data_G0W # _chem_comp.id G0W _chem_comp.name "1,3-BIS[5(DIETHYL-O-NITROBENZYLAMMONIUM)PENTYL]-6-METHYLURACIL" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C37 H56 N6 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 2 _chem_comp.pdbx_initial_date 2015-10-19 _chem_comp.pdbx_modified_date 2016-03-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 680.877 _chem_comp.one_letter_code ? _chem_comp.three_letter_code G0W _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5FKJ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal G0W C01 C01 C 0 1 N N N 25.357 -20.482 96.309 -8.806 -1.673 -0.586 C01 G0W 1 G0W C02 C02 C 0 1 N N N 24.056 -21.280 96.064 -8.191 -0.904 0.585 C02 G0W 2 G0W N03 N03 N 1 1 N N N 23.041 -20.537 95.112 -7.652 0.374 0.102 N03 G0W 3 G0W C04 C04 C 0 1 N N N 23.001 -21.269 93.744 -7.165 1.162 1.242 C04 G0W 4 G0W C05 C05 C 0 1 N N N 24.087 -22.298 93.470 -6.696 2.533 0.752 C05 G0W 5 G0W C06 C06 C 0 1 N N N 21.628 -20.593 95.780 -6.543 0.119 -0.826 C06 G0W 6 G0W C07 C07 C 0 1 N N N 20.488 -19.750 95.103 -5.441 -0.658 -0.103 C07 G0W 7 G0W C08 C08 C 0 1 N N N 19.386 -20.549 94.341 -4.286 -0.924 -1.070 C08 G0W 8 G0W C09 C09 C 0 1 N N N 18.828 -19.890 93.045 -3.184 -1.702 -0.347 C09 G0W 9 G0W C10 C10 C 0 1 N N N 17.745 -18.796 93.252 -2.028 -1.968 -1.314 C10 G0W 10 G0W N11 N11 N 0 1 N N N 16.745 -18.699 92.134 -0.973 -2.712 -0.621 N11 G0W 11 G0W C12 C12 C 0 1 N N N 16.866 -17.800 91.039 -0.994 -4.080 -0.627 C12 G0W 12 G0W C13 C13 C 0 1 N N N 18.067 -16.892 90.986 -2.096 -4.818 -1.342 C13 G0W 13 G0W C14 C14 C 0 1 N N N 15.896 -17.802 90.088 -0.021 -4.766 0.011 C14 G0W 14 G0W C15 C15 C 0 1 N N N 14.714 -18.682 90.121 1.004 -4.050 0.676 C15 G0W 15 G0W O16 O16 O 0 1 N N N 13.832 -18.695 89.274 1.892 -4.647 1.258 O16 G0W 16 G0W N17 N17 N 0 1 N N N 14.606 -19.581 91.241 0.988 -2.702 0.658 N17 G0W 17 G0W C18 C18 C 0 1 N N N 13.445 -20.523 91.373 2.044 -1.951 1.341 C18 G0W 18 G0W C19 C19 C 0 1 N N N 12.429 -20.092 92.469 3.199 -1.696 0.371 C19 G0W 19 G0W C20 C20 C 0 1 N N N 10.982 -20.629 92.254 4.302 -0.912 1.085 C20 G0W 20 G0W C21 C21 C 0 1 N N N 10.294 -21.416 93.430 5.457 -0.657 0.115 C21 G0W 21 G0W C22 C22 C 0 1 N N N 10.994 -22.714 93.903 6.559 0.127 0.829 C22 G0W 22 G0W N23 N23 N 1 1 N N N 10.051 -23.902 94.433 7.668 0.372 -0.103 N23 G0W 23 G0W C24 C24 C 0 1 N N N 10.670 -24.423 95.766 8.206 -0.913 -0.571 C24 G0W 24 G0W C25 C25 C 0 1 N N N 12.092 -24.961 95.598 8.595 -1.773 0.633 C25 G0W 25 G0W C26 C26 C 0 1 N N N 8.602 -23.361 94.708 7.181 1.147 -1.251 C26 G0W 26 G0W C27 C27 C 0 1 N N N 8.296 -23.058 96.177 6.714 2.524 -0.776 C27 G0W 27 G0W C28 C28 C 0 1 N N N 9.991 -25.070 93.401 8.727 1.125 0.583 C28 G0W 28 G0W C29 C29 C 0 1 Y N N 8.776 -25.254 92.482 9.873 1.359 -0.367 C29 G0W 29 G0W C30 C30 C 0 1 Y N N 7.698 -26.048 92.884 9.807 0.878 -1.661 C30 G0W 30 G0W C31 C31 C 0 1 Y N N 6.557 -26.262 92.104 10.858 1.093 -2.533 C31 G0W 31 G0W C32 C32 C 0 1 Y N N 6.470 -25.674 90.858 11.975 1.789 -2.110 C32 G0W 32 G0W C33 C33 C 0 1 Y N N 7.521 -24.872 90.398 12.041 2.271 -0.816 C33 G0W 33 G0W C34 C34 C 0 1 Y N N 8.657 -24.661 91.190 10.988 2.060 0.054 C34 G0W 34 G0W N35 N35 N 1 1 N N N 9.703 -23.766 90.536 11.056 2.580 1.438 N35 G0W 35 G0W O36 O36 O 0 1 N N N 9.328 -23.183 89.514 11.996 3.274 1.782 O36 G0W 36 G0W O37 O37 O -1 1 N N N 10.812 -23.619 90.946 10.173 2.313 2.233 O37 G0W 37 G0W C38 C38 C 0 1 N N N 15.612 -19.579 92.217 0.009 -2.043 0.009 C38 G0W 38 G0W O39 O39 O 0 1 N N N 15.549 -20.340 93.183 0.011 -0.828 -0.002 O39 G0W 39 G0W C40 C40 C 0 1 N N N 23.512 -19.009 94.784 -8.710 1.120 -0.592 C40 G0W 40 G0W C41 C41 C 0 1 Y N N 24.105 -18.675 93.401 -9.849 1.380 0.359 C41 G0W 41 G0W C42 C42 C 0 1 Y N N 25.406 -19.092 93.078 -9.773 0.935 1.666 C42 G0W 42 G0W C43 C43 C 0 1 Y N N 26.012 -18.832 91.842 -10.819 1.173 2.539 C43 G0W 43 G0W C44 C44 C 0 1 Y N N 25.332 -18.127 90.867 -11.940 1.855 2.105 C44 G0W 44 G0W C45 C45 C 0 1 Y N N 24.034 -17.677 91.132 -12.015 2.301 0.798 C45 G0W 45 G0W C46 C46 C 0 1 Y N N 23.435 -17.944 92.367 -10.968 2.067 -0.073 C46 G0W 46 G0W N47 N47 N 1 1 N N N 22.024 -17.375 92.475 -11.047 2.549 -1.471 N47 G0W 47 G0W O48 O48 O 0 1 N N N 21.730 -16.581 91.594 -12.068 3.073 -1.877 O48 G0W 48 G0W O49 O49 O -1 1 N N N 21.251 -17.668 93.350 -10.090 2.420 -2.214 O49 G0W 49 G0W H01 H01 H 0 1 N N N 26.018 -21.053 96.978 -8.040 -1.863 -1.339 H01 G0W 50 G0W H01A H01A H 0 0 N N N 25.867 -20.309 95.350 -9.206 -2.622 -0.228 H01A G0W 51 G0W H01B H01B H 0 0 N N N 25.112 -19.516 96.774 -9.610 -1.083 -1.026 H01B G0W 52 G0W H02 H02 H 0 1 N N N 24.319 -22.246 95.609 -8.956 -0.715 1.337 H02 G0W 53 G0W H02A H02A H 0 0 N N N 23.564 -21.453 97.033 -7.387 -1.495 1.025 H02A G0W 54 G0W H04 H04 H 0 1 N N N 22.032 -21.785 93.674 -7.970 1.291 1.965 H04 G0W 55 G0W H04A H04A H 0 0 N N N 23.066 -20.503 92.957 -6.332 0.641 1.715 H04A G0W 56 G0W H05 H05 H 0 1 N N N 23.936 -22.734 92.471 -5.833 2.409 0.097 H05 G0W 57 G0W H05A H05A H 0 0 N N N 25.072 -21.811 93.512 -7.503 3.018 0.202 H05A G0W 58 G0W H05B H05B H 0 0 N N N 24.038 -23.093 94.228 -6.418 3.149 1.607 H05B G0W 59 G0W H06 H06 H 0 1 N N N 21.305 -21.644 95.786 -6.904 -0.466 -1.672 H06 G0W 60 G0W H06A H06A H 0 0 N N N 21.735 -20.236 96.815 -6.143 1.067 -1.185 H06A G0W 61 G0W H07 H07 H 0 1 N N N 19.991 -19.166 95.892 -5.080 -0.074 0.743 H07 G0W 62 G0W H07A H07A H 0 0 N N N 20.962 -19.066 94.384 -5.841 -1.607 0.255 H07A G0W 63 G0W H08 H08 H 0 1 N N N 19.811 -21.525 94.065 -4.647 -1.509 -1.916 H08 G0W 64 G0W H08A H08A H 0 0 N N N 18.542 -20.698 95.031 -3.886 0.024 -1.428 H08A G0W 65 G0W H09 H09 H 0 1 N N N 19.672 -19.431 92.510 -2.822 -1.117 0.499 H09 G0W 66 G0W H09A H09A H 0 0 N N N 18.389 -20.685 92.425 -3.584 -2.650 0.011 H09A G0W 67 G0W H10 H10 H 0 1 N N N 17.202 -19.020 94.182 -2.390 -2.552 -2.160 H10 G0W 68 G0W H10A H10A H 0 0 N N N 18.251 -17.824 93.348 -1.629 -1.019 -1.672 H10A G0W 69 G0W H13 H13 H 0 1 N N N 18.013 -16.263 90.085 -1.800 -5.001 -2.375 H13 G0W 70 G0W H13A H13A H 0 0 N N N 18.082 -16.251 91.880 -2.280 -5.769 -0.842 H13A G0W 71 G0W H13B H13B H 0 0 N N N 18.984 -17.499 90.955 -3.006 -4.217 -1.325 H13B G0W 72 G0W H14 H14 H 0 1 N N N 15.997 -17.118 89.258 -0.025 -5.846 0.015 H14 G0W 73 G0W H18 H18 H 0 1 N N N 12.920 -20.568 90.408 1.645 -0.998 1.689 H18 G0W 74 G0W H18A H18A H 0 0 N N N 13.831 -21.521 91.627 2.405 -2.526 2.194 H18A G0W 75 G0W H19 H19 H 0 1 N N N 12.792 -20.462 93.439 3.598 -2.649 0.023 H19 G0W 76 G0W H19A H19A H 0 0 N N N 12.389 -18.993 92.487 2.838 -1.121 -0.481 H19A G0W 77 G0W H20 H20 H 0 1 N N N 10.344 -19.763 92.025 3.902 0.041 1.433 H20 G0W 78 G0W H20A H20A H 0 0 N N N 11.011 -21.303 91.385 4.663 -1.487 1.938 H20A G0W 79 G0W H21 H21 H 0 1 N N N 10.232 -20.737 94.293 5.856 -1.610 -0.233 H21 G0W 80 G0W H21A H21A H 0 0 N N N 9.279 -21.685 93.102 5.095 -0.082 -0.738 H21A G0W 81 G0W H22 H22 H 0 1 N N N 11.575 -23.105 93.055 6.160 1.080 1.177 H22 G0W 82 G0W H22A H22A H 0 0 N N N 11.677 -22.443 94.721 6.921 -0.448 1.681 H22A G0W 83 G0W H24 H24 H 0 1 N N N 10.693 -23.594 96.489 7.449 -1.431 -1.158 H24 G0W 84 G0W H24A H24A H 0 0 N N N 10.034 -25.232 96.155 9.086 -0.734 -1.190 H24A G0W 85 G0W H25 H25 H 0 1 N N N 12.469 -25.311 96.570 9.353 -1.254 1.220 H25 G0W 86 G0W H25A H25A H 0 0 N N N 12.085 -25.798 94.884 7.715 -1.951 1.251 H25A G0W 87 G0W H25B H25B H 0 0 N N N 12.744 -24.161 95.218 8.994 -2.725 0.285 H25B G0W 88 G0W H26 H26 H 0 1 N N N 8.469 -22.433 94.133 7.986 1.267 -1.976 H26 G0W 89 G0W H26A H26A H 0 0 N N N 7.883 -24.116 94.358 6.348 0.621 -1.717 H26A G0W 90 G0W H27 H27 H 0 1 N N N 7.265 -22.687 96.268 6.271 3.066 -1.611 H27 G0W 91 G0W H27A H27A H 0 0 N N N 8.409 -23.976 96.772 5.972 2.403 0.013 H27A G0W 92 G0W H27B H27B H 0 0 N N N 8.995 -22.293 96.547 7.566 3.084 -0.391 H27B G0W 93 G0W H28 H28 H 0 1 N N N 10.865 -24.951 92.743 8.332 2.083 0.919 H28 G0W 94 G0W H28A H28A H 0 0 N N N 10.090 -26.002 93.978 9.079 0.556 1.444 H28A G0W 95 G0W H30 H30 H 0 1 N N N 7.749 -26.523 93.852 8.934 0.335 -1.992 H30 G0W 96 G0W H31 H31 H 0 1 N N N 5.752 -26.881 92.473 10.807 0.717 -3.544 H31 G0W 97 G0W H32 H32 H 0 1 N N N 5.597 -25.832 90.242 12.797 1.956 -2.791 H32 G0W 98 G0W H33 H33 H 0 1 N N N 7.455 -24.412 89.423 12.914 2.814 -0.486 H33 G0W 99 G0W H40 H40 H 0 1 N N N 22.629 -18.367 94.916 -8.311 2.070 -0.948 H40 G0W 100 G0W H40A H40A H 0 0 N N N 24.274 -18.742 95.531 -9.070 0.537 -1.440 H40A G0W 101 G0W H42 H42 H 0 1 N N N 25.968 -19.641 93.819 -8.898 0.401 2.004 H42 G0W 102 G0W H43 H43 H 0 1 N N N 27.015 -19.184 91.650 -10.760 0.825 3.559 H43 G0W 103 G0W H44 H44 H 0 1 N N N 25.797 -17.926 89.913 -12.757 2.040 2.787 H44 G0W 104 G0W H45 H45 H 0 1 N N N 23.493 -17.122 90.380 -12.891 2.834 0.459 H45 G0W 105 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal G0W C01 C02 SING N N 1 G0W C02 N03 SING N N 2 G0W N03 C04 SING N N 3 G0W N03 C06 SING N N 4 G0W N03 C40 SING N N 5 G0W C04 C05 SING N N 6 G0W C06 C07 SING N N 7 G0W C07 C08 SING N N 8 G0W C08 C09 SING N N 9 G0W C09 C10 SING N N 10 G0W C10 N11 SING N N 11 G0W N11 C12 SING N N 12 G0W N11 C38 SING N N 13 G0W C12 C13 SING N N 14 G0W C12 C14 DOUB N N 15 G0W C14 C15 SING N N 16 G0W C15 O16 DOUB N N 17 G0W C15 N17 SING N N 18 G0W N17 C18 SING N N 19 G0W N17 C38 SING N N 20 G0W C18 C19 SING N N 21 G0W C19 C20 SING N N 22 G0W C20 C21 SING N N 23 G0W C21 C22 SING N N 24 G0W C22 N23 SING N N 25 G0W N23 C24 SING N N 26 G0W N23 C26 SING N N 27 G0W N23 C28 SING N N 28 G0W C24 C25 SING N N 29 G0W C26 C27 SING N N 30 G0W C28 C29 SING N N 31 G0W C29 C30 DOUB Y N 32 G0W C29 C34 SING Y N 33 G0W C30 C31 SING Y N 34 G0W C31 C32 DOUB Y N 35 G0W C32 C33 SING Y N 36 G0W C33 C34 DOUB Y N 37 G0W C34 N35 SING N N 38 G0W N35 O36 DOUB N N 39 G0W N35 O37 SING N N 40 G0W C38 O39 DOUB N N 41 G0W C40 C41 SING N N 42 G0W C41 C42 DOUB Y N 43 G0W C41 C46 SING Y N 44 G0W C42 C43 SING Y N 45 G0W C43 C44 DOUB Y N 46 G0W C44 C45 SING Y N 47 G0W C45 C46 DOUB Y N 48 G0W C46 N47 SING N N 49 G0W N47 O48 DOUB N N 50 G0W N47 O49 SING N N 51 G0W C01 H01 SING N N 52 G0W C01 H01A SING N N 53 G0W C01 H01B SING N N 54 G0W C02 H02 SING N N 55 G0W C02 H02A SING N N 56 G0W C04 H04 SING N N 57 G0W C04 H04A SING N N 58 G0W C05 H05 SING N N 59 G0W C05 H05A SING N N 60 G0W C05 H05B SING N N 61 G0W C06 H06 SING N N 62 G0W C06 H06A SING N N 63 G0W C07 H07 SING N N 64 G0W C07 H07A SING N N 65 G0W C08 H08 SING N N 66 G0W C08 H08A SING N N 67 G0W C09 H09 SING N N 68 G0W C09 H09A SING N N 69 G0W C10 H10 SING N N 70 G0W C10 H10A SING N N 71 G0W C13 H13 SING N N 72 G0W C13 H13A SING N N 73 G0W C13 H13B SING N N 74 G0W C14 H14 SING N N 75 G0W C18 H18 SING N N 76 G0W C18 H18A SING N N 77 G0W C19 H19 SING N N 78 G0W C19 H19A SING N N 79 G0W C20 H20 SING N N 80 G0W C20 H20A SING N N 81 G0W C21 H21 SING N N 82 G0W C21 H21A SING N N 83 G0W C22 H22 SING N N 84 G0W C22 H22A SING N N 85 G0W C24 H24 SING N N 86 G0W C24 H24A SING N N 87 G0W C25 H25 SING N N 88 G0W C25 H25A SING N N 89 G0W C25 H25B SING N N 90 G0W C26 H26 SING N N 91 G0W C26 H26A SING N N 92 G0W C27 H27 SING N N 93 G0W C27 H27A SING N N 94 G0W C27 H27B SING N N 95 G0W C28 H28 SING N N 96 G0W C28 H28A SING N N 97 G0W C30 H30 SING N N 98 G0W C31 H31 SING N N 99 G0W C32 H32 SING N N 100 G0W C33 H33 SING N N 101 G0W C40 H40 SING N N 102 G0W C40 H40A SING N N 103 G0W C42 H42 SING N N 104 G0W C43 H43 SING N N 105 G0W C44 H44 SING N N 106 G0W C45 H45 SING N N 107 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor G0W InChI InChI 1.03 "InChI=1S/C37H56N6O6/c1-6-42(7-2,29-32-20-12-14-22-34(32)40(46)47)26-18-10-16-24-38-31(5)28-36(44)39(37(38)45)25-17-11-19-27-43(8-3,9-4)30-33-21-13-15-23-35(33)41(48)49/h12-15,20-23,28H,6-11,16-19,24-27,29-30H2,1-5H3/q+2" G0W InChIKey InChI 1.03 WLTAFWKKNBLBHO-UHFFFAOYSA-N G0W SMILES_CANONICAL CACTVS 3.385 "CC[N+](CC)(CCCCCN1C(=CC(=O)N(CCCCC[N+](CC)(CC)Cc2ccccc2[N+]([O-])=O)C1=O)C)Cc3ccccc3[N+]([O-])=O" G0W SMILES CACTVS 3.385 "CC[N+](CC)(CCCCCN1C(=CC(=O)N(CCCCC[N+](CC)(CC)Cc2ccccc2[N+]([O-])=O)C1=O)C)Cc3ccccc3[N+]([O-])=O" G0W SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC[N+](CC)(CCCCCN1C(=CC(=O)N(C1=O)CCCCC[N+](CC)(CC)Cc2ccccc2[N+](=O)[O-])C)Cc3ccccc3[N+](=O)[O-]" G0W SMILES "OpenEye OEToolkits" 1.7.6 "CC[N+](CC)(CCCCCN1C(=CC(=O)N(C1=O)CCCCC[N+](CC)(CC)Cc2ccccc2[N+](=O)[O-])C)Cc3ccccc3[N+](=O)[O-]" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier G0W "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "5-[3-[5-[diethyl-[(2-nitrophenyl)methyl]azaniumyl]pentyl]-4-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]pentyl-diethyl-[(2-nitrophenyl)methyl]azanium" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site G0W "Create component" 2015-10-19 EBI G0W "Initial release" 2016-03-16 RCSB #