data_FA2 # _chem_comp.id FA2 _chem_comp.name "5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXYTETRAHYDROFURAN-3-YL DIHYDROGEN PHOSPHATE" _chem_comp.type "RNA LINKING" _chem_comp.pdbx_type ATOMN _chem_comp.formula "C9 H12 N5 O6 P" _chem_comp.mon_nstd_parent_comp_id DA _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2003-07-09 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 317.195 _chem_comp.one_letter_code A _chem_comp.three_letter_code FA2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1PWF _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal FA2 P P P 0 1 N N N 10.157 31.459 8.180 -0.689 2.134 2.086 P FA2 1 FA2 OP1 O1P O 0 1 N N N 10.671 32.783 7.760 -0.261 2.504 0.695 OP1 FA2 2 FA2 OP2 O2P O 0 1 N N N 11.038 30.289 8.180 -0.632 3.334 3.168 OP2 FA2 3 FA2 "O3'" O3* O 0 1 N N N 9.485 31.553 9.567 0.169 0.952 2.776 "O3'" FA2 4 FA2 N9 N9 N 0 1 Y N N 6.920 30.647 11.823 2.831 -2.791 1.781 N9 FA2 5 FA2 C4 C4 C 0 1 Y N N 5.970 30.147 12.687 3.201 -3.964 2.374 C4 FA2 6 FA2 N3 N3 N 0 1 Y N N 4.973 30.842 13.324 2.413 -4.844 3.010 N3 FA2 7 FA2 C2 C2 C 0 1 Y N N 4.266 30.048 14.075 3.142 -5.886 3.466 C2 FA2 8 FA2 N1 N1 N 0 1 Y N N 4.370 28.727 14.288 4.474 -6.107 3.351 N1 FA2 9 FA2 C6 C6 C 0 1 Y N N 5.362 28.083 13.646 5.208 -5.176 2.696 C6 FA2 10 FA2 N6 N6 N 0 1 N N N 5.463 26.772 13.855 6.595 -5.348 2.544 N6 FA2 11 FA2 C5 C5 C 0 1 Y N N 6.209 28.799 12.804 4.571 -4.053 2.178 C5 FA2 12 FA2 N7 N7 N 0 1 Y N N 7.294 28.443 12.015 5.034 -2.964 1.484 N7 FA2 13 FA2 C8 C8 C 0 1 Y N N 7.680 29.587 11.451 3.966 -2.227 1.261 C8 FA2 14 FA2 "C2'" C2* C 0 1 N N R 8.583 32.466 11.559 1.165 -1.250 2.827 "C2'" FA2 15 FA2 "C4'" C4* C 0 1 N N N 7.651 33.185 9.510 0.765 -0.236 0.746 "C4'" FA2 16 FA2 "O4'" O4* O 0 1 N N N 6.687 32.326 10.126 1.330 -1.523 0.464 "O4'" FA2 17 FA2 "C1'" C1* C 0 1 N N R 7.096 32.025 11.377 1.483 -2.233 1.708 "C1'" FA2 18 FA2 "C3'" C3* C 0 1 N N S 8.963 32.786 10.117 0.194 -0.313 2.145 "C3'" FA2 19 FA2 "O2'" O2* O 0 1 N N N 8.665 33.629 12.360 0.563 -1.915 3.925 "O2'" FA2 20 FA2 OP3 O3P O 0 1 N Y N ? ? ? -2.207 1.592 2.212 OP3 FA2 21 FA2 HOP2 2HOP H 0 0 N N N 10.708 29.439 8.449 -1.036 4.198 2.941 HOP2 FA2 22 FA2 H2 H2 H 0 1 N N N 3.577 30.464 14.540 2.585 -6.652 3.995 H2 FA2 23 FA2 H6A H6A H 0 1 N N N 4.909 26.376 14.380 7.221 -4.887 3.176 H6A FA2 24 FA2 H6B H6B H 0 1 N N N 6.083 26.321 13.465 6.944 -5.852 1.751 H6B FA2 25 FA2 H8 H8 H 0 1 N N N 8.397 29.652 10.863 3.952 -1.283 0.733 H8 FA2 26 FA2 "H2'" H2* H 0 1 N N N 9.132 31.740 11.923 2.052 -0.720 3.191 "H2'" FA2 27 FA2 "H4'1" 1H4* H 0 0 N N N 7.453 34.116 9.699 0.001 0.001 -0.000 "H4'1" FA2 28 FA2 "H4'2" 2H4* H 0 0 N N N 7.663 33.056 8.549 1.556 0.518 0.665 "H4'2" FA2 29 FA2 "H1'" H1* H 0 1 N N N 6.565 32.583 11.984 0.811 -3.098 1.702 "H1'" FA2 30 FA2 "H3'" H3* H 0 1 N N N 9.620 33.512 10.068 -0.822 -0.724 2.144 "H3'" FA2 31 FA2 "HO2'" 2HO* H 0 0 N N N 9.569 33.897 12.470 0.539 -2.857 3.697 "HO2'" FA2 32 FA2 HOP3 3HOP H 0 0 N N N -0.329 -0.849 0.269 -2.929 2.095 1.778 HOP3 FA2 33 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal FA2 P OP1 DOUB N N 1 FA2 P OP2 SING N N 2 FA2 P "O3'" SING N N 3 FA2 P OP3 SING N N 4 FA2 OP2 HOP2 SING N N 5 FA2 "O3'" "C3'" SING N N 6 FA2 N9 C4 SING Y N 7 FA2 N9 C8 SING Y N 8 FA2 N9 "C1'" SING N N 9 FA2 C4 N3 SING Y N 10 FA2 C4 C5 DOUB Y N 11 FA2 N3 C2 DOUB Y N 12 FA2 C2 N1 SING Y N 13 FA2 C2 H2 SING N N 14 FA2 N1 C6 DOUB Y N 15 FA2 C6 N6 SING N N 16 FA2 C6 C5 SING Y N 17 FA2 N6 H6A SING N N 18 FA2 N6 H6B SING N N 19 FA2 C5 N7 SING Y N 20 FA2 N7 C8 DOUB Y N 21 FA2 C8 H8 SING N N 22 FA2 "C2'" "C1'" SING N N 23 FA2 "C2'" "C3'" SING N N 24 FA2 "C2'" "O2'" SING N N 25 FA2 "C2'" "H2'" SING N N 26 FA2 "C4'" "O4'" SING N N 27 FA2 "C4'" "C3'" SING N N 28 FA2 "C4'" "H4'1" SING N N 29 FA2 "C4'" "H4'2" SING N N 30 FA2 "O4'" "C1'" SING N N 31 FA2 "C1'" "H1'" SING N N 32 FA2 "C3'" "H3'" SING N N 33 FA2 "O2'" "HO2'" SING N N 34 FA2 OP3 HOP3 SING N N 35 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor FA2 SMILES ACDLabs 10.04 "O=P(O)(O)OC3COC(n2cnc1c(ncnc12)N)C3O" FA2 SMILES_CANONICAL CACTVS 3.341 "Nc1ncnc2n(cnc12)[C@@H]3OC[C@H](O[P](O)(O)=O)[C@H]3O" FA2 SMILES CACTVS 3.341 "Nc1ncnc2n(cnc12)[CH]3OC[CH](O[P](O)(O)=O)[CH]3O" FA2 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@H](CO3)OP(=O)(O)O)O)N" FA2 SMILES "OpenEye OEToolkits" 1.5.0 "c1nc(c2c(n1)n(cn2)C3C(C(CO3)OP(=O)(O)O)O)N" FA2 InChI InChI 1.03 "InChI=1S/C9H12N5O6P/c10-7-5-8(12-2-11-7)14(3-13-5)9-6(15)4(1-19-9)20-21(16,17)18/h2-4,6,9,15H,1H2,(H2,10,11,12)(H2,16,17,18)/t4-,6+,9+/m0/s1" FA2 InChIKey InChI 1.03 IJEJRDCFMFEDGL-AFEQZKEHSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FA2 "SYSTEMATIC NAME" ACDLabs 10.04 "(3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxytetrahydrofuran-3-yl dihydrogen phosphate" FA2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(3S,4R,5R)-5-(6-aminopurin-9-yl)-4-hydroxy-oxolan-3-yl] dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site FA2 "Create component" 2003-07-09 RCSB FA2 "Modify linking type" 2011-06-04 RCSB FA2 "Modify descriptor" 2011-06-04 RCSB #