data_FDE # _chem_comp.id FDE _chem_comp.name "FE(III) DEUTEROPORPHYRIN IX" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C30 H28 Fe N4 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2005-09-13 _chem_comp.pdbx_modified_date 2023-09-23 _chem_comp.pdbx_ambiguous_flag Y _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 564.413 _chem_comp.one_letter_code ? _chem_comp.three_letter_code FDE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag Y _chem_comp.pdbx_model_coordinates_db_code 2AT4 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal FDE CHA CHA C 0 1 N N N 11.568 22.937 34.958 ? ? ? CHA FDE 1 FDE C1A C1A C 0 1 N N N 10.255 22.605 35.117 ? ? ? C1A FDE 2 FDE C2A C2A C 0 1 N N N 9.161 23.460 34.777 ? ? ? C2A FDE 3 FDE CAA CAA C 0 1 N N N 9.244 24.876 34.214 ? ? ? CAA FDE 4 FDE CBA CBA C 0 1 N N N 8.791 25.896 35.255 ? ? ? CBA FDE 5 FDE CGA CGA C 0 1 N N N 8.894 27.327 34.808 ? ? ? CGA FDE 6 FDE O1A O1A O 0 1 N N N 9.643 27.676 33.870 ? ? ? O1A FDE 7 FDE O2A O2A O 0 1 N N N 8.156 28.137 35.368 ? ? ? O2A FDE 8 FDE C3A C3A C 0 1 N N N 8.072 22.773 35.034 ? ? ? C3A FDE 9 FDE CMA CMA C 0 1 N N N 6.656 23.245 34.819 ? ? ? CMA FDE 10 FDE C4A C4A C 0 1 N N N 8.456 21.489 35.560 ? ? ? C4A FDE 11 FDE NA "N A" N 0 1 N N N 9.818 21.399 35.598 ? ? ? NA FDE 12 FDE CHB CHB C 0 1 N N N 7.607 20.486 35.949 ? ? ? CHB FDE 13 FDE C1B C1B C 0 1 Y N N 7.982 19.365 36.689 ? ? ? C1B FDE 14 FDE C2B C2B C 0 1 Y N N 7.076 18.390 37.265 ? ? ? C2B FDE 15 FDE C3B C3B C 0 1 Y N N 7.804 17.519 37.957 ? ? ? C3B FDE 16 FDE CME CME C 0 1 N N N 7.189 16.354 38.757 ? ? ? CME FDE 17 FDE C4B C4B C 0 1 Y N N 9.191 17.902 37.830 ? ? ? C4B FDE 18 FDE NB "N B" N 0 1 Y N N 9.273 19.038 37.047 ? ? ? NB FDE 19 FDE CHC CHC C 0 1 N N N 10.288 17.278 38.390 ? ? ? CHC FDE 20 FDE C1C C1C C 0 1 N N N 11.619 17.563 38.124 ? ? ? C1C FDE 21 FDE C2C C2C C 0 1 N N N 12.806 16.843 38.559 ? ? ? C2C FDE 22 FDE C3C C3C C 0 1 N N N 13.860 17.410 38.074 ? ? ? C3C FDE 23 FDE CMF CMF C 0 1 N N N 15.257 16.888 38.327 ? ? ? CMF FDE 24 FDE C4C C4C C 0 1 N N N 13.436 18.509 37.284 ? ? ? C4C FDE 25 FDE NC "N C" N 0 1 N N N 12.061 18.598 37.343 ? ? ? NC FDE 26 FDE CHD CHD C 0 1 N N N 14.250 19.350 36.646 ? ? ? CHD FDE 27 FDE C1D C1D C 0 1 N N N 13.881 20.480 36.027 ? ? ? C1D FDE 28 FDE C2D C2D C 0 1 N N N 14.818 21.398 35.461 ? ? ? C2D FDE 29 FDE CMD CMD C 0 1 N N N 16.340 21.279 35.419 ? ? ? CMD FDE 30 FDE C3D C3D C 0 1 N N N 14.003 22.502 34.941 ? ? ? C3D FDE 31 FDE CAD CAD C 0 1 N N N 14.516 23.740 34.248 ? ? ? CAD FDE 32 FDE CBD CBD C 0 1 N N N 14.122 23.678 32.776 ? ? ? CBD FDE 33 FDE CGD CGD C 0 1 N N N 14.610 24.836 31.937 ? ? ? CGD FDE 34 FDE O1D O1D O 0 1 N N N 15.629 24.672 31.193 ? ? ? O1D FDE 35 FDE O2D O2D O 0 1 N N N 13.974 25.924 31.958 ? ? ? O2D FDE 36 FDE C4D C4D C 0 1 N N N 12.638 22.139 35.231 ? ? ? C4D FDE 37 FDE ND "N D" N 0 1 N N R 12.585 20.916 35.876 ? ? ? ND FDE 38 FDE FE FE FE 0 0 N N N 10.907 19.997 36.498 ? ? ? FE FDE 39 FDE HHA HHA H 0 1 N N N 11.780 23.926 34.580 ? ? ? HHA FDE 40 FDE HAA1 HAA1 H 0 0 N N N 10.284 25.090 33.927 ? ? ? HAA1 FDE 41 FDE HAA2 HAA2 H 0 0 N N N 8.596 24.951 33.328 ? ? ? HAA2 FDE 42 FDE HBA1 HBA1 H 0 0 N N N 7.740 25.689 35.505 ? ? ? HBA1 FDE 43 FDE HBA2 HBA2 H 0 0 N N N 9.414 25.771 36.153 ? ? ? HBA2 FDE 44 FDE H1A H1A H 0 1 N N N 9.530 28.604 33.702 ? ? ? H1A FDE 45 FDE HMA1 HMA1 H 0 0 N N N 5.955 22.454 35.125 ? ? ? HMA1 FDE 46 FDE HMA2 HMA2 H 0 0 N N N 6.475 24.148 35.421 ? ? ? HMA2 FDE 47 FDE HMA3 HMA3 H 0 0 N N N 6.505 23.478 33.755 ? ? ? HMA3 FDE 48 FDE HHB HHB H 0 1 N N N 6.570 20.570 35.661 ? ? ? HHB FDE 49 FDE H2B H2B H 0 1 N N N 6.002 18.374 37.152 ? ? ? H2B FDE 50 FDE HME1 HME1 H 0 0 N N N 7.121 15.463 38.115 ? ? ? HME1 FDE 51 FDE HME2 HME2 H 0 0 N N N 7.824 16.132 39.627 ? ? ? HME2 FDE 52 FDE HME3 HME3 H 0 0 N N N 6.183 16.636 39.100 ? ? ? HME3 FDE 53 FDE HHC HHC H 0 1 N N N 10.091 16.492 39.104 ? ? ? HHC FDE 54 FDE H2C H2C H 0 1 N N N 12.806 15.967 39.191 ? ? ? H2C FDE 55 FDE HMF1 HMF1 H 0 0 N N N 15.988 17.531 37.815 ? ? ? HMF1 FDE 56 FDE HMF2 HMF2 H 0 0 N N N 15.460 16.892 39.408 ? ? ? HMF2 FDE 57 FDE HMF3 HMF3 H 0 0 N N N 15.340 15.861 37.942 ? ? ? HMF3 FDE 58 FDE HHD HHD H 0 1 N N N 15.300 19.098 36.626 ? ? ? HHD FDE 59 FDE HMD1 HMD1 H 0 0 N N N 16.763 22.158 34.910 ? ? ? HMD1 FDE 60 FDE HMD2 HMD2 H 0 0 N N N 16.732 21.225 36.445 ? ? ? HMD2 FDE 61 FDE HMD3 HMD3 H 0 0 N N N 16.621 20.368 34.871 ? ? ? HMD3 FDE 62 FDE HAD1 HAD1 H 0 0 N N N 14.073 24.634 34.712 ? ? ? HAD1 FDE 63 FDE HAD2 HAD2 H 0 0 N N N 15.612 23.786 34.336 ? ? ? HAD2 FDE 64 FDE HBD1 HBD1 H 0 0 N N N 14.534 22.751 32.351 ? ? ? HBD1 FDE 65 FDE HBD2 HBD2 H 0 0 N N N 13.024 23.652 32.717 ? ? ? HBD2 FDE 66 FDE H1D H1D H 0 1 N N N 15.795 25.468 30.702 ? ? ? H1D FDE 67 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal FDE CHA C1A SING N N 1 FDE CHA C4D DOUB N N 2 FDE CHA HHA SING N N 3 FDE C1A C2A SING N N 4 FDE C1A NA DOUB N N 5 FDE C2A CAA SING N N 6 FDE C2A C3A DOUB N N 7 FDE CAA CBA SING N N 8 FDE CAA HAA1 SING N N 9 FDE CAA HAA2 SING N N 10 FDE CBA CGA SING N N 11 FDE CBA HBA1 SING N N 12 FDE CBA HBA2 SING N N 13 FDE CGA O1A SING N N 14 FDE CGA O2A DOUB N N 15 FDE O1A H1A SING N N 16 FDE C3A CMA SING N N 17 FDE C3A C4A SING N N 18 FDE CMA HMA1 SING N N 19 FDE CMA HMA2 SING N N 20 FDE CMA HMA3 SING N N 21 FDE C4A NA SING N N 22 FDE C4A CHB DOUB N N 23 FDE NA FE SING N N 24 FDE CHB C1B SING N N 25 FDE CHB HHB SING N N 26 FDE C1B C2B DOUB Y N 27 FDE C1B NB SING Y N 28 FDE C2B C3B SING Y N 29 FDE C2B H2B SING N N 30 FDE C3B CME SING N N 31 FDE C3B C4B DOUB Y N 32 FDE CME HME1 SING N N 33 FDE CME HME2 SING N N 34 FDE CME HME3 SING N N 35 FDE C4B NB SING Y N 36 FDE C4B CHC SING N N 37 FDE NB FE SING N N 38 FDE CHC C1C DOUB N N 39 FDE CHC HHC SING N N 40 FDE C1C C2C SING N N 41 FDE C1C NC SING N N 42 FDE C2C C3C DOUB N N 43 FDE C2C H2C SING N N 44 FDE C3C CMF SING N N 45 FDE C3C C4C SING N N 46 FDE CMF HMF1 SING N N 47 FDE CMF HMF2 SING N N 48 FDE CMF HMF3 SING N N 49 FDE C4C NC DOUB N N 50 FDE C4C CHD SING N N 51 FDE NC FE SING N N 52 FDE CHD C1D DOUB N N 53 FDE CHD HHD SING N N 54 FDE C1D C2D SING N N 55 FDE C1D ND SING N N 56 FDE C2D CMD SING N N 57 FDE C2D C3D DOUB N N 58 FDE CMD HMD1 SING N N 59 FDE CMD HMD2 SING N N 60 FDE CMD HMD3 SING N N 61 FDE C3D CAD SING N N 62 FDE C3D C4D SING N N 63 FDE CAD CBD SING N N 64 FDE CAD HAD1 SING N N 65 FDE CAD HAD2 SING N N 66 FDE CBD CGD SING N N 67 FDE CBD HBD1 SING N N 68 FDE CBD HBD2 SING N N 69 FDE CGD O1D SING N N 70 FDE CGD O2D DOUB N N 71 FDE O1D H1D SING N N 72 FDE C4D ND SING N N 73 FDE ND FE SING N N 74 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor FDE InChI InChI 1.06 "InChI=1S/C30H30N4O4.Fe/c1-15-9-20-12-25-17(3)21(5-7-29(35)36)27(33-25)14-28-22(6-8-30(37)38)18(4)26(34-28)13-24-16(2)10-19(32-24)11-23(15)31-20;/h9-14H,5-8H2,1-4H3,(H4,31,32,33,34,35,36,37,38);/q;+2/p-2/b19-11-,20-12-,23-11-,24-13-,25-12-,26-13-,27-14-,28-14-;" FDE InChIKey InChI 1.06 QQYZTXBVPVYDJC-RWRCOHKGSA-L FDE SMILES_CANONICAL CACTVS 3.385 "CC1=CC2=Cc3n4[Fe][N@@]5C(=CC1=N2)C(=C(CCC(O)=O)C5=CC6=NC(=Cc4cc3C)C(=C6CCC(O)=O)C)C" FDE SMILES CACTVS 3.385 "CC1=CC2=Cc3n4[Fe][N]5C(=CC1=N2)C(=C(CCC(O)=O)C5=CC6=NC(=Cc4cc3C)C(=C6CCC(O)=O)C)C" FDE SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc2n3c1C=C4C=C(C5=[N]4[Fe]36[N]7=C(C=C8N6C(=C5)C(=C8CCC(=O)O)C)C(=C(C7=C2)C)CCC(=O)O)C" FDE SMILES "OpenEye OEToolkits" 2.0.7 "Cc1cc2n3c1C=C4C=C(C5=[N]4[Fe]36[N]7=C(C=C8N6C(=C5)C(=C8CCC(=O)O)C)C(=C(C7=C2)C)CCC(=O)O)C" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site FDE "Create component" 2005-09-13 RCSB FDE "Modify descriptor" 2023-09-23 RCSB #