data_EJJ # _chem_comp.id EJJ _chem_comp.name N-CARBAMOYL-GLYCINE _chem_comp.type "PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C3 H6 N2 O3" _chem_comp.mon_nstd_parent_comp_id GLY _chem_comp.pdbx_synonyms "2-(aminocarbonylamino)ethanoic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-01-22 _chem_comp.pdbx_modified_date 2024-12-20 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 118.091 _chem_comp.one_letter_code G _chem_comp.three_letter_code EJJ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal EJJ N1 N1 N 0 1 N N N N N N -2.374 1.133 -0.743 2.842 -0.868 -0.000 N1 EJJ 1 EJJ C1 C1 C 0 1 N N N N N N -1.608 0.043 -0.690 1.854 0.049 -0.000 C1 EJJ 2 EJJ O1 O1 O 0 1 N N N N N N -2.074 -1.077 -0.914 2.125 1.234 0.000 O1 EJJ 3 EJJ N N N 0 1 N N N Y Y N -0.306 0.213 -0.383 0.566 -0.348 -0.000 N EJJ 4 EJJ CA CA C 0 1 N N N N Y N 0.606 -0.894 -0.299 -0.508 0.648 0.000 CA EJJ 5 EJJ C C C 0 1 N N N N Y Y 2.013 -0.498 0.057 -1.842 -0.051 0.000 C EJJ 6 EJJ OXT OXT O 0 1 N Y N N Y Y 2.091 0.034 1.250 -2.977 0.667 0.000 OXT EJJ 7 EJJ O O O 0 1 N N N N Y Y 2.952 -0.657 -0.683 -1.892 -1.259 -0.000 O EJJ 8 EJJ H1 H1 H 0 1 N N N N N N -3.345 1.051 -0.968 3.769 -0.583 -0.000 H1 EJJ 9 EJJ H2 H2 H 0 1 N N N N N N -1.977 2.032 -0.558 2.626 -1.814 0.004 H2 EJJ 10 EJJ H H H 0 1 N N N Y Y N 0.035 1.137 -0.209 0.350 -1.294 -0.000 H EJJ 11 EJJ HA2 HA2 H 0 1 N N N N Y N 0.237 -1.589 0.469 -0.424 1.272 0.890 HA2 EJJ 12 EJJ HA3 HA3 H 0 1 N N N N Y N 0.625 -1.402 -1.275 -0.424 1.272 -0.890 HA3 EJJ 13 EJJ HXT HXT H 0 1 N Y N N Y Y 2.993 0.270 1.434 -3.808 0.174 0.000 HXT EJJ 14 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal EJJ N1 C1 SING N N 1 EJJ C1 O1 DOUB N N 2 EJJ C1 N SING N N 3 EJJ N CA SING N N 4 EJJ CA C SING N N 5 EJJ C OXT SING N N 6 EJJ C O DOUB N N 7 EJJ N1 H1 SING N N 8 EJJ N1 H2 SING N N 9 EJJ N H SING N N 10 EJJ CA HA2 SING N N 11 EJJ CA HA3 SING N N 12 EJJ OXT HXT SING N N 13 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor EJJ InChI InChI 1.06 "InChI=1S/C3H6N2O3/c4-3(8)5-1-2(6)7/h1H2,(H,6,7)(H3,4,5,8)" EJJ InChIKey InChI 1.06 KZVRXPPUJQRGFN-UHFFFAOYSA-N EJJ SMILES_CANONICAL CACTVS 3.385 "NC(=O)NCC(O)=O" EJJ SMILES CACTVS 3.385 "NC(=O)NCC(O)=O" EJJ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C(C(=O)O)NC(=O)N" EJJ SMILES "OpenEye OEToolkits" 2.0.7 "C(C(=O)O)NC(=O)N" # _pdbx_chem_comp_identifier.comp_id EJJ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-(aminocarbonylamino)ethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site EJJ "Create component" 2024-02-14 PDBE EJJ "Modify descriptor" 2024-02-14 PDBE EJJ "Other modification" 2024-02-14 PDBE EJJ "Modify PCM" 2024-09-27 PDBE EJJ "Initial release" 2024-12-25 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id EJJ _pdbx_chem_comp_synonyms.name "2-(aminocarbonylamino)ethanoic acid" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id EJJ _pdbx_chem_comp_pcm.modified_residue_id GLY _pdbx_chem_comp_pcm.type Carbamoylation _pdbx_chem_comp_pcm.category "Named protein modification" _pdbx_chem_comp_pcm.position "Amino-acid backbone" _pdbx_chem_comp_pcm.polypeptide_position N-terminal _pdbx_chem_comp_pcm.comp_id_linking_atom ? _pdbx_chem_comp_pcm.modified_residue_id_linking_atom ? _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #