data_F6L # _chem_comp.id F6L _chem_comp.name "4-[[2-[(E)-2-[4-[(2S,3R,4S,5R,6R)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxyphenyl]ethenyl]-3,3-dimethyl-2H-indol-1-yl]methyl]benzoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C32 H34 N O8" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2020-04-02 _chem_comp.pdbx_modified_date 2021-02-26 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 560.614 _chem_comp.one_letter_code ? _chem_comp.three_letter_code F6L _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7BTK _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal F6L C15 C1 C 0 1 N N N 6.320 18.637 89.499 2.575 -1.540 -0.282 C15 F6L 1 F6L C16 C2 C 0 1 Y N N 6.498 20.832 90.195 4.754 -2.007 -0.403 C16 F6L 2 F6L C17 C3 C 0 1 Y N N 5.959 20.162 91.226 4.293 -2.983 0.488 C17 F6L 3 F6L C19 C4 C 0 1 Y N N 6.532 22.210 90.206 6.117 -1.986 -0.730 C19 F6L 4 F6L C21 C5 C 0 1 Y N N 5.486 22.455 92.303 6.499 -3.872 0.701 C21 F6L 5 F6L C22 C6 C 0 1 Y N N 5.386 20.932 92.421 5.153 -3.903 1.033 C22 F6L 6 F6L C23 C7 C 0 1 N N N 4.763 17.848 91.474 2.450 -2.388 2.071 C23 F6L 7 F6L C24 C8 C 0 1 N N N 7.271 18.152 91.808 2.010 -3.944 0.141 C24 F6L 8 F6L C25 C9 C 0 1 N N N 7.911 20.061 88.073 3.889 -0.101 -1.742 C25 F6L 9 F6L C26 C10 C 0 1 Y N N 9.216 20.835 88.251 4.737 0.969 -1.104 C26 F6L 10 F6L C18 C11 C 0 1 N N N 6.028 18.642 91.025 2.809 -2.732 0.624 C18 F6L 11 F6L C20 C12 C 0 1 Y N N 6.048 22.995 91.215 6.973 -2.914 -0.178 C20 F6L 12 F6L C01 C13 C 0 1 Y N N 5.576 15.341 87.732 -1.036 -0.585 -0.033 C01 F6L 13 F6L N01 N1 N 1 1 N N N 6.953 19.886 89.233 3.723 -1.215 -0.806 N01 F6L 14 F6L O01 O1 O 0 1 N N N 5.078 12.601 84.877 -4.585 1.480 -0.479 O01 F6L 15 F6L C02 C14 C 0 1 Y N N 6.142 15.522 86.440 -1.090 0.551 -0.849 C02 F6L 16 F6L O02 O2 O 0 1 N N N 3.427 10.871 85.408 -6.069 -0.310 -0.282 O02 F6L 17 F6L C03 C15 C 0 1 Y N N 5.936 14.533 85.509 -2.276 1.236 -0.994 C03 F6L 18 F6L O03 O3 O 0 1 N N N 3.772 9.857 87.756 -8.742 0.060 -1.192 O03 F6L 19 F6L C04 C16 C 0 1 Y N N 5.186 13.432 85.911 -3.418 0.801 -0.333 C04 F6L 20 F6L O04 O4 O 0 1 N N N 6.223 9.583 87.428 -9.256 2.212 0.524 O04 F6L 21 F6L C05 C17 C 0 1 Y N N 4.608 13.229 87.185 -3.370 -0.327 0.479 C05 F6L 22 F6L O05 O5 O 0 1 N N N 6.870 10.213 84.103 -6.576 3.209 0.604 O05 F6L 23 F6L C06 C18 C 0 1 Y N N 4.825 14.215 88.120 -2.190 -1.019 0.631 C06 F6L 24 F6L O06 O6 O 0 1 N N N 0.685 9.014 85.286 -6.334 -3.154 0.039 O06 F6L 25 F6L C07 C19 C 0 1 N N R 4.130 9.134 86.579 -8.422 -0.036 0.198 C07 F6L 26 F6L O07 O7 O 0 1 N N N 13.085 23.737 89.830 8.442 4.053 0.422 O07 F6L 27 F6L C08 C20 C 0 1 N N S 5.591 9.339 86.210 -8.130 1.362 0.753 C08 F6L 28 F6L O08 O8 O 0 1 N N N 13.845 22.965 87.893 6.619 4.789 1.452 O08 F6L 29 F6L C09 C21 C 0 1 N N R 6.015 10.486 85.283 -6.901 1.936 0.043 C09 F6L 30 F6L C10 C22 C 0 1 N N S 4.746 11.220 84.879 -5.720 0.979 0.228 C10 F6L 31 F6L C11 C23 C 0 1 N N R 3.160 9.483 85.548 -7.183 -0.917 0.377 C11 F6L 32 F6L C12 C24 C 0 1 N N N 1.785 9.160 86.150 -7.445 -2.296 -0.230 C12 F6L 33 F6L C13 C25 C 0 1 N N N 5.802 16.374 88.751 0.225 -1.324 0.121 C13 F6L 34 F6L C14 C26 C 0 1 N N N 5.981 17.713 88.548 1.338 -0.902 -0.521 C14 F6L 35 F6L C27 C27 C 0 1 Y N N 9.861 21.391 87.125 4.158 1.882 -0.239 C27 F6L 36 F6L C28 C28 C 0 1 Y N N 11.071 22.110 87.306 4.928 2.864 0.348 C28 F6L 37 F6L C29 C29 C 0 1 Y N N 11.665 22.289 88.599 6.294 2.937 0.069 C29 F6L 38 F6L C30 C30 C 0 1 Y N N 10.998 21.717 89.719 6.872 2.013 -0.804 C30 F6L 39 F6L C31 C31 C 0 1 Y N N 9.794 20.999 89.545 6.091 1.032 -1.381 C31 F6L 40 F6L C32 C32 C 0 1 N N N 12.972 23.062 88.794 7.125 3.986 0.693 C32 F6L 41 F6L H2 H2 H 0 1 N N N 6.974 22.706 89.354 6.497 -1.243 -1.416 H2 F6L 42 F6L H3 H3 H 0 1 N N N 5.106 23.088 93.091 7.177 -4.596 1.129 H3 F6L 43 F6L H4 H4 H 0 1 N N N 4.947 20.440 93.277 4.782 -4.650 1.719 H4 F6L 44 F6L H5 H5 H 0 1 N N N 4.654 17.919 92.566 1.399 -2.104 2.127 H5 F6L 45 F6L H6 H6 H 0 1 N N N 3.872 18.273 90.988 2.625 -3.258 2.705 H6 F6L 46 F6L H7 H7 H 0 1 N N N 4.871 16.792 91.184 3.069 -1.559 2.412 H7 F6L 47 F6L H8 H8 H 0 1 N N N 7.052 18.160 92.886 2.321 -4.204 -0.871 H8 F6L 48 F6L H9 H9 H 0 1 N N N 7.523 17.129 91.493 2.192 -4.788 0.805 H9 F6L 49 F6L H10 H10 H 0 1 N N N 8.121 18.819 91.601 0.947 -3.702 0.143 H10 F6L 50 F6L H11 H11 H 0 1 N N N 7.350 20.570 87.276 2.912 0.311 -1.993 H11 F6L 51 F6L H12 H12 H 0 1 N N N 8.188 19.050 87.739 4.377 -0.458 -2.649 H12 F6L 52 F6L H13 H13 H 0 1 N N N 6.120 24.069 91.133 8.022 -2.895 -0.433 H13 F6L 53 F6L H14 H14 H 0 1 N N N 6.714 16.406 86.199 -0.203 0.890 -1.362 H14 F6L 54 F6L H15 H15 H 0 1 N N N 6.338 14.607 84.509 -2.318 2.113 -1.622 H15 F6L 55 F6L H16 H16 H 0 1 N N N 4.385 9.653 88.452 -9.517 0.607 -1.380 H16 F6L 56 F6L H17 H17 H 0 1 N N N 5.995 8.899 88.046 -9.140 3.114 0.851 H17 F6L 57 F6L H18 H18 H 0 1 N N N 4.027 12.347 87.412 -4.261 -0.661 0.991 H18 F6L 58 F6L H19 H19 H 0 1 N N N 7.655 9.755 84.379 -5.805 3.632 0.200 H19 F6L 59 F6L H20 H20 H 0 1 N N N 4.431 14.128 89.122 -2.155 -1.898 1.258 H20 F6L 60 F6L H21 H21 H 0 1 N N N -0.093 8.817 85.794 -6.432 -4.048 -0.318 H21 F6L 61 F6L H22 H22 H 0 1 N N N 4.008 8.062 86.794 -9.262 -0.475 0.735 H22 F6L 62 F6L H23 H23 H 0 1 N N N 13.931 24.168 89.837 8.944 4.757 0.854 H23 F6L 63 F6L H24 H24 H 0 1 N N N 5.968 8.400 85.778 -7.936 1.295 1.824 H24 F6L 64 F6L H25 H25 H 0 1 N N N 6.579 11.187 85.916 -7.115 2.050 -1.020 H25 F6L 65 F6L H26 H26 H 0 1 N N N 4.658 10.976 83.810 -5.481 0.897 1.289 H26 F6L 66 F6L H27 H27 H 0 1 N N N 3.324 8.921 84.616 -6.963 -1.023 1.439 H27 F6L 67 F6L H28 H28 H 0 1 N N N 1.540 9.972 86.851 -7.577 -2.200 -1.307 H28 F6L 68 F6L H29 H29 H 0 1 N N N 1.888 8.216 86.704 -8.347 -2.721 0.211 H29 F6L 69 F6L H30 H30 H 0 1 N N N 5.830 16.037 89.777 0.263 -2.203 0.747 H30 F6L 70 F6L H31 H31 H 0 1 N N N 5.842 18.077 87.541 1.281 -0.078 -1.217 H31 F6L 71 F6L H32 H32 H 0 1 N N N 9.439 21.271 86.138 3.101 1.825 -0.024 H32 F6L 72 F6L H33 H33 H 0 1 N N N 11.560 22.536 86.442 4.475 3.576 1.022 H33 F6L 73 F6L H34 H34 H 0 1 N N N 11.415 21.833 90.708 7.927 2.063 -1.025 H34 F6L 74 F6L H35 H35 H 0 1 N N N 9.303 20.567 90.405 6.537 0.314 -2.053 H35 F6L 75 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal F6L O05 C09 SING N N 1 F6L O01 C10 SING N N 2 F6L O01 C04 SING N N 3 F6L C10 C09 SING N N 4 F6L C10 O02 SING N N 5 F6L C09 C08 SING N N 6 F6L O06 C12 SING N N 7 F6L O02 C11 SING N N 8 F6L C03 C04 DOUB Y N 9 F6L C03 C02 SING Y N 10 F6L C11 C12 SING N N 11 F6L C11 C07 SING N N 12 F6L C04 C05 SING Y N 13 F6L C08 C07 SING N N 14 F6L C08 O04 SING N N 15 F6L C02 C01 DOUB Y N 16 F6L C07 O03 SING N N 17 F6L C27 C28 DOUB Y N 18 F6L C27 C26 SING Y N 19 F6L C05 C06 DOUB Y N 20 F6L C28 C29 SING Y N 21 F6L C01 C06 SING Y N 22 F6L C01 C13 SING N N 23 F6L O08 C32 DOUB N N 24 F6L C25 C26 SING N N 25 F6L C25 N01 SING N N 26 F6L C26 C31 DOUB Y N 27 F6L C14 C13 DOUB N E 28 F6L C14 C15 SING N N 29 F6L C29 C32 SING N N 30 F6L C29 C30 DOUB Y N 31 F6L C32 O07 SING N N 32 F6L N01 C15 DOUB N N 33 F6L N01 C16 SING N N 34 F6L C15 C18 SING N N 35 F6L C31 C30 SING Y N 36 F6L C16 C19 DOUB Y N 37 F6L C16 C17 SING Y N 38 F6L C19 C20 SING Y N 39 F6L C18 C17 SING N N 40 F6L C18 C23 SING N N 41 F6L C18 C24 SING N N 42 F6L C20 C21 DOUB Y N 43 F6L C17 C22 DOUB Y N 44 F6L C21 C22 SING Y N 45 F6L C19 H2 SING N N 46 F6L C21 H3 SING N N 47 F6L C22 H4 SING N N 48 F6L C23 H5 SING N N 49 F6L C23 H6 SING N N 50 F6L C23 H7 SING N N 51 F6L C24 H8 SING N N 52 F6L C24 H9 SING N N 53 F6L C24 H10 SING N N 54 F6L C25 H11 SING N N 55 F6L C25 H12 SING N N 56 F6L C20 H13 SING N N 57 F6L C02 H14 SING N N 58 F6L C03 H15 SING N N 59 F6L O03 H16 SING N N 60 F6L O04 H17 SING N N 61 F6L C05 H18 SING N N 62 F6L O05 H19 SING N N 63 F6L C06 H20 SING N N 64 F6L O06 H21 SING N N 65 F6L C07 H22 SING N N 66 F6L O07 H23 SING N N 67 F6L C08 H24 SING N N 68 F6L C09 H25 SING N N 69 F6L C10 H26 SING N N 70 F6L C11 H27 SING N N 71 F6L C12 H28 SING N N 72 F6L C12 H29 SING N N 73 F6L C13 H30 SING N N 74 F6L C14 H31 SING N N 75 F6L C27 H32 SING N N 76 F6L C28 H33 SING N N 77 F6L C30 H34 SING N N 78 F6L C31 H35 SING N N 79 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor F6L InChI InChI 1.03 "InChI=1S/C32H33NO8/c1-32(2)23-5-3-4-6-24(23)33(17-20-7-12-21(13-8-20)30(38)39)26(32)16-11-19-9-14-22(15-10-19)40-31-29(37)28(36)27(35)25(18-34)41-31/h3-16,25,27-29,31,34-37H,17-18H2,1-2H3/p+1/b16-11+/t25-,27+,28+,29-,31-/m1/s1" F6L InChIKey InChI 1.03 ZRXNUVMWWIBYNP-BARJCIPKSA-O F6L SMILES_CANONICAL CACTVS 3.385 "CC1(C)c2ccccc2[N+](=C1\C=C\c3ccc(O[C@@H]4O[C@H](CO)[C@H](O)[C@H](O)[C@H]4O)cc3)Cc5ccc(cc5)C(O)=O" F6L SMILES CACTVS 3.385 "CC1(C)c2ccccc2[N+](=C1C=Cc3ccc(O[CH]4O[CH](CO)[CH](O)[CH](O)[CH]4O)cc3)Cc5ccc(cc5)C(O)=O" F6L SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1(c2ccccc2[N+](=C1/C=C/c3ccc(cc3)O[C@H]4[C@@H]([C@H]([C@H]([C@H](O4)CO)O)O)O)Cc5ccc(cc5)C(=O)O)C" F6L SMILES "OpenEye OEToolkits" 2.0.7 "CC1(c2ccccc2[N+](=C1C=Cc3ccc(cc3)OC4C(C(C(C(O4)CO)O)O)O)Cc5ccc(cc5)C(=O)O)C" # _pdbx_chem_comp_identifier.comp_id F6L _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4-[[2-[(~{E})-2-[4-[(2~{S},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxyphenyl]ethenyl]-3,3-dimethyl-indol-1-ium-1-yl]methyl]benzoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site F6L "Create component" 2020-04-02 PDBJ F6L "Initial release" 2021-03-03 RCSB ##