data_EFD # _chem_comp.id EFD _chem_comp.name avacopan _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C33 H35 F4 N3 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(2R,3S)-2-[4-(cyclopentylamino)phenyl]-1-(2-fluoro-6-methylbenzene-1-carbonyl)-N-[4-methyl-3-(trifluoromethyl)phenyl]piperidine-3-carboxamide" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-01-08 _chem_comp.pdbx_modified_date 2021-03-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 581.644 _chem_comp.one_letter_code ? _chem_comp.three_letter_code EFD _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6C1R _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal EFD C10 C1 C 0 1 N N N 15.024 4.162 -48.197 -0.813 3.626 1.641 C10 EFD 1 EFD C11 C2 C 0 1 N N R 13.277 3.758 -46.663 -1.318 1.216 2.214 C11 EFD 2 EFD C01 C3 C 0 1 Y N N 13.046 6.072 -50.778 -2.961 4.161 -0.996 C01 EFD 3 EFD C02 C4 C 0 1 Y N N 13.511 6.839 -51.838 -2.944 5.191 -1.913 C02 EFD 4 EFD C03 C5 C 0 1 Y N N 14.424 7.859 -51.611 -1.881 5.327 -2.788 C03 EFD 5 EFD C04 C6 C 0 1 Y N N 14.870 8.108 -50.322 -0.827 4.433 -2.751 C04 EFD 6 EFD C05 C7 C 0 1 Y N N 14.406 7.338 -49.262 -0.829 3.395 -1.837 C05 EFD 7 EFD C06 C8 C 0 1 Y N N 13.497 6.311 -49.490 -1.902 3.253 -0.950 C06 EFD 8 EFD C07 C9 C 0 1 N N N 12.984 5.484 -48.325 -1.913 2.148 0.030 C07 EFD 9 EFD O08 O1 O 0 1 N N N 11.877 5.735 -47.882 -2.414 1.080 -0.265 O08 EFD 10 EFD N09 N1 N 0 1 N N N 13.770 4.443 -47.736 -1.368 2.323 1.250 N09 EFD 11 EFD C12 C10 C 0 1 N N N 15.927 4.107 -47.134 0.627 3.424 2.123 C12 EFD 12 EFD C13 C11 C 0 1 N N N 15.447 3.378 -46.071 0.646 2.373 3.235 C13 EFD 13 EFD C14 C12 C 0 1 N N S 14.240 3.882 -45.657 0.128 1.041 2.688 C14 EFD 14 EFD C15 C13 C 0 1 Y N N 12.791 2.336 -46.997 -1.790 -0.054 1.553 C15 EFD 15 EFD C16 C14 C 0 1 Y N N 11.947 2.150 -48.085 -0.883 -1.054 1.253 C16 EFD 16 EFD C17 C15 C 0 1 Y N N 11.468 0.894 -48.423 -1.313 -2.219 0.648 C17 EFD 17 EFD C18 C16 C 0 1 Y N N 11.805 -0.222 -47.676 -2.657 -2.385 0.341 C18 EFD 18 EFD C19 C17 C 0 1 Y N N 12.640 -0.062 -46.578 -3.566 -1.379 0.645 C19 EFD 19 EFD C20 C18 C 0 1 Y N N 13.125 1.205 -46.245 -3.130 -0.219 1.255 C20 EFD 20 EFD C21 C19 C 0 1 N N N 12.048 4.965 -51.023 -4.118 4.020 -0.040 C21 EFD 21 EFD F22 F1 F 0 1 N N N 14.843 7.590 -48.020 0.201 2.522 -1.801 F22 EFD 22 EFD C23 C20 C 0 1 N N N 13.787 3.340 -44.308 0.988 0.603 1.531 C23 EFD 23 EFD N24 N2 N 0 1 N N N 11.282 -1.496 -48.058 -3.095 -3.562 -0.271 N24 EFD 24 EFD C25 C21 C 0 1 N N N 11.452 -2.469 -47.031 -4.513 -3.736 -0.594 C25 EFD 25 EFD C26 C22 C 0 1 N N N 11.238 -3.845 -47.633 -5.259 -4.344 0.612 C26 EFD 26 EFD C27 C23 C 0 1 N N N 10.153 -4.555 -46.850 -6.292 -5.306 -0.025 C27 EFD 27 EFD C28 C24 C 0 1 N N N 9.835 -3.685 -45.655 -5.507 -5.911 -1.215 C28 EFD 28 EFD C29 C25 C 0 1 N N N 10.400 -2.310 -45.953 -4.671 -4.733 -1.756 C29 EFD 29 EFD O30 O2 O 0 1 N N N 14.593 2.828 -43.550 0.687 0.918 0.399 O30 EFD 30 EFD N31 N3 N 0 1 N N N 12.406 3.438 -43.977 2.091 -0.138 1.754 N31 EFD 31 EFD C32 C26 C 0 1 Y N N 11.791 2.987 -42.773 2.840 -0.620 0.674 C32 EFD 32 EFD C33 C27 C 0 1 Y N N 12.375 2.036 -41.947 4.217 -0.759 0.790 C33 EFD 33 EFD C34 C28 C 0 1 Y N N 11.740 1.616 -40.785 4.954 -1.235 -0.277 C34 EFD 34 EFD C35 C29 C 0 1 Y N N 10.495 2.147 -40.453 4.321 -1.572 -1.460 C35 EFD 35 EFD C36 C30 C 0 1 Y N N 9.907 3.093 -41.280 2.951 -1.434 -1.579 C36 EFD 36 EFD C37 C31 C 0 1 Y N N 10.549 3.509 -42.436 2.208 -0.965 -0.512 C37 EFD 37 EFD C38 C32 C 0 1 N N N 9.766 1.718 -39.197 5.128 -2.090 -2.623 C38 EFD 38 EFD C39 C33 C 0 1 N N N 12.428 0.577 -39.912 6.448 -1.386 -0.153 C39 EFD 39 EFD F40 F2 F 0 1 N N N 12.680 1.085 -38.704 7.079 -0.588 -1.114 F40 EFD 40 EFD F41 F3 F 0 1 N N N 11.654 -0.505 -39.764 6.852 -0.984 1.125 F41 EFD 41 EFD F42 F4 F 0 1 N N N 13.585 0.218 -40.483 6.799 -2.725 -0.354 F42 EFD 42 EFD H1 H1 H 0 1 N N N 15.012 3.191 -48.714 -0.821 4.299 0.784 H1 EFD 43 EFD H2 H2 H 0 1 N N N 15.337 4.948 -48.900 -1.412 4.051 2.447 H2 EFD 44 EFD H3 H3 H 0 1 N N N 12.382 4.296 -46.316 -1.958 1.444 3.066 H3 EFD 45 EFD H4 H4 H 0 1 N N N 13.162 6.641 -52.841 -3.764 5.894 -1.948 H4 EFD 46 EFD H5 H5 H 0 1 N N N 14.786 8.456 -52.435 -1.874 6.135 -3.504 H5 EFD 47 EFD H6 H6 H 0 1 N N N 15.579 8.902 -50.141 -0.001 4.544 -3.437 H6 EFD 48 EFD H7 H7 H 0 1 N N N 16.860 3.643 -47.487 1.244 3.085 1.291 H7 EFD 49 EFD H8 H8 H 0 1 N N N 16.134 5.132 -46.794 1.018 4.367 2.506 H8 EFD 50 EFD H9 H9 H 0 1 N N N 15.317 2.330 -46.378 1.666 2.245 3.596 H9 EFD 51 EFD H10 H10 H 0 1 N N N 16.166 3.430 -45.241 0.009 2.701 4.056 H10 EFD 52 EFD H11 H11 H 0 1 N N N 14.385 4.961 -45.497 0.164 0.287 3.475 H11 EFD 53 EFD H12 H12 H 0 1 N N N 11.658 3.003 -48.681 0.162 -0.923 1.491 H12 EFD 54 EFD H13 H13 H 0 1 N N N 10.822 0.784 -49.282 -0.604 -2.999 0.413 H13 EFD 55 EFD H14 H14 H 0 1 N N N 12.915 -0.919 -45.980 -4.611 -1.506 0.407 H14 EFD 56 EFD H15 H15 H 0 1 N N N 13.773 1.314 -45.387 -3.837 0.562 1.495 H15 EFD 57 EFD H16 H16 H 0 1 N N N 12.584 4.026 -51.228 -3.911 4.587 0.867 H16 EFD 58 EFD H17 H17 H 0 1 N N N 11.415 4.838 -50.132 -5.025 4.403 -0.509 H17 EFD 59 EFD H18 H18 H 0 1 N N N 11.418 5.224 -51.887 -4.255 2.968 0.211 H18 EFD 60 EFD H19 H19 H 0 1 N N N 10.306 -1.399 -48.254 -2.459 -4.264 -0.483 H19 EFD 61 EFD H20 H20 H 0 1 N N N 12.456 -2.407 -46.586 -4.955 -2.777 -0.862 H20 EFD 62 EFD H21 H21 H 0 1 N N N 10.930 -3.745 -48.684 -4.567 -4.895 1.250 H21 EFD 63 EFD H22 H22 H 0 1 N N N 12.173 -4.423 -47.578 -5.764 -3.564 1.181 H22 EFD 64 EFD H23 H23 H 0 1 N N N 9.257 -4.682 -47.475 -6.583 -6.083 0.681 H23 EFD 65 EFD H24 H24 H 0 1 N N N 10.510 -5.540 -46.516 -7.165 -4.756 -0.378 H24 EFD 66 EFD H25 H25 H 0 1 N N N 8.746 -3.624 -45.510 -4.856 -6.715 -0.873 H25 EFD 67 EFD H26 H26 H 0 1 N N N 10.303 -4.099 -44.750 -6.193 -6.277 -1.979 H26 EFD 68 EFD H27 H27 H 0 1 N N N 10.855 -1.887 -45.045 -5.190 -4.257 -2.588 H27 EFD 69 EFD H28 H28 H 0 1 N N N 9.599 -1.644 -46.306 -3.692 -5.087 -2.079 H28 EFD 70 EFD H29 H29 H 0 1 N N N 11.809 3.865 -44.656 2.366 -0.338 2.662 H29 EFD 71 EFD H30 H30 H 0 1 N N N 13.335 1.618 -42.211 4.712 -0.495 1.713 H30 EFD 72 EFD H31 H31 H 0 1 N N N 8.944 3.508 -41.022 2.460 -1.698 -2.504 H31 EFD 73 EFD H32 H32 H 0 1 N N N 10.082 4.242 -43.077 1.136 -0.863 -0.604 H32 EFD 74 EFD H33 H33 H 0 1 N N N 9.121 0.856 -39.423 5.197 -3.176 -2.562 H33 EFD 75 EFD H34 H34 H 0 1 N N N 10.498 1.436 -38.426 4.641 -1.809 -3.557 H34 EFD 76 EFD H35 H35 H 0 1 N N N 9.149 2.551 -38.829 6.129 -1.660 -2.591 H35 EFD 77 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal EFD C02 C03 DOUB Y N 1 EFD C02 C01 SING Y N 2 EFD C03 C04 SING Y N 3 EFD C21 C01 SING N N 4 EFD C01 C06 DOUB Y N 5 EFD C04 C05 DOUB Y N 6 EFD C06 C05 SING Y N 7 EFD C06 C07 SING N N 8 EFD C05 F22 SING N N 9 EFD C17 C16 DOUB Y N 10 EFD C17 C18 SING Y N 11 EFD C07 O08 DOUB N N 12 EFD C07 N09 SING N N 13 EFD C10 N09 SING N N 14 EFD C10 C12 SING N N 15 EFD C16 C15 SING Y N 16 EFD N24 C18 SING N N 17 EFD N24 C25 SING N N 18 EFD N09 C11 SING N N 19 EFD C18 C19 DOUB Y N 20 EFD C26 C25 SING N N 21 EFD C26 C27 SING N N 22 EFD C12 C13 SING N N 23 EFD C25 C29 SING N N 24 EFD C15 C11 SING N N 25 EFD C15 C20 DOUB Y N 26 EFD C27 C28 SING N N 27 EFD C11 C14 SING N N 28 EFD C19 C20 SING Y N 29 EFD C13 C14 SING N N 30 EFD C29 C28 SING N N 31 EFD C14 C23 SING N N 32 EFD C23 N31 SING N N 33 EFD C23 O30 DOUB N N 34 EFD N31 C32 SING N N 35 EFD C32 C37 DOUB Y N 36 EFD C32 C33 SING Y N 37 EFD C37 C36 SING Y N 38 EFD C33 C34 DOUB Y N 39 EFD C36 C35 DOUB Y N 40 EFD C34 C35 SING Y N 41 EFD C34 C39 SING N N 42 EFD F42 C39 SING N N 43 EFD C35 C38 SING N N 44 EFD C39 F41 SING N N 45 EFD C39 F40 SING N N 46 EFD C10 H1 SING N N 47 EFD C10 H2 SING N N 48 EFD C11 H3 SING N N 49 EFD C02 H4 SING N N 50 EFD C03 H5 SING N N 51 EFD C04 H6 SING N N 52 EFD C12 H7 SING N N 53 EFD C12 H8 SING N N 54 EFD C13 H9 SING N N 55 EFD C13 H10 SING N N 56 EFD C14 H11 SING N N 57 EFD C16 H12 SING N N 58 EFD C17 H13 SING N N 59 EFD C19 H14 SING N N 60 EFD C20 H15 SING N N 61 EFD C21 H16 SING N N 62 EFD C21 H17 SING N N 63 EFD C21 H18 SING N N 64 EFD N24 H19 SING N N 65 EFD C25 H20 SING N N 66 EFD C26 H21 SING N N 67 EFD C26 H22 SING N N 68 EFD C27 H23 SING N N 69 EFD C27 H24 SING N N 70 EFD C28 H25 SING N N 71 EFD C28 H26 SING N N 72 EFD C29 H27 SING N N 73 EFD C29 H28 SING N N 74 EFD N31 H29 SING N N 75 EFD C33 H30 SING N N 76 EFD C36 H31 SING N N 77 EFD C37 H32 SING N N 78 EFD C38 H33 SING N N 79 EFD C38 H34 SING N N 80 EFD C38 H35 SING N N 81 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor EFD SMILES ACDLabs 12.01 "C1N(C(C(CC1)C(Nc2ccc(c(c2)C(F)(F)F)C)=O)c3ccc(cc3)NC4CCCC4)C(c5c(cccc5F)C)=O" EFD InChI InChI 1.03 "InChI=1S/C33H35F4N3O2/c1-20-12-15-25(19-27(20)33(35,36)37)39-31(41)26-10-6-18-40(32(42)29-21(2)7-5-11-28(29)34)30(26)22-13-16-24(17-14-22)38-23-8-3-4-9-23/h5,7,11-17,19,23,26,30,38H,3-4,6,8-10,18H2,1-2H3,(H,39,41)/t26-,30-/m0/s1" EFD InChIKey InChI 1.03 PUKBOVABABRILL-YZNIXAGQSA-N EFD SMILES_CANONICAL CACTVS 3.385 "Cc1ccc(NC(=O)[C@H]2CCCN([C@H]2c3ccc(NC4CCCC4)cc3)C(=O)c5c(C)cccc5F)cc1C(F)(F)F" EFD SMILES CACTVS 3.385 "Cc1ccc(NC(=O)[CH]2CCCN([CH]2c3ccc(NC4CCCC4)cc3)C(=O)c5c(C)cccc5F)cc1C(F)(F)F" EFD SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "Cc1cccc(c1C(=O)N2CCC[C@@H]([C@@H]2c3ccc(cc3)NC4CCCC4)C(=O)Nc5ccc(c(c5)C(F)(F)F)C)F" EFD SMILES "OpenEye OEToolkits" 2.0.6 "Cc1cccc(c1C(=O)N2CCCC(C2c3ccc(cc3)NC4CCCC4)C(=O)Nc5ccc(c(c5)C(F)(F)F)C)F" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier EFD "SYSTEMATIC NAME" ACDLabs 12.01 "(2R,3S)-2-[4-(cyclopentylamino)phenyl]-1-(2-fluoro-6-methylbenzene-1-carbonyl)-N-[4-methyl-3-(trifluoromethyl)phenyl]piperidine-3-carboxamide" EFD "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{R},3~{S})-2-[4-(cyclopentylamino)phenyl]-1-(2-fluoranyl-6-methyl-phenyl)carbonyl-~{N}-[4-methyl-3-(trifluoromethyl)phenyl]piperidine-3-carboxamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site EFD "Create component" 2018-01-08 RCSB EFD "Initial release" 2018-05-30 RCSB EFD "Modify synonyms" 2021-03-13 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id EFD _pdbx_chem_comp_synonyms.name "(2R,3S)-2-[4-(cyclopentylamino)phenyl]-1-(2-fluoro-6-methylbenzene-1-carbonyl)-N-[4-methyl-3-(trifluoromethyl)phenyl]piperidine-3-carboxamide" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? ##