data_EKB # _chem_comp.id EKB _chem_comp.name "6-ethyl-5-[3-(3,4,5-trimethoxyphenyl)prop-1-yn-1-yl]pyrimidine-2,4-diamine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H22 N4 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2009-09-18 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 342.392 _chem_comp.one_letter_code ? _chem_comp.three_letter_code EKB _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3JVX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal EKB N1 N1 N 0 1 Y N N 42.427 -22.194 -0.906 -4.079 1.159 -1.659 N1 EKB 1 EKB C2 C2 C 0 1 Y N N 41.966 -21.469 -1.943 -5.234 0.850 -1.089 C2 EKB 2 EKB N3 N3 N 0 1 Y N N 42.043 -21.935 -3.196 -5.296 0.176 0.051 N3 EKB 3 EKB C4 C4 C 0 1 Y N N 42.571 -23.133 -3.475 -4.197 -0.219 0.672 C4 EKB 4 EKB C5 C5 C 0 1 Y N N 43.054 -23.903 -2.417 -2.955 0.082 0.111 C5 EKB 5 EKB C6 C6 C 0 1 Y N N 42.976 -23.406 -1.118 -2.928 0.800 -1.102 C6 EKB 6 EKB C1A C1A C 0 1 N N N 41.278 -24.231 -5.272 -4.346 -2.484 1.671 C1A EKB 7 EKB C1B C1B C 0 1 N N N 45.130 -30.790 -7.097 3.301 3.050 1.859 C1B EKB 8 EKB C1C C1C C 0 1 N N N 48.391 -24.669 -5.335 3.148 -3.108 -1.785 C1C EKB 9 EKB C1D C1D C 0 1 N N N 46.693 -26.897 -9.226 6.206 0.308 -0.664 C1D EKB 10 EKB N1E N1E N 0 1 N N N 41.419 -20.276 -1.762 -6.410 1.242 -1.702 N1E EKB 11 EKB N1F N1F N 0 1 N N N 43.438 -24.140 -0.104 -1.725 1.124 -1.701 N1F EKB 12 EKB C1G C1G C 0 1 N N N 44.119 -26.286 -2.898 -0.745 -0.662 1.274 C1G EKB 13 EKB C1H C1H C 0 1 N N N 43.632 -25.189 -2.669 -1.741 -0.327 0.750 C1H EKB 14 EKB C1I C1I C 0 1 Y N N 45.340 -28.642 -5.425 2.246 0.614 1.345 C1I EKB 15 EKB C1J C1J C 0 1 Y N N 46.257 -26.480 -4.868 2.195 -1.448 0.126 C1J EKB 16 EKB C1K C1K C 0 1 N N N 42.604 -23.558 -4.944 -4.285 -0.984 1.967 C1K EKB 17 EKB C1L C1L C 0 1 N N N 44.701 -27.596 -3.201 0.503 -1.082 1.932 C1L EKB 18 EKB O1O O1O O 0 1 N N N 45.950 -29.667 -7.528 3.882 2.260 0.820 O1O EKB 19 EKB O1P O1P O 0 1 N N N 47.752 -25.382 -6.423 3.776 -1.837 -1.609 O1P EKB 20 EKB O1Q O1Q O 0 1 N N N 47.531 -27.460 -8.152 4.903 0.633 -1.153 O1Q EKB 21 EKB C1S C1S C 0 1 Y N N 45.452 -27.572 -4.540 1.681 -0.626 1.111 C1S EKB 22 EKB C1V C1V C 0 1 Y N N 46.039 -28.622 -6.641 3.327 1.040 0.588 C1V EKB 23 EKB C1W C1W C 0 1 Y N N 46.959 -26.446 -6.075 3.272 -1.027 -0.640 C1W EKB 24 EKB C1Y C1Y C 0 1 Y N N 46.842 -27.514 -6.964 3.842 0.219 -0.407 C1Y EKB 25 EKB H1A H1A H 0 1 N N N 41.277 -24.547 -6.326 -4.409 -3.037 2.608 H1A EKB 26 EKB H1AA H1AA H 0 0 N N N 41.144 -25.111 -4.626 -5.224 -2.698 1.063 H1AA EKB 27 EKB H1AB H1AB H 0 0 N N N 40.455 -23.522 -5.101 -3.447 -2.784 1.132 H1AB EKB 28 EKB H1B H1B H 0 1 N N N 45.129 -31.565 -7.878 2.254 3.244 1.626 H1B EKB 29 EKB H1BA H1BA H 0 0 N N N 45.541 -31.208 -6.167 3.369 2.513 2.805 H1BA EKB 30 EKB H1BB H1BB H 0 0 N N N 44.100 -30.446 -6.921 3.837 3.996 1.939 H1BB EKB 31 EKB H1C H1C H 0 1 N N N 48.995 -23.844 -5.741 2.098 -2.962 -2.042 H1C EKB 32 EKB H1CA H1CA H 0 0 N N N 47.622 -24.263 -4.661 3.646 -3.652 -2.587 H1CA EKB 33 EKB H1CB H1CB H 0 0 N N N 49.041 -25.359 -4.777 3.219 -3.680 -0.859 H1CB EKB 34 EKB H1D H1D H 0 1 N N N 47.269 -26.866 -10.163 6.347 0.756 0.320 H1D EKB 35 EKB H1DA H1DA H 0 0 N N N 45.802 -27.527 -9.364 6.306 -0.774 -0.589 H1DA EKB 36 EKB H1DB H1DB H 0 0 N N N 46.383 -25.878 -8.952 6.958 0.696 -1.351 H1DB EKB 37 EKB HN1E HN1E H 0 0 N N N 41.422 -20.052 -0.787 -6.381 1.736 -2.536 HN1E EKB 38 EKB HN1A HN1A H 0 0 N N N 41.945 -19.589 -2.263 -7.264 1.023 -1.297 HN1A EKB 39 EKB HN1F HN1F H 0 0 N N N 43.302 -23.646 0.755 -0.889 0.857 -1.287 HN1F EKB 40 EKB HN1B HN1B H 0 0 N N N 42.945 -25.009 -0.070 -1.716 1.618 -2.536 HN1B EKB 41 EKB H1I H1I H 0 1 N N N 44.715 -29.487 -5.175 1.842 1.253 2.116 H1I EKB 42 EKB H1J H1J H 0 1 N N N 46.338 -25.651 -4.180 1.751 -2.416 -0.054 H1J EKB 43 EKB H1K H1K H 0 1 N N N 42.746 -22.676 -5.586 -3.406 -0.769 2.576 H1K EKB 44 EKB H1KA H1KA H 0 0 N N N 43.433 -24.261 -5.112 -5.183 -0.683 2.507 H1KA EKB 45 EKB H1L H1L H 0 1 N N N 45.406 -27.867 -2.401 0.558 -0.637 2.925 H1L EKB 46 EKB H1LA H1LA H 0 0 N N N 43.893 -28.340 -3.258 0.520 -2.169 2.019 H1LA EKB 47 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal EKB C2 N1 DOUB Y N 1 EKB C6 N1 SING Y N 2 EKB N3 C2 SING Y N 3 EKB C2 N1E SING N N 4 EKB C4 N3 DOUB Y N 5 EKB C1K C4 SING N N 6 EKB C4 C5 SING Y N 7 EKB C1H C5 SING N N 8 EKB C5 C6 DOUB Y N 9 EKB C6 N1F SING N N 10 EKB C1A C1K SING N N 11 EKB C1A H1A SING N N 12 EKB C1A H1AA SING N N 13 EKB C1A H1AB SING N N 14 EKB O1O C1B SING N N 15 EKB C1B H1B SING N N 16 EKB C1B H1BA SING N N 17 EKB C1B H1BB SING N N 18 EKB O1P C1C SING N N 19 EKB C1C H1C SING N N 20 EKB C1C H1CA SING N N 21 EKB C1C H1CB SING N N 22 EKB C1D O1Q SING N N 23 EKB C1D H1D SING N N 24 EKB C1D H1DA SING N N 25 EKB C1D H1DB SING N N 26 EKB N1E HN1E SING N N 27 EKB N1E HN1A SING N N 28 EKB N1F HN1F SING N N 29 EKB N1F HN1B SING N N 30 EKB C1L C1G SING N N 31 EKB C1G C1H TRIP N N 32 EKB C1V C1I DOUB Y N 33 EKB C1I C1S SING Y N 34 EKB C1I H1I SING N N 35 EKB C1W C1J SING Y N 36 EKB C1J C1S DOUB Y N 37 EKB C1J H1J SING N N 38 EKB C1K H1K SING N N 39 EKB C1K H1KA SING N N 40 EKB C1S C1L SING N N 41 EKB C1L H1L SING N N 42 EKB C1L H1LA SING N N 43 EKB O1O C1V SING N N 44 EKB O1P C1W SING N N 45 EKB O1Q C1Y SING N N 46 EKB C1Y C1V SING Y N 47 EKB C1Y C1W DOUB Y N 48 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor EKB SMILES ACDLabs 11.02 "n2c(c(C#CCc1cc(OC)c(OC)c(OC)c1)c(nc2N)N)CC" EKB SMILES_CANONICAL CACTVS 3.352 "CCc1nc(N)nc(N)c1C#CCc2cc(OC)c(OC)c(OC)c2" EKB SMILES CACTVS 3.352 "CCc1nc(N)nc(N)c1C#CCc2cc(OC)c(OC)c(OC)c2" EKB SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CCc1c(c(nc(n1)N)N)C#CCc2cc(c(c(c2)OC)OC)OC" EKB SMILES "OpenEye OEToolkits" 1.7.0 "CCc1c(c(nc(n1)N)N)C#CCc2cc(c(c(c2)OC)OC)OC" EKB InChI InChI 1.03 "InChI=1S/C18H22N4O3/c1-5-13-12(17(19)22-18(20)21-13)8-6-7-11-9-14(23-2)16(25-4)15(10-11)24-3/h9-10H,5,7H2,1-4H3,(H4,19,20,21,22)" EKB InChIKey InChI 1.03 VPNXKXUNASBBLU-UHFFFAOYSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier EKB "SYSTEMATIC NAME" ACDLabs 11.02 "6-ethyl-5-[3-(3,4,5-trimethoxyphenyl)prop-1-yn-1-yl]pyrimidine-2,4-diamine" EKB "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "6-ethyl-5-[3-(3,4,5-trimethoxyphenyl)prop-1-ynyl]pyrimidine-2,4-diamine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site EKB "Create component" 2009-09-18 RCSB EKB "Modify aromatic_flag" 2011-06-04 RCSB EKB "Modify descriptor" 2011-06-04 RCSB #