data_DMQ # _chem_comp.id DMQ _chem_comp.name "[4-R-(-4-ALPHA,5-ALPHA,6-BETA,7-BETA)]-HEXAHYDRO-5,6-BIS(HYDROXY)-1,3-BIS([(3-AMINO)PHENYL]METHYL)-4,7-BIS(PHENYLMETHYL)-2H-1,3-DIAZEPINONE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C33 H36 N4 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "DMP450(INHIBITOR OF DUPONT MERCK)" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces 450 _chem_comp.formula_weight 536.664 _chem_comp.one_letter_code ? _chem_comp.three_letter_code DMQ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details "OpenEye/OEToolkits V1.4.2" _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1MER _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal DMQ C1 C1 C 0 1 N N N -8.871 15.514 27.906 2.544 -2.502 0.504 C1 DMQ 1 DMQ O1 O1 O 0 1 N N N -8.183 14.504 27.937 3.078 -3.607 0.334 O1 DMQ 2 DMQ N2 N2 N 0 1 N N N -8.707 16.340 26.843 2.481 -1.910 1.773 N2 DMQ 3 DMQ C2 C2 C 0 1 N N N -8.054 15.792 25.645 3.378 -2.410 2.809 C2 DMQ 4 DMQ C3 C3 C 0 1 N N R -8.897 17.811 26.885 1.336 -1.112 2.250 C3 DMQ 5 DMQ C4 C4 C 0 1 N N S -10.289 18.339 27.132 1.301 0.313 1.694 C4 DMQ 6 DMQ O4 O4 O 0 1 N N N -10.202 19.708 26.819 0.283 1.033 2.401 O4 DMQ 7 DMQ C5 C5 C 0 1 N N S -10.714 18.104 28.571 1.003 0.394 0.201 C5 DMQ 8 DMQ O5 O5 O 0 1 N N N -11.943 18.729 28.856 0.944 1.773 -0.186 O5 DMQ 9 DMQ C6 C6 C 0 1 N N R -10.940 16.633 28.847 2.022 -0.322 -0.689 C6 DMQ 10 DMQ C7 C7 C 0 1 N N N -9.615 14.945 30.156 1.683 -2.522 -1.794 C7 DMQ 11 DMQ N7 N7 N 0 1 N N N -9.746 15.750 28.932 1.980 -1.792 -0.566 N7 DMQ 12 DMQ C20 C20 C 0 1 Y N N -8.677 16.113 24.313 4.687 -1.674 2.822 C20 DMQ 13 DMQ C21 C21 C 0 1 Y N N -10.074 15.993 24.106 4.827 -0.538 3.611 C21 DMQ 14 DMQ C22 C22 C 0 1 Y N N -10.639 16.317 22.860 6.042 0.147 3.623 C22 DMQ 15 DMQ C23 C23 C 0 1 Y N N -9.797 16.756 21.822 7.108 -0.308 2.846 C23 DMQ 16 DMQ C28 C28 C 0 1 Y N N -8.409 16.869 22.033 6.958 -1.449 2.058 C28 DMQ 17 DMQ N29 N29 N 0 1 N N N -7.580 17.364 20.991 8.035 -1.909 1.272 N29 DMQ 18 DMQ C29 C29 C 0 1 Y N N -7.839 16.548 23.275 5.743 -2.134 2.046 C29 DMQ 19 DMQ C31 C31 C 0 1 N N N -7.790 18.443 27.746 0.015 -1.882 2.102 C31 DMQ 20 DMQ C32 C32 C 0 1 Y N N -6.429 18.274 27.118 -0.103 -2.965 3.135 C32 DMQ 21 DMQ C33 C33 C 0 1 Y N N -5.509 17.356 27.673 0.380 -4.238 2.855 C33 DMQ 22 DMQ C34 C34 C 0 1 Y N N -4.254 17.165 27.057 0.270 -5.244 3.815 C34 DMQ 23 DMQ C35 C35 C 0 1 Y N N -3.924 17.894 25.891 -0.323 -4.970 5.048 C35 DMQ 24 DMQ C36 C36 C 0 1 Y N N -4.848 18.818 25.333 -0.805 -3.690 5.321 C36 DMQ 25 DMQ C37 C37 C 0 1 Y N N -6.104 19.013 25.948 -0.695 -2.684 4.361 C37 DMQ 26 DMQ C61 C61 C 0 1 N N N -12.035 15.950 27.990 3.461 0.204 -0.574 C61 DMQ 27 DMQ C62 C62 C 0 1 Y N N -12.630 14.749 28.693 4.249 -0.086 -1.818 C62 DMQ 28 DMQ C63 C63 C 0 1 Y N N -13.571 14.957 29.728 4.959 -1.276 -1.920 C63 DMQ 29 DMQ C64 C64 C 0 1 Y N N -14.068 13.860 30.463 5.692 -1.545 -3.076 C64 DMQ 30 DMQ C65 C65 C 0 1 Y N N -13.619 12.551 30.156 5.709 -0.623 -4.122 C65 DMQ 31 DMQ C66 C66 C 0 1 Y N N -12.688 12.341 29.115 4.993 0.570 -4.012 C66 DMQ 32 DMQ C67 C67 C 0 1 Y N N -12.196 13.442 28.379 4.261 0.839 -2.855 C67 DMQ 33 DMQ C70 C70 C 0 1 Y N N -9.615 15.656 31.486 0.294 -3.092 -1.787 C70 DMQ 34 DMQ C71 C71 C 0 1 Y N N -10.438 15.153 32.513 0.077 -4.367 -1.280 C71 DMQ 35 DMQ C72 C72 C 0 1 Y N N -10.450 15.815 33.756 -1.214 -4.896 -1.273 C72 DMQ 36 DMQ N79 N79 N 0 1 N N N -11.313 15.356 34.793 -1.444 -6.190 -0.760 N79 DMQ 37 DMQ C77 C77 C 0 1 Y N N -9.638 16.948 33.986 -2.279 -4.145 -1.771 C77 DMQ 38 DMQ C78 C78 C 0 1 Y N N -8.801 17.448 32.968 -2.052 -2.865 -2.277 C78 DMQ 39 DMQ C79 C79 C 0 1 Y N N -8.800 16.801 31.716 -0.761 -2.336 -2.285 C79 DMQ 40 DMQ H21A 1H2 H 0 0 N N N -6.981 16.097 25.635 3.539 -3.479 2.629 H21A DMQ 41 DMQ H22A 2H2 H 0 0 N N N -7.954 14.686 25.750 2.864 -2.316 3.771 H22A DMQ 42 DMQ H3 H3 H 0 1 N N N -8.783 18.160 25.832 1.471 -1.007 3.336 H3 DMQ 43 DMQ H4 H4 H 0 1 N N N -11.062 17.824 26.515 2.243 0.828 1.915 H4 DMQ 44 DMQ HO4 HO4 H 0 1 N N N -11.078 20.040 26.974 0.029 1.770 1.829 HO4 DMQ 45 DMQ H5 H5 H 0 1 N N N -9.889 18.518 29.196 0.000 -0.005 0.005 H5 DMQ 46 DMQ HO5 HO5 H 0 1 N N N -12.208 18.582 29.756 1.430 1.838 -1.020 HO5 DMQ 47 DMQ H6 H6 H 0 1 N N N -11.317 16.729 29.891 1.730 -0.095 -1.724 H6 DMQ 48 DMQ H71A 1H7 H 0 0 N N N -10.409 14.163 30.162 2.426 -3.319 -1.901 H71A DMQ 49 DMQ H72 2H7 H 0 1 N N N -8.696 14.316 30.080 1.820 -1.833 -2.634 H72 DMQ 50 DMQ H21 H21 H 0 1 N N N -10.728 15.644 24.922 4.002 -0.176 4.219 H21 DMQ 51 DMQ H22 H22 H 0 1 N N N -11.726 16.228 22.699 6.159 1.035 4.238 H22 DMQ 52 DMQ H23 H23 H 0 1 N N N -10.226 17.012 20.839 8.050 0.233 2.863 H23 DMQ 53 DMQ HN21 1HN2 H 0 0 N N N -6.574 17.445 21.143 8.354 -2.850 1.384 HN21 DMQ 54 DMQ HN22 2HN2 H 0 0 N N N -7.938 18.271 20.693 8.521 -1.262 0.685 HN22 DMQ 55 DMQ H29 H29 H 0 1 N N N -6.750 16.636 23.432 5.624 -3.024 1.431 H29 DMQ 56 DMQ H311 1H31 H 0 0 N N N -8.006 19.514 27.964 -0.038 -2.308 1.098 H311 DMQ 57 DMQ H312 2H31 H 0 0 N N N -7.809 18.046 28.787 -0.817 -1.181 2.190 H312 DMQ 58 DMQ H33 H33 H 0 1 N N N -5.769 16.790 28.583 0.843 -4.461 1.898 H33 DMQ 59 DMQ H34 H34 H 0 1 N N N -3.533 16.448 27.485 0.645 -6.241 3.603 H34 DMQ 60 DMQ H35 H35 H 0 1 N N N -2.941 17.741 25.414 -0.408 -5.754 5.795 H35 DMQ 61 DMQ H36 H36 H 0 1 N N N -4.590 19.384 24.422 -1.266 -3.477 6.281 H36 DMQ 62 DMQ H37 H37 H 0 1 N N N -6.821 19.733 25.520 -1.074 -1.690 4.582 H37 DMQ 63 DMQ H611 1H61 H 0 0 N N N -12.825 16.675 27.686 3.939 -0.255 0.294 H611 DMQ 64 DMQ H612 2H61 H 0 0 N N N -11.649 15.679 26.979 3.432 1.279 -0.384 H612 DMQ 65 DMQ H63 H63 H 0 1 N N N -13.918 15.977 29.962 4.952 -2.001 -1.111 H63 DMQ 66 DMQ H64 H64 H 0 1 N N N -14.801 14.024 31.270 6.249 -2.474 -3.162 H64 DMQ 67 DMQ H65 H65 H 0 1 N N N -13.996 11.689 30.731 6.279 -0.832 -5.022 H65 DMQ 68 DMQ H66 H66 H 0 1 N N N -12.346 11.319 28.877 5.006 1.288 -4.826 H66 DMQ 69 DMQ H67 H67 H 0 1 N N N -11.474 13.281 27.560 3.706 1.770 -2.778 H67 DMQ 70 DMQ H71 H71 H 0 1 N N N -11.061 14.258 32.347 0.908 -4.951 -0.891 H71 DMQ 71 DMQ HN71 1HN7 H 0 0 N N N -11.321 15.835 35.693 -2.089 -6.308 -0.005 HN71 DMQ 72 DMQ HN72 2HN7 H 0 0 N N N -11.127 14.366 34.954 -0.890 -6.952 -1.094 HN72 DMQ 73 DMQ H77 H77 H 0 1 N N N -9.657 17.446 34.969 -3.288 -4.547 -1.770 H77 DMQ 74 DMQ H78 H78 H 0 1 N N N -8.160 18.327 33.147 -2.881 -2.280 -2.666 H78 DMQ 75 DMQ H79 H79 H 0 1 N N N -8.156 17.193 30.910 -0.594 -1.338 -2.681 H79 DMQ 76 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DMQ C1 O1 DOUB N N 1 DMQ C1 N2 SING N N 2 DMQ C1 N7 SING N N 3 DMQ N2 C2 SING N N 4 DMQ N2 C3 SING N N 5 DMQ C2 C20 SING N N 6 DMQ C2 H21A SING N N 7 DMQ C2 H22A SING N N 8 DMQ C3 C4 SING N N 9 DMQ C3 C31 SING N N 10 DMQ C3 H3 SING N N 11 DMQ C4 O4 SING N N 12 DMQ C4 C5 SING N N 13 DMQ C4 H4 SING N N 14 DMQ O4 HO4 SING N N 15 DMQ C5 O5 SING N N 16 DMQ C5 C6 SING N N 17 DMQ C5 H5 SING N N 18 DMQ O5 HO5 SING N N 19 DMQ C6 N7 SING N N 20 DMQ C6 C61 SING N N 21 DMQ C6 H6 SING N N 22 DMQ C7 N7 SING N N 23 DMQ C7 C70 SING N N 24 DMQ C7 H71A SING N N 25 DMQ C7 H72 SING N N 26 DMQ C20 C21 DOUB Y N 27 DMQ C20 C29 SING Y N 28 DMQ C21 C22 SING Y N 29 DMQ C21 H21 SING N N 30 DMQ C22 C23 DOUB Y N 31 DMQ C22 H22 SING N N 32 DMQ C23 C28 SING Y N 33 DMQ C23 H23 SING N N 34 DMQ C28 N29 SING N N 35 DMQ C28 C29 DOUB Y N 36 DMQ N29 HN21 SING N N 37 DMQ N29 HN22 SING N N 38 DMQ C29 H29 SING N N 39 DMQ C31 C32 SING N N 40 DMQ C31 H311 SING N N 41 DMQ C31 H312 SING N N 42 DMQ C32 C33 DOUB Y N 43 DMQ C32 C37 SING Y N 44 DMQ C33 C34 SING Y N 45 DMQ C33 H33 SING N N 46 DMQ C34 C35 DOUB Y N 47 DMQ C34 H34 SING N N 48 DMQ C35 C36 SING Y N 49 DMQ C35 H35 SING N N 50 DMQ C36 C37 DOUB Y N 51 DMQ C36 H36 SING N N 52 DMQ C37 H37 SING N N 53 DMQ C61 C62 SING N N 54 DMQ C61 H611 SING N N 55 DMQ C61 H612 SING N N 56 DMQ C62 C63 DOUB Y N 57 DMQ C62 C67 SING Y N 58 DMQ C63 C64 SING Y N 59 DMQ C63 H63 SING N N 60 DMQ C64 C65 DOUB Y N 61 DMQ C64 H64 SING N N 62 DMQ C65 C66 SING Y N 63 DMQ C65 H65 SING N N 64 DMQ C66 C67 DOUB Y N 65 DMQ C66 H66 SING N N 66 DMQ C67 H67 SING N N 67 DMQ C70 C71 DOUB Y N 68 DMQ C70 C79 SING Y N 69 DMQ C71 C72 SING Y N 70 DMQ C71 H71 SING N N 71 DMQ C72 N79 SING N N 72 DMQ C72 C77 DOUB Y N 73 DMQ N79 HN71 SING N N 74 DMQ N79 HN72 SING N N 75 DMQ C77 C78 SING Y N 76 DMQ C77 H77 SING N N 77 DMQ C78 C79 DOUB Y N 78 DMQ C78 H78 SING N N 79 DMQ C79 H79 SING N N 80 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor DMQ SMILES ACDLabs 10.04 "O=C1N(C(C(O)C(O)C(N1Cc2cccc(N)c2)Cc3ccccc3)Cc4ccccc4)Cc5cccc(N)c5" DMQ SMILES_CANONICAL CACTVS 3.341 "Nc1cccc(CN2[C@H](Cc3ccccc3)[C@H](O)[C@@H](O)[C@@H](Cc4ccccc4)N(Cc5cccc(N)c5)C2=O)c1" DMQ SMILES CACTVS 3.341 "Nc1cccc(CN2[CH](Cc3ccccc3)[CH](O)[CH](O)[CH](Cc4ccccc4)N(Cc5cccc(N)c5)C2=O)c1" DMQ SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1ccc(cc1)C[C@@H]2[C@@H]([C@H]([C@H](N(C(=O)N2Cc3cccc(c3)N)Cc4cccc(c4)N)Cc5ccccc5)O)O" DMQ SMILES "OpenEye OEToolkits" 1.5.0 "c1ccc(cc1)CC2C(C(C(N(C(=O)N2Cc3cccc(c3)N)Cc4cccc(c4)N)Cc5ccccc5)O)O" DMQ InChI InChI 1.03 "InChI=1S/C33H36N4O3/c34-27-15-7-13-25(17-27)21-36-29(19-23-9-3-1-4-10-23)31(38)32(39)30(20-24-11-5-2-6-12-24)37(33(36)40)22-26-14-8-16-28(35)18-26/h1-18,29-32,38-39H,19-22,34-35H2/t29-,30-,31+,32+/m1/s1" DMQ InChIKey InChI 1.03 KYRSNWPSSXSNEP-ZRTHHSRSSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier DMQ "SYSTEMATIC NAME" ACDLabs 10.04 "(4R,5S,6S,7R)-1,3-bis(3-aminobenzyl)-4,7-dibenzyl-5,6-dihydroxy-1,3-diazepan-2-one" DMQ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(4R,5S,6S,7R)-1,3-bis[(3-aminophenyl)methyl]-5,6-dihydroxy-4,7-bis(phenylmethyl)-1,3-diazepan-2-one" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site DMQ "Create component" 1999-07-08 RCSB DMQ "Modify descriptor" 2011-06-04 RCSB DMQ "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id DMQ _pdbx_chem_comp_synonyms.name "DMP450(INHIBITOR OF DUPONT MERCK)" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##