI COF "Modify descriptor" 2011-06-04 RCSB #