data_F4X # _chem_comp.id F4X _chem_comp.name "8-[2-[(E)-2-[4-[(2S,3R,4S,5R,6R)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxyphenyl]ethenyl]-3,3-dimethyl-indol-1-ium-1-yl]octanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C32 H42 N O8" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2020-03-31 _chem_comp.pdbx_modified_date 2021-02-26 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 568.678 _chem_comp.one_letter_code ? _chem_comp.three_letter_code F4X _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7BRS _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal F4X O01 O1 O 0 1 N N N -13.763 -27.832 34.884 -4.462 -1.877 0.174 O01 F4X 1 F4X C02 C1 C 0 1 N N S -14.568 -28.909 34.544 -5.735 -1.521 -0.370 C02 F4X 2 F4X O03 O2 O 0 1 N N N -15.005 -29.476 35.746 -6.293 -0.445 0.387 O03 F4X 3 F4X C04 C2 C 0 1 N N R -15.506 -30.790 35.663 -7.561 0.008 -0.091 C04 F4X 4 F4X C05 C3 C 0 1 N N R -14.449 -31.737 35.123 -8.573 -1.139 -0.015 C05 F4X 5 F4X C06 C4 C 0 1 N N S -14.090 -31.305 33.721 -8.052 -2.324 -0.834 C06 F4X 6 F4X C07 C5 C 0 1 N N R -13.612 -29.847 33.784 -6.673 -2.729 -0.305 C07 F4X 7 F4X C08 C6 C 0 1 N N N -15.955 -31.234 37.058 -8.045 1.173 0.774 C08 F4X 8 F4X O09 O3 O 0 1 N N N -16.582 -32.481 36.986 -7.162 2.285 0.613 O09 F4X 9 F4X O10 O4 O 0 1 N N N -13.049 -32.135 33.253 -8.955 -3.425 -0.709 O10 F4X 10 F4X O11 O5 O 0 1 N N N -13.430 -29.302 32.516 -6.146 -3.787 -1.108 O11 F4X 11 F4X O12 O6 O 0 1 N N N -13.261 -31.651 35.892 -8.742 -1.537 1.347 O12 F4X 12 F4X C13 C7 C 0 1 Y N N -14.429 -26.585 34.877 -3.477 -0.945 0.097 C13 F4X 13 F4X C14 C8 C 0 1 Y N N -15.933 -26.441 34.582 -3.736 0.290 -0.486 C14 F4X 14 F4X C15 C9 C 0 1 Y N N -16.490 -25.232 34.589 -2.741 1.238 -0.566 C15 F4X 15 F4X C16 C10 C 0 1 Y N N -15.636 -23.995 34.881 -1.467 0.956 -0.058 C16 F4X 16 F4X C17 C11 C 0 1 Y N N -14.350 -24.114 35.135 -1.212 -0.289 0.528 C17 F4X 17 F4X C18 C12 C 0 1 Y N N -13.710 -25.506 35.130 -2.216 -1.228 0.608 C18 F4X 18 F4X C19 C13 C 0 1 N N N -16.193 -22.622 35.024 -0.401 1.965 -0.141 C19 F4X 19 F4X C20 C14 C 0 1 N N N -17.484 -22.272 34.962 0.829 1.690 0.350 C20 F4X 20 F4X C21 C15 C 0 1 N N N -18.013 -21.122 35.410 1.884 2.612 0.168 C21 F4X 21 F4X N22 N1 N 1 1 N N N -17.684 -20.277 36.503 3.123 2.447 0.535 N22 F4X 22 F4X C23 C16 C 0 1 Y N N -18.624 -19.249 36.596 3.930 3.500 0.233 C23 F4X 23 F4X C24 C17 C 0 1 Y N N -19.555 -19.360 35.572 3.194 4.504 -0.407 C24 F4X 24 F4X C25 C18 C 0 1 N N N -19.286 -20.601 34.769 1.783 3.970 -0.496 C25 F4X 25 F4X C26 C19 C 0 1 Y N N -18.781 -18.246 37.568 5.298 3.709 0.457 C26 F4X 26 F4X C27 C20 C 0 1 Y N N -19.826 -17.310 37.421 5.891 4.884 0.049 C27 F4X 27 F4X C28 C21 C 0 1 Y N N -20.723 -17.401 36.337 5.147 5.865 -0.582 C28 F4X 28 F4X C29 C22 C 0 1 Y N N -20.606 -18.446 35.405 3.794 5.670 -0.809 C29 F4X 29 F4X C30 C23 C 0 1 N N N -19.040 -20.278 33.284 1.344 3.827 -1.955 C30 F4X 30 F4X C31 C24 C 0 1 N N N -20.410 -21.623 34.907 0.816 4.875 0.270 C31 F4X 31 F4X C32 C25 C 0 1 N N N -16.901 -20.660 37.729 3.603 1.239 1.211 C32 F4X 32 F4X C33 C26 C 0 1 N N N -15.472 -20.085 37.673 4.590 0.504 0.301 C33 F4X 33 F4X C34 C27 C 0 1 N N N -14.507 -20.730 38.696 5.092 -0.757 1.007 C34 F4X 34 F4X C35 C28 C 0 1 N N N -13.020 -20.665 38.264 6.079 -1.492 0.098 C35 F4X 35 F4X C36 C29 C 0 1 N N N -12.717 -21.664 37.128 6.581 -2.753 0.804 C36 F4X 36 F4X C37 C30 C 0 1 N N N -11.974 -21.155 35.864 7.568 -3.488 -0.105 C37 F4X 37 F4X C38 C31 C 0 1 N N N -12.688 -20.104 34.985 8.069 -4.750 0.600 C38 F4X 38 F4X C39 C32 C 0 1 N N N -12.070 -18.701 35.053 9.042 -5.473 -0.295 C39 F4X 39 F4X O40 O7 O 0 1 N N N -11.758 -18.179 33.997 9.306 -5.026 -1.386 O40 F4X 40 F4X O41 O8 O 0 1 N N N -11.888 -18.195 36.146 9.614 -6.615 0.119 O41 F4X 41 F4X H1 H1 H 0 1 N N N -15.406 -28.617 33.894 -5.613 -1.211 -1.408 H1 F4X 42 F4X H2 H2 H 0 1 N N N -16.377 -30.820 34.992 -7.463 0.338 -1.125 H2 F4X 43 F4X H3 H3 H 0 1 N N N -14.842 -32.764 35.109 -9.530 -0.808 -0.419 H3 F4X 44 F4X H4 H4 H 0 1 N N N -14.976 -31.372 33.072 -7.971 -2.035 -1.882 H4 F4X 45 F4X H5 H5 H 0 1 N N N -12.652 -29.840 34.321 -6.764 -3.065 0.728 H5 F4X 46 F4X H6 H6 H 0 1 N N N -15.077 -31.306 37.717 -9.051 1.461 0.466 H6 F4X 47 F4X H7 H7 H 0 1 N N N -16.660 -30.495 37.466 -8.059 0.869 1.820 H7 F4X 48 F4X H8 H8 H 0 1 N N N -16.857 -32.748 37.855 -7.408 3.062 1.133 H8 F4X 49 F4X H9 H9 H 0 1 N N N -13.352 -33.035 33.217 -8.684 -4.213 -1.198 H9 F4X 50 F4X H10 H10 H 0 1 N N N -13.135 -28.403 32.597 -5.273 -4.095 -0.830 H10 F4X 51 F4X H11 H11 H 0 1 N N N -13.442 -31.915 36.786 -9.370 -2.261 1.470 H11 F4X 52 F4X H12 H12 H 0 1 N N N -16.532 -27.315 34.371 -4.719 0.506 -0.877 H12 F4X 53 F4X H13 H13 H 0 1 N N N -17.546 -25.123 34.388 -2.943 2.197 -1.020 H13 F4X 54 F4X H14 H14 H 0 1 N N N -13.752 -23.239 35.345 -0.231 -0.511 0.921 H14 F4X 55 F4X H15 H15 H 0 1 N N N -12.655 -25.607 35.337 -2.021 -2.188 1.063 H15 F4X 56 F4X H16 H16 H 0 1 N N N -15.483 -21.826 35.195 -0.600 2.924 -0.595 H16 F4X 57 F4X H17 H17 H 0 1 N N N -18.163 -22.980 34.510 1.005 0.767 0.881 H17 F4X 58 F4X H19 H19 H 0 1 N N N -18.112 -18.193 38.414 5.887 2.949 0.949 H19 F4X 59 F4X H20 H20 H 0 1 N N N -19.940 -16.517 38.145 6.945 5.040 0.223 H20 F4X 60 F4X H21 H21 H 0 1 N N N -21.504 -16.664 36.222 5.621 6.783 -0.898 H21 F4X 61 F4X H22 H22 H 0 1 N N N -21.303 -18.542 34.586 3.212 6.435 -1.302 H22 F4X 62 F4X H23 H23 H 0 1 N N N -18.228 -19.541 33.198 1.317 4.810 -2.425 H23 F4X 63 F4X H24 H24 H 0 1 N N N -18.758 -21.198 32.751 2.051 3.189 -2.486 H24 F4X 64 F4X H25 H25 H 0 1 N N N -19.959 -19.865 32.842 0.351 3.379 -1.994 H25 F4X 65 F4X H26 H26 H 0 1 N N N -20.576 -21.845 35.972 1.175 5.008 1.291 H26 F4X 66 F4X H27 H27 H 0 1 N N N -21.333 -21.214 34.470 0.758 5.845 -0.224 H27 F4X 67 F4X H28 H28 H 0 1 N N N -20.132 -22.547 34.379 -0.173 4.418 0.289 H28 F4X 68 F4X H29 H29 H 0 1 N N N -17.412 -20.267 38.620 4.102 1.516 2.139 H29 F4X 69 F4X H30 H30 H 0 1 N N N -16.845 -21.757 37.792 2.759 0.586 1.432 H30 F4X 70 F4X H31 H31 H 0 1 N N N -15.070 -20.250 36.663 4.092 0.227 -0.627 H31 F4X 71 F4X H32 H32 H 0 1 N N N -15.523 -19.005 37.875 5.435 1.156 0.080 H32 F4X 72 F4X H33 H33 H 0 1 N N N -14.615 -20.204 39.656 5.591 -0.480 1.936 H33 F4X 73 F4X H34 H34 H 0 1 N N N -14.788 -21.786 38.822 4.248 -1.410 1.229 H34 F4X 74 F4X H35 H35 H 0 1 N N N -12.385 -20.905 39.130 5.581 -1.769 -0.831 H35 F4X 75 F4X H36 H36 H 0 1 N N N -12.794 -19.647 37.915 6.924 -0.840 -0.124 H36 F4X 76 F4X H37 H37 H 0 1 N N N -13.681 -22.075 36.793 7.079 -2.476 1.733 H37 F4X 77 F4X H38 H38 H 0 1 N N N -12.105 -22.470 37.560 5.736 -3.406 1.026 H38 F4X 78 F4X H39 H39 H 0 1 N N N -11.769 -22.030 35.229 7.069 -3.766 -1.034 H39 F4X 79 F4X H40 H40 H 0 1 N N N -11.023 -20.713 36.197 8.412 -2.836 -0.327 H40 F4X 80 F4X H41 H41 H 0 1 N N N -13.736 -20.035 35.312 8.568 -4.472 1.529 H41 F4X 81 F4X H42 H42 H 0 1 N N N -12.652 -20.446 33.940 7.225 -5.402 0.822 H42 F4X 82 F4X H43 H43 H 0 1 N N N -11.473 -17.347 36.038 10.231 -7.043 -0.490 H43 F4X 83 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal F4X O11 C07 SING N N 1 F4X O10 C06 SING N N 2 F4X C30 C25 SING N N 3 F4X C06 C07 SING N N 4 F4X C06 C05 SING N N 5 F4X C07 C02 SING N N 6 F4X O40 C39 DOUB N N 7 F4X C02 O01 SING N N 8 F4X C02 O03 SING N N 9 F4X C14 C15 DOUB Y N 10 F4X C14 C13 SING Y N 11 F4X C15 C16 SING Y N 12 F4X C25 C31 SING N N 13 F4X C25 C21 SING N N 14 F4X C25 C24 SING N N 15 F4X C13 O01 SING N N 16 F4X C13 C18 DOUB Y N 17 F4X C16 C19 SING N N 18 F4X C16 C17 DOUB Y N 19 F4X C20 C19 DOUB N E 20 F4X C20 C21 SING N N 21 F4X C38 C39 SING N N 22 F4X C38 C37 SING N N 23 F4X C39 O41 SING N N 24 F4X C05 C04 SING N N 25 F4X C05 O12 SING N N 26 F4X C18 C17 SING Y N 27 F4X C29 C24 DOUB Y N 28 F4X C29 C28 SING Y N 29 F4X C21 N22 DOUB N N 30 F4X C24 C23 SING Y N 31 F4X C04 O03 SING N N 32 F4X C04 C08 SING N N 33 F4X C37 C36 SING N N 34 F4X C28 C27 DOUB Y N 35 F4X N22 C23 SING N N 36 F4X N22 C32 SING N N 37 F4X C23 C26 DOUB Y N 38 F4X O09 C08 SING N N 39 F4X C36 C35 SING N N 40 F4X C27 C26 SING Y N 41 F4X C33 C32 SING N N 42 F4X C33 C34 SING N N 43 F4X C35 C34 SING N N 44 F4X C02 H1 SING N N 45 F4X C04 H2 SING N N 46 F4X C05 H3 SING N N 47 F4X C06 H4 SING N N 48 F4X C07 H5 SING N N 49 F4X C08 H6 SING N N 50 F4X C08 H7 SING N N 51 F4X O09 H8 SING N N 52 F4X O10 H9 SING N N 53 F4X O11 H10 SING N N 54 F4X O12 H11 SING N N 55 F4X C14 H12 SING N N 56 F4X C15 H13 SING N N 57 F4X C17 H14 SING N N 58 F4X C18 H15 SING N N 59 F4X C19 H16 SING N N 60 F4X C20 H17 SING N N 61 F4X C26 H19 SING N N 62 F4X C27 H20 SING N N 63 F4X C28 H21 SING N N 64 F4X C29 H22 SING N N 65 F4X C30 H23 SING N N 66 F4X C30 H24 SING N N 67 F4X C30 H25 SING N N 68 F4X C31 H26 SING N N 69 F4X C31 H27 SING N N 70 F4X C31 H28 SING N N 71 F4X C32 H29 SING N N 72 F4X C32 H30 SING N N 73 F4X C33 H31 SING N N 74 F4X C33 H32 SING N N 75 F4X C34 H33 SING N N 76 F4X C34 H34 SING N N 77 F4X C35 H35 SING N N 78 F4X C35 H36 SING N N 79 F4X C36 H37 SING N N 80 F4X C36 H38 SING N N 81 F4X C37 H39 SING N N 82 F4X C37 H40 SING N N 83 F4X C38 H41 SING N N 84 F4X C38 H42 SING N N 85 F4X O41 H43 SING N N 86 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor F4X InChI InChI 1.03 "InChI=1S/C32H41NO8/c1-32(2)23-10-7-8-11-24(23)33(19-9-5-3-4-6-12-27(35)36)26(32)18-15-21-13-16-22(17-14-21)40-31-30(39)29(38)28(37)25(20-34)41-31/h7-8,10-11,13-18,25,28-31,34,37-39H,3-6,9,12,19-20H2,1-2H3/p+1/b18-15+/t25-,28+,29+,30-,31-/m1/s1" F4X InChIKey InChI 1.03 XYRPYNRUMDVKEZ-ZUPFTECCSA-O F4X SMILES_CANONICAL CACTVS 3.385 "CC1(C)c2ccccc2[N+](=C1\C=C\c3ccc(O[C@@H]4O[C@H](CO)[C@H](O)[C@H](O)[C@H]4O)cc3)CCCCCCCC(O)=O" F4X SMILES CACTVS 3.385 "CC1(C)c2ccccc2[N+](=C1C=Cc3ccc(O[CH]4O[CH](CO)[CH](O)[CH](O)[CH]4O)cc3)CCCCCCCC(O)=O" F4X SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1(c2ccccc2[N+](=C1/C=C/c3ccc(cc3)O[C@H]4[C@@H]([C@H]([C@H]([C@H](O4)CO)O)O)O)CCCCCCCC(=O)O)C" F4X SMILES "OpenEye OEToolkits" 2.0.7 "CC1(c2ccccc2[N+](=C1C=Cc3ccc(cc3)OC4C(C(C(C(O4)CO)O)O)O)CCCCCCCC(=O)O)C" # _pdbx_chem_comp_identifier.comp_id F4X _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "8-[2-[(~{E})-2-[4-[(2~{S},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxyphenyl]ethenyl]-3,3-dimethyl-indol-1-ium-1-yl]octanoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site F4X "Create component" 2020-03-31 PDBJ F4X "Initial release" 2021-03-03 RCSB ##