data_D11 # _chem_comp.id D11 _chem_comp.name D-PHOSPHOTHREONINE _chem_comp.type "D-PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C4 H10 N O6 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms O-PHOSPHONO-D-THREONINE _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2006-11-15 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 199.099 _chem_comp.one_letter_code T _chem_comp.three_letter_code D11 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal D11 N N N 0 1 N N N Y Y N 33.670 29.294 24.115 2.329 1.063 1.189 N D11 1 D11 CA CA C 0 1 N N R Y N N 33.344 27.922 24.577 1.956 0.549 -0.135 CA D11 2 D11 CB CB C 0 1 N N S N N N 32.010 27.579 25.132 0.599 1.128 -0.543 CB D11 3 D11 CG2 CG2 C 0 1 N N N N N N 31.705 26.108 25.417 0.691 2.654 -0.597 CG2 D11 4 D11 OG1 OG1 O 0 1 N N N N N N 31.026 27.922 24.205 -0.390 0.744 0.414 OG1 D11 5 D11 P P P 0 1 N N N N N N 30.065 29.195 24.240 -1.692 -0.122 0.030 P D11 6 D11 O1P O1P O 0 1 N N N N N N 30.947 30.557 24.017 -2.429 0.553 -1.061 O1P D11 7 D11 O2P O2P O 0 1 N N N N N N 29.357 29.303 25.696 -1.237 -1.588 -0.456 O2P D11 8 D11 O3P O3P O 0 1 N N N N N N 29.156 28.835 22.945 -2.647 -0.256 1.319 O3P D11 9 D11 C C C 0 1 N N N Y N Y 34.451 27.459 25.528 1.865 -0.954 -0.083 C D11 10 D11 O O O 0 1 N N N Y N Y 34.461 28.313 26.605 1.727 -1.515 0.979 O D11 11 D11 OXT OXT O 0 1 N Y N Y N Y 35.312 26.491 25.398 1.937 -1.671 -1.216 OXT D11 12 D11 H HN1 H 0 1 N N N Y Y N 33.743 29.903 24.904 2.460 2.064 1.164 H D11 13 D11 H2 HN2 H 0 1 N Y N Y Y N 34.540 29.282 23.622 1.645 0.805 1.883 H2 D11 14 D11 HA HA H 0 1 N N N Y N N 33.282 27.376 23.624 2.710 0.842 -0.866 HA D11 15 D11 HB HB H 0 1 N N N N N N 32.017 28.123 26.088 0.322 0.746 -1.526 HB D11 16 D11 HG21 HG21 H 0 0 N N N N N N 31.632 25.558 24.467 1.446 2.947 -1.327 HG21 D11 17 D11 HG22 HG22 H 0 0 N N N N N N 32.512 25.678 26.028 -0.275 3.067 -0.887 HG22 D11 18 D11 HG23 HG23 H 0 0 N N N N N N 30.752 26.030 25.960 0.969 3.036 0.386 HG23 D11 19 D11 HO2P HO2P H 0 0 N N N N N N 30.024 29.324 26.372 -0.748 -2.089 0.211 HO2P D11 20 D11 HO3P HO3P H 0 0 N N N N N N 28.245 28.765 23.206 -3.452 -0.767 1.161 HO3P D11 21 D11 HXT HOXT H 0 1 N Y N Y N Y 35.905 26.492 26.140 1.874 -2.632 -1.132 HXT D11 22 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal D11 N CA SING N N 1 D11 N H SING N N 2 D11 N H2 SING N N 3 D11 CA CB SING N N 4 D11 CA C SING N N 5 D11 CA HA SING N N 6 D11 CB CG2 SING N N 7 D11 CB OG1 SING N N 8 D11 CB HB SING N N 9 D11 CG2 HG21 SING N N 10 D11 CG2 HG22 SING N N 11 D11 CG2 HG23 SING N N 12 D11 OG1 P SING N N 13 D11 P O1P DOUB N N 14 D11 P O2P SING N N 15 D11 P O3P SING N N 16 D11 O2P HO2P SING N N 17 D11 O3P HO3P SING N N 18 D11 C O DOUB N N 19 D11 C OXT SING N N 20 D11 OXT HXT SING N N 21 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor D11 SMILES ACDLabs 10.04 "O=P(O)(O)OC(C(N)C(=O)O)C" D11 SMILES_CANONICAL CACTVS 3.341 "C[C@H](O[P](O)(O)=O)[C@@H](N)C(O)=O" D11 SMILES CACTVS 3.341 "C[CH](O[P](O)(O)=O)[CH](N)C(O)=O" D11 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C[C@@H]([C@H](C(=O)O)N)OP(=O)(O)O" D11 SMILES "OpenEye OEToolkits" 1.5.0 "CC(C(C(=O)O)N)OP(=O)(O)O" D11 InChI InChI 1.03 "InChI=1S/C4H10NO6P/c1-2(3(5)4(6)7)11-12(8,9)10/h2-3H,5H2,1H3,(H,6,7)(H2,8,9,10)/t2-,3+/m0/s1" D11 InChIKey InChI 1.03 USRGIUJOYOXOQJ-STHAYSLISA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier D11 "SYSTEMATIC NAME" ACDLabs 10.04 O-phosphono-D-threonine D11 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2R,3S)-2-amino-3-phosphonooxy-butanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site D11 "Create component" 2006-11-15 RCSB D11 "Modify descriptor" 2011-06-04 RCSB D11 "Modify synonyms" 2021-03-01 PDBE D11 "Modify backbone" 2023-11-03 PDBE D11 "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id D11 _pdbx_chem_comp_synonyms.name O-PHOSPHONO-D-THREONINE _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id D11 _pdbx_chem_comp_pcm.modified_residue_id DTH _pdbx_chem_comp_pcm.type Phosphorylation _pdbx_chem_comp_pcm.category "Named protein modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom ? _pdbx_chem_comp_pcm.modified_residue_id_linking_atom ? _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #