data_FSJ # _chem_comp.id FSJ _chem_comp.name "(1S,2S,3R,4S,6R)-4,6-diamino-3-{[(2S,3R)-3-amino-6-(fluoromethyl)-3,4-dihydro-2H-pyran-2-yl]oxy}-2-hydroxycyclohexyl 3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranoside" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H35 F N4 O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "6'-fluoro sisomicin" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-01-04 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 450.502 _chem_comp.one_letter_code ? _chem_comp.three_letter_code FSJ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5Z1H _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal FSJ C11 C1 C 0 1 N N S 16.283 -8.345 -2.447 -3.025 -0.716 -0.521 C11 FSJ 1 FSJ C12 C2 C 0 1 N N R 15.724 -11.914 -6.543 0.788 2.968 -0.453 C12 FSJ 2 FSJ C13 C3 C 0 1 N N R 12.192 -11.519 -6.620 2.558 0.221 1.195 C13 FSJ 3 FSJ C21 C4 C 0 1 N N R 16.563 -6.802 -2.752 -3.680 -1.783 -1.410 C21 FSJ 4 FSJ C22 C5 C 0 1 N N N 16.916 -12.293 -5.537 -0.659 3.463 -0.414 C22 FSJ 5 FSJ C23 C6 C 0 1 N N R 11.723 -11.568 -8.129 4.071 -0.012 1.204 C23 FSJ 6 FSJ C31 C7 C 0 1 N N N 18.171 -6.443 -2.719 -4.403 -2.784 -0.502 C31 FSJ 7 FSJ C32 C8 C 0 1 N N S 17.466 -10.942 -4.868 -1.548 2.503 -1.208 C32 FSJ 8 FSJ C33 C9 C 0 1 N N R 11.612 -10.051 -8.649 4.484 -0.683 -0.109 C33 FSJ 9 FSJ C41 C10 C 0 1 N N N 19.015 -7.425 -1.776 -5.213 -2.036 0.522 C41 FSJ 10 FSJ C42 C11 C 0 1 N N R 16.282 -10.232 -4.089 -1.469 1.105 -0.590 C42 FSJ 11 FSJ C43 C12 C 0 1 N N R 10.474 -9.277 -7.755 3.697 -1.987 -0.273 C43 FSJ 12 FSJ C51 C13 C 0 1 N N N 18.390 -8.443 -1.079 -5.006 -0.776 0.797 C51 FSJ 13 FSJ C52 C14 C 0 1 N N S 15.089 -9.879 -5.114 -0.022 0.611 -0.629 C52 FSJ 14 FSJ C53 C15 C 0 1 N N N 10.917 -9.283 -6.225 2.198 -1.678 -0.225 C53 FSJ 15 FSJ C61 C16 C 0 1 N N N 19.177 -9.416 -0.151 -5.868 -0.122 1.847 C61 FSJ 16 FSJ C62 C17 C 0 1 N N S 14.538 -11.218 -5.744 0.867 1.571 0.165 C62 FSJ 17 FSJ C83 C18 C 0 1 N N N 10.241 -7.774 -8.123 4.043 -2.628 -1.618 C83 FSJ 18 FSJ C93 C19 C 0 1 N N N 12.250 -9.804 -11.067 6.709 0.188 -0.502 C93 FSJ 19 FSJ N12 N1 N 0 1 N N N 15.251 -13.120 -7.130 1.641 3.890 0.309 N12 FSJ 20 FSJ N21 N2 N 0 1 N N N 15.922 -6.481 -4.055 -4.646 -1.148 -2.316 N21 FSJ 21 FSJ N32 N3 N 0 1 N N N 18.563 -11.270 -3.922 -2.937 2.977 -1.171 N32 FSJ 22 FSJ N33 N4 N 0 1 N N N 11.183 -10.035 -10.070 5.923 -0.979 -0.079 N33 FSJ 23 FSJ F61 F1 F 0 1 N N N 18.330 -10.351 0.434 -5.212 -0.166 3.082 F61 FSJ 24 FSJ O11 O1 O 0 1 N N N 16.820 -9.078 -3.542 -2.299 0.209 -1.332 O11 FSJ 25 FSJ O23 O2 O 0 1 N N N 12.696 -12.297 -8.867 4.746 1.241 1.334 O23 FSJ 26 FSJ O43 O3 O 0 1 N N N 9.193 -9.896 -7.858 4.034 -2.885 0.786 O43 FSJ 27 FSJ O51 O4 O 0 1 N N N 16.940 -8.676 -1.172 -4.059 -0.028 0.189 O51 FSJ 28 FSJ O52 O5 O 0 1 N N N 14.008 -9.245 -4.394 0.052 -0.694 -0.052 O52 FSJ 29 FSJ O53 O6 O 0 1 N N N 11.186 -10.734 -5.776 1.887 -1.027 1.008 O53 FSJ 30 FSJ O62 O7 O 0 1 N N N 13.507 -10.883 -6.629 2.218 1.109 0.129 O62 FSJ 31 FSJ H1 H1 H 0 1 N N N 15.196 -8.496 -2.366 -2.348 -1.194 0.188 H1 FSJ 32 FSJ H2 H2 H 0 1 N N N 16.105 -11.217 -7.304 1.130 2.928 -1.487 H2 FSJ 33 FSJ H3 H3 H 0 1 N N N 12.266 -12.548 -6.238 2.252 0.660 2.145 H3 FSJ 34 FSJ H4 H4 H 0 1 N N N 16.082 -6.211 -1.959 -2.915 -2.298 -1.990 H4 FSJ 35 FSJ H5 H5 H 0 1 N N N 16.540 -12.969 -4.754 -1.002 3.503 0.620 H5 FSJ 36 FSJ H6 H6 H 0 1 N N N 17.726 -12.789 -6.092 -0.715 4.458 -0.855 H6 FSJ 37 FSJ H7 H7 H 0 1 N N N 10.732 -12.041 -8.188 4.336 -0.657 2.042 H7 FSJ 38 FSJ H8 H8 H 0 1 N N N 18.567 -6.515 -3.743 -5.063 -3.408 -1.103 H8 FSJ 39 FSJ H9 H9 H 0 1 N N N 18.292 -5.414 -2.350 -3.669 -3.412 0.003 H9 FSJ 40 FSJ H10 H10 H 0 1 N N N 17.829 -10.273 -5.662 -1.205 2.462 -2.242 H10 FSJ 41 FSJ H11 H11 H 0 1 N N N 12.580 -9.545 -8.518 4.265 -0.017 -0.944 H11 FSJ 42 FSJ H12 H12 H 0 1 N N N 20.083 -7.291 -1.684 -5.996 -2.562 1.048 H12 FSJ 43 FSJ H13 H13 H 0 1 N N N 15.897 -10.915 -3.317 -1.812 1.146 0.444 H13 FSJ 44 FSJ H14 H14 H 0 1 N N N 15.478 -9.229 -5.911 0.320 0.571 -1.663 H14 FSJ 45 FSJ H15 H15 H 0 1 N N N 11.833 -8.686 -6.106 1.934 -1.025 -1.057 H15 FSJ 46 FSJ H16 H16 H 0 1 N N N 10.115 -8.851 -5.609 1.633 -2.607 -0.298 H16 FSJ 47 FSJ H17 H17 H 0 1 N N N 19.937 -9.944 -0.747 -6.053 0.915 1.570 H17 FSJ 48 FSJ H18 H18 H 0 1 N N N 19.671 -8.835 0.641 -6.817 -0.654 1.921 H18 FSJ 49 FSJ H19 H19 H 0 1 N N N 14.195 -11.888 -4.942 0.524 1.611 1.199 H19 FSJ 50 FSJ H20 H20 H 0 1 N N N 9.464 -7.352 -7.469 5.112 -2.842 -1.654 H20 FSJ 51 FSJ H21 H21 H 0 1 N N N 11.178 -7.214 -7.987 3.483 -3.556 -1.734 H21 FSJ 52 FSJ H22 H22 H 0 1 N N N 9.918 -7.699 -9.172 3.783 -1.943 -2.425 H22 FSJ 53 FSJ H23 H23 H 0 1 N N N 11.816 -9.813 -12.078 6.431 0.464 -1.519 H23 FSJ 54 FSJ H24 H24 H 0 1 N N N 12.722 -8.828 -10.880 6.510 1.023 0.169 H24 FSJ 55 FSJ H25 H25 H 0 1 N N N 13.006 -10.599 -10.985 7.771 -0.058 -0.471 H25 FSJ 56 FSJ H26 H26 H 0 1 N N N 15.995 -13.560 -7.633 1.606 4.820 -0.080 H26 FSJ 57 FSJ H27 H27 H 0 1 N N N 14.925 -13.735 -6.412 1.385 3.896 1.285 H27 FSJ 58 FSJ H29 H29 H 0 1 N N N 14.951 -6.719 -4.017 -5.104 -1.835 -2.896 H29 FSJ 59 FSJ H30 H30 H 0 1 N N N 16.019 -5.503 -4.242 -5.321 -0.602 -1.801 H30 FSJ 60 FSJ H32 H32 H 0 1 N N N 18.906 -10.429 -3.505 -3.016 3.899 -1.574 H32 FSJ 61 FSJ H33 H33 H 0 1 N N N 18.217 -11.879 -3.208 -3.554 2.327 -1.633 H33 FSJ 62 FSJ H35 H35 H 0 1 N N N 10.503 -9.310 -10.176 6.139 -1.785 -0.646 H35 FSJ 63 FSJ H37 H37 H 0 1 N N N 12.741 -13.188 -8.540 4.528 1.724 2.143 H37 FSJ 64 FSJ H38 H38 H 0 1 N N N 8.566 -9.418 -7.327 3.571 -3.733 0.745 H38 FSJ 65 FSJ H39 H39 H 0 1 N N N 14.318 -8.435 -4.006 -0.431 -1.371 -0.546 H39 FSJ 66 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal FSJ C93 N33 SING N N 1 FSJ N33 C33 SING N N 2 FSJ O23 C23 SING N N 3 FSJ C33 C23 SING N N 4 FSJ C33 C43 SING N N 5 FSJ C23 C13 SING N N 6 FSJ C83 C43 SING N N 7 FSJ O43 C43 SING N N 8 FSJ C43 C53 SING N N 9 FSJ N12 C12 SING N N 10 FSJ O62 C13 SING N N 11 FSJ O62 C62 SING N N 12 FSJ C13 O53 SING N N 13 FSJ C12 C62 SING N N 14 FSJ C12 C22 SING N N 15 FSJ C53 O53 SING N N 16 FSJ C62 C52 SING N N 17 FSJ C22 C32 SING N N 18 FSJ C52 O52 SING N N 19 FSJ C52 C42 SING N N 20 FSJ C32 C42 SING N N 21 FSJ C32 N32 SING N N 22 FSJ C42 O11 SING N N 23 FSJ N21 C21 SING N N 24 FSJ O11 C11 SING N N 25 FSJ C21 C31 SING N N 26 FSJ C21 C11 SING N N 27 FSJ C31 C41 SING N N 28 FSJ C11 O51 SING N N 29 FSJ C41 C51 DOUB N N 30 FSJ O51 C51 SING N N 31 FSJ C51 C61 SING N N 32 FSJ C61 F61 SING N N 33 FSJ C11 H1 SING N N 34 FSJ C12 H2 SING N N 35 FSJ C13 H3 SING N N 36 FSJ C21 H4 SING N N 37 FSJ C22 H5 SING N N 38 FSJ C22 H6 SING N N 39 FSJ C23 H7 SING N N 40 FSJ C31 H8 SING N N 41 FSJ C31 H9 SING N N 42 FSJ C32 H10 SING N N 43 FSJ C33 H11 SING N N 44 FSJ C41 H12 SING N N 45 FSJ C42 H13 SING N N 46 FSJ C52 H14 SING N N 47 FSJ C53 H15 SING N N 48 FSJ C53 H16 SING N N 49 FSJ C61 H17 SING N N 50 FSJ C61 H18 SING N N 51 FSJ C62 H19 SING N N 52 FSJ C83 H20 SING N N 53 FSJ C83 H21 SING N N 54 FSJ C83 H22 SING N N 55 FSJ C93 H23 SING N N 56 FSJ C93 H24 SING N N 57 FSJ C93 H25 SING N N 58 FSJ N12 H26 SING N N 59 FSJ N12 H27 SING N N 60 FSJ N21 H29 SING N N 61 FSJ N21 H30 SING N N 62 FSJ N32 H32 SING N N 63 FSJ N32 H33 SING N N 64 FSJ N33 H35 SING N N 65 FSJ O23 H37 SING N N 66 FSJ O43 H38 SING N N 67 FSJ O52 H39 SING N N 68 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor FSJ SMILES ACDLabs 12.01 "C1(OC(=CCC1N)CF)OC2C(CC(C(C2O)OC3OCC(C(C3O)NC)(C)O)N)N" FSJ InChI InChI 1.03 "InChI=1S/C19H35FN4O7/c1-19(27)7-28-18(13(26)16(19)24-2)31-15-11(23)5-10(22)14(12(15)25)30-17-9(21)4-3-8(6-20)29-17/h3,9-18,24-27H,4-7,21-23H2,1-2H3/t9-,10+,11-,12+,13-,14-,15+,16-,17-,18-,19+/m1/s1" FSJ InChIKey InChI 1.03 WYTHUXIFAFNYLB-YFMIWBNJSA-N FSJ SMILES_CANONICAL CACTVS 3.385 "CN[C@@H]1[C@@H](O)[C@H](OC[C@]1(C)O)O[C@H]2[C@H](N)C[C@H](N)[C@@H](O[C@H]3OC(=CC[C@H]3N)CF)[C@@H]2O" FSJ SMILES CACTVS 3.385 "CN[CH]1[CH](O)[CH](OC[C]1(C)O)O[CH]2[CH](N)C[CH](N)[CH](O[CH]3OC(=CC[CH]3N)CF)[CH]2O" FSJ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C[C@@]1(CO[C@@H]([C@@H]([C@H]1NC)O)O[C@H]2[C@@H](C[C@@H]([C@H]([C@@H]2O)O[C@@H]3[C@@H](CC=C(O3)CF)N)N)N)O" FSJ SMILES "OpenEye OEToolkits" 2.0.6 "CC1(COC(C(C1NC)O)OC2C(CC(C(C2O)OC3C(CC=C(O3)CF)N)N)N)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FSJ "SYSTEMATIC NAME" ACDLabs 12.01 "(1S,2S,3R,4S,6R)-4,6-diamino-3-{[(2S,3R)-3-amino-6-(fluoromethyl)-3,4-dihydro-2H-pyran-2-yl]oxy}-2-hydroxycyclohexyl 3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranoside" FSJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{R},3~{R},4~{R},5~{R})-2-[(1~{S},2~{S},3~{R},4~{S},6~{R})-4,6-bis(azanyl)-3-[[(2~{S},3~{R})-3-azanyl-6-(fluoranylmethyl)-3,4-dihydro-2~{H}-pyran-2-yl]oxy]-2-oxidanyl-cyclohexyl]oxy-5-methyl-4-(methylamino)oxane-3,5-diol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site FSJ "Create component" 2018-01-04 PDBJ FSJ "Initial release" 2018-05-30 RCSB FSJ "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id FSJ _pdbx_chem_comp_synonyms.name "6'-fluoro sisomicin" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##