data_E05 # _chem_comp.id E05 _chem_comp.name "(1~{R},3~{S},5~{Z})-4-methylidene-5-[(~{E})-3-[3-(6-methyl-6-oxidanyl-heptyl)phenyl]pent-2-enylidene]cyclohexane-1,3-diol" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H38 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-02-07 _chem_comp.pdbx_modified_date 2018-05-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 398.578 _chem_comp.one_letter_code ? _chem_comp.three_letter_code E05 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6FOD _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal E05 C6 C1 C 0 1 N N N -1.782 34.115 37.175 4.052 3.770 -0.056 C6 E05 1 E05 C7 C2 C 0 1 N N N -1.319 33.950 38.641 3.207 3.127 1.046 C7 E05 2 E05 C8 C3 C 0 1 N N N 0.075 34.457 38.926 2.186 2.209 0.426 C8 E05 3 E05 O9 O1 O 0 1 N N N 5.163 27.664 34.148 -6.160 -3.216 0.208 O9 E05 4 E05 C10 C4 C 0 1 N N N 5.012 28.808 33.290 -7.057 -2.120 0.012 C10 E05 5 E05 C11 C5 C 0 1 N N N 6.402 29.234 32.837 -7.200 -1.840 -1.485 C11 E05 6 E05 C12 C6 C 0 1 N N N 4.166 28.390 32.095 -8.426 -2.471 0.599 C12 E05 7 E05 C13 C7 C 0 1 N N N 4.342 29.907 34.116 -6.504 -0.878 0.713 C13 E05 8 E05 C14 C8 C 0 1 N N N 2.852 29.784 34.436 -5.196 -0.454 0.043 C14 E05 9 E05 C15 C9 C 0 1 N N N 2.466 30.418 35.757 -4.643 0.789 0.744 C15 E05 10 E05 C16 C10 C 0 1 N N N 2.680 29.502 36.949 -3.334 1.212 0.075 C16 E05 11 E05 C17 C11 C 0 1 N N N 1.772 29.785 38.157 -2.782 2.455 0.776 C17 E05 12 E05 C18 C12 C 0 1 Y N N 1.939 31.153 38.774 -1.493 2.873 0.116 C18 E05 13 E05 C19 C13 C 0 1 Y N N 0.918 32.101 38.686 -0.294 2.362 0.566 C19 E05 14 E05 C20 C14 C 0 1 Y N N 3.139 31.508 39.373 -1.516 3.763 -0.943 C20 E05 15 E05 C21 C15 C 0 1 Y N N 3.323 32.781 39.882 -0.338 4.153 -1.556 C21 E05 16 E05 C22 C16 C 0 1 Y N N 2.317 33.725 39.774 0.870 3.655 -1.114 C22 E05 17 E05 C23 C17 C 0 1 Y N N 1.107 33.402 39.156 0.902 2.750 -0.048 C23 E05 18 E05 C24 C18 C 0 1 N N N 0.517 35.754 38.971 2.449 0.890 0.304 C24 E05 19 E05 C25 C19 C 0 1 N N N -0.118 37.004 38.736 3.683 0.370 0.759 C25 E05 20 E05 C26 C20 C 0 1 N N N 0.494 38.200 38.451 3.947 -0.951 0.637 C26 E05 21 E05 C27 C21 C 0 1 N N N 1.949 38.382 38.248 2.972 -1.883 0.035 C27 E05 22 E05 C28 C22 C 0 1 N N N 2.686 37.498 37.589 1.672 -1.821 0.330 C28 E05 23 E05 C29 C23 C 0 1 N N S 2.503 39.672 38.811 3.519 -2.912 -0.933 C29 E05 24 E05 O30 O2 O 0 1 N N N 3.847 39.815 38.379 3.871 -2.276 -2.164 O30 E05 25 E05 C31 C24 C 0 1 N N N 1.674 40.846 38.307 4.763 -3.550 -0.308 C31 E05 26 E05 C32 C25 C 0 1 N N R 0.238 40.706 38.774 5.795 -2.468 0.013 C32 E05 27 E05 O33 O3 O 0 1 N N N 0.174 40.700 40.201 7.005 -3.083 0.459 O33 E05 28 E05 C34 C26 C 0 1 N N N -0.362 39.428 38.212 5.259 -1.546 1.107 C34 E05 29 E05 H1 H1 H 0 1 N N N -2.803 33.720 37.066 4.790 4.434 0.393 H1 E05 30 E05 H2 H2 H 0 1 N N N -1.771 35.181 36.905 4.561 2.991 -0.624 H2 E05 31 E05 H3 H3 H 0 1 N N N -1.101 33.562 36.511 3.405 4.342 -0.722 H3 E05 32 E05 H4 H4 H 0 1 N N N -2.021 34.499 39.285 3.853 2.555 1.712 H4 E05 33 E05 H5 H5 H 0 1 N N N -1.352 32.879 38.892 2.698 3.906 1.614 H5 E05 34 E05 H6 H6 H 0 1 N N N 5.689 27.901 34.903 -6.448 -4.039 -0.210 H6 E05 35 E05 H7 H7 H 0 1 N N N 6.998 29.532 33.712 -6.225 -1.591 -1.903 H7 E05 36 E05 H8 H8 H 0 1 N N N 6.895 28.393 32.327 -7.594 -2.726 -1.984 H8 E05 37 E05 H9 H9 H 0 1 N N N 6.317 30.084 32.144 -7.884 -1.005 -1.635 H9 E05 38 E05 H10 H10 H 0 1 N N N 3.167 28.086 32.441 -9.110 -1.635 0.449 H10 E05 39 E05 H11 H11 H 0 1 N N N 4.071 29.237 31.399 -8.819 -3.356 0.100 H11 E05 40 E05 H12 H12 H 0 1 N N N 4.649 27.545 31.582 -8.324 -2.670 1.666 H12 E05 41 E05 H13 H13 H 0 1 N N N 4.876 29.960 35.076 -7.229 -0.067 0.639 H13 E05 42 E05 H14 H14 H 0 1 N N N 4.478 30.851 33.568 -6.319 -1.105 1.763 H14 E05 43 E05 H15 H15 H 0 1 N N N 2.281 30.275 33.634 -4.471 -1.265 0.117 H15 E05 44 E05 H16 H16 H 0 1 N N N 2.590 28.716 34.472 -5.381 -0.227 -1.006 H16 E05 45 E05 H17 H17 H 0 1 N N N 3.073 31.324 35.900 -5.368 1.600 0.671 H17 E05 46 E05 H18 H18 H 0 1 N N N 1.402 30.693 35.715 -4.457 0.562 1.794 H18 E05 47 E05 H19 H19 H 0 1 N N N 2.499 28.468 36.621 -2.610 0.402 0.148 H19 E05 48 E05 H20 H20 H 0 1 N N N 3.725 29.606 37.276 -3.520 1.440 -0.975 H20 E05 49 E05 H21 H21 H 0 1 N N N 0.727 29.684 37.829 -3.507 3.266 0.702 H21 E05 50 E05 H22 H22 H 0 1 N N N 1.988 29.033 38.930 -2.596 2.228 1.825 H22 E05 51 E05 H23 H23 H 0 1 N N N -0.030 31.825 38.249 -0.278 1.664 1.390 H23 E05 52 E05 H24 H24 H 0 1 N N N 3.937 30.784 39.443 -2.459 4.157 -1.293 H24 E05 53 E05 H25 H25 H 0 1 N N N 4.254 33.039 40.365 -0.364 4.848 -2.381 H25 E05 54 E05 H26 H26 H 0 1 N N N 2.469 34.718 40.170 1.789 3.959 -1.593 H26 E05 55 E05 H27 H27 H 0 1 N N N 1.559 35.844 39.239 1.717 0.232 -0.141 H27 E05 56 E05 H28 H28 H 0 1 N N N -1.197 37.014 38.787 4.415 1.028 1.204 H28 E05 57 E05 H29 H29 H 0 1 N N N 3.738 37.683 37.432 1.310 -1.076 1.023 H29 E05 58 E05 H30 H30 H 0 1 N N N 2.234 36.593 37.210 0.982 -2.515 -0.126 H30 E05 59 E05 H31 H31 H 0 1 N N N 2.451 39.640 39.909 2.767 -3.678 -1.118 H31 E05 60 E05 H32 H32 H 0 1 N N N 4.207 40.622 38.726 3.131 -1.836 -2.605 H32 E05 61 E05 H33 H33 H 0 1 N N N 1.699 40.864 37.207 4.481 -4.065 0.611 H33 E05 62 E05 H34 H34 H 0 1 N N N 2.095 41.784 38.699 5.195 -4.267 -1.006 H34 E05 63 E05 H35 H35 H 0 1 N N N -0.337 41.558 38.384 5.996 -1.882 -0.884 H35 E05 64 E05 H36 H36 H 0 1 N N N 0.552 41.503 40.539 7.707 -2.456 0.681 H36 E05 65 E05 H37 H37 H 0 1 N N N -0.495 39.554 37.127 5.977 -0.748 1.297 H37 E05 66 E05 H38 H38 H 0 1 N N N -1.342 39.266 38.685 5.097 -2.120 2.019 H38 E05 67 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal E05 C12 C10 SING N N 1 E05 C11 C10 SING N N 2 E05 C10 C13 SING N N 3 E05 C10 O9 SING N N 4 E05 C13 C14 SING N N 5 E05 C14 C15 SING N N 6 E05 C15 C16 SING N N 7 E05 C16 C17 SING N N 8 E05 C6 C7 SING N N 9 E05 C28 C27 DOUB N N 10 E05 C17 C18 SING N N 11 E05 C34 C26 SING N N 12 E05 C34 C32 SING N N 13 E05 C27 C26 SING N N 14 E05 C27 C29 SING N N 15 E05 C31 C32 SING N N 16 E05 C31 C29 SING N N 17 E05 O30 C29 SING N N 18 E05 C26 C25 DOUB N Z 19 E05 C7 C8 SING N N 20 E05 C19 C18 DOUB Y N 21 E05 C19 C23 SING Y N 22 E05 C25 C24 SING N N 23 E05 C32 O33 SING N N 24 E05 C18 C20 SING Y N 25 E05 C8 C24 DOUB N E 26 E05 C8 C23 SING N N 27 E05 C23 C22 DOUB Y N 28 E05 C20 C21 DOUB Y N 29 E05 C22 C21 SING Y N 30 E05 C6 H1 SING N N 31 E05 C6 H2 SING N N 32 E05 C6 H3 SING N N 33 E05 C7 H4 SING N N 34 E05 C7 H5 SING N N 35 E05 O9 H6 SING N N 36 E05 C11 H7 SING N N 37 E05 C11 H8 SING N N 38 E05 C11 H9 SING N N 39 E05 C12 H10 SING N N 40 E05 C12 H11 SING N N 41 E05 C12 H12 SING N N 42 E05 C13 H13 SING N N 43 E05 C13 H14 SING N N 44 E05 C14 H15 SING N N 45 E05 C14 H16 SING N N 46 E05 C15 H17 SING N N 47 E05 C15 H18 SING N N 48 E05 C16 H19 SING N N 49 E05 C16 H20 SING N N 50 E05 C17 H21 SING N N 51 E05 C17 H22 SING N N 52 E05 C19 H23 SING N N 53 E05 C20 H24 SING N N 54 E05 C21 H25 SING N N 55 E05 C22 H26 SING N N 56 E05 C24 H27 SING N N 57 E05 C25 H28 SING N N 58 E05 C28 H29 SING N N 59 E05 C28 H30 SING N N 60 E05 C29 H31 SING N N 61 E05 O30 H32 SING N N 62 E05 C31 H33 SING N N 63 E05 C31 H34 SING N N 64 E05 C32 H35 SING N N 65 E05 O33 H36 SING N N 66 E05 C34 H37 SING N N 67 E05 C34 H38 SING N N 68 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor E05 InChI InChI 1.03 "InChI=1S/C26H38O3/c1-5-21(13-14-22-17-24(27)18-25(28)19(22)2)23-12-9-11-20(16-23)10-7-6-8-15-26(3,4)29/h9,11-14,16,24-25,27-29H,2,5-8,10,15,17-18H2,1,3-4H3/b21-13+,22-14-/t24-,25+/m1/s1" E05 InChIKey InChI 1.03 BQVXPWDQMUNMLU-FIKMVKLPSA-N E05 SMILES_CANONICAL CACTVS 3.385 "CC\C(=C/C=C\1C[C@@H](O)C[C@H](O)C\1=C)c2cccc(CCCCCC(C)(C)O)c2" E05 SMILES CACTVS 3.385 "CCC(=CC=C1C[CH](O)C[CH](O)C1=C)c2cccc(CCCCCC(C)(C)O)c2" E05 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CC/C(=C\C=C/1\C[C@H](C[C@@H](C1=C)O)O)/c2cccc(c2)CCCCCC(C)(C)O" E05 SMILES "OpenEye OEToolkits" 2.0.6 "CCC(=CC=C1CC(CC(C1=C)O)O)c2cccc(c2)CCCCCC(C)(C)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier E05 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(1~{R},3~{S},5~{Z})-4-methylidene-5-[(~{E})-3-[3-(6-methyl-6-oxidanyl-heptyl)phenyl]pent-2-enylidene]cyclohexane-1,3-diol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site E05 "Create component" 2018-02-07 EBI E05 "Initial release" 2018-05-16 RCSB #