data_G88 # _chem_comp.id G88 _chem_comp.name "(2S)-2-(PHOSPHONOMETHYL)PENTANEDIOIC ACID" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C6 H11 O7 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2006-12-07 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 226.121 _chem_comp.one_letter_code ? _chem_comp.three_letter_code G88 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details "OpenEye/OEToolkits V1.4.2" _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2JBJ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal G88 O6 O6 O 0 1 N N N 14.059 48.828 40.870 -2.244 -0.710 -1.585 O6 G88 1 G88 C6 C6 C 0 1 N N N 14.069 47.592 40.648 -1.262 0.019 -1.584 C6 G88 2 G88 O7 O7 O 0 1 N N N 13.074 47.085 39.902 -1.249 1.276 -2.091 O7 G88 3 G88 C5 C5 C 0 1 N N N 15.199 46.746 41.265 0.085 -0.359 -1.028 C5 G88 4 G88 C4 C4 C 0 1 N N N 14.850 45.263 41.502 0.327 -1.870 -1.047 C4 G88 5 G88 C2 C2 C 0 1 N N R 16.127 44.492 41.965 0.325 -2.479 -2.462 C2 G88 6 G88 C3 C3 C 0 1 N N N 17.128 44.637 40.839 1.373 -1.833 -3.355 C3 G88 7 G88 O5 O5 O 0 1 N N N 17.019 43.885 39.741 0.822 -1.244 -4.449 O5 G88 8 G88 O4 O4 O 0 1 N N N 18.048 45.457 40.837 2.578 -1.846 -3.145 O4 G88 9 G88 C1 C1 C 0 1 N N N 16.624 45.123 43.274 0.568 -3.989 -2.419 C1 G88 10 G88 P1 P1 P 0 1 N N N 17.595 43.979 44.230 0.499 -4.810 -4.030 P1 G88 11 G88 O2 O2 O 0 1 N N N 16.637 43.101 45.074 1.503 -4.299 -5.001 O2 G88 12 G88 O3 O3 O 0 1 N N N 18.442 43.015 43.024 -1.047 -4.632 -4.442 O3 G88 13 G88 O1 O1 O 0 1 N N N 18.791 44.654 45.256 0.620 -6.364 -3.630 O1 G88 14 G88 H7 H7 H 0 1 N N N 13.082 46.150 39.734 -2.122 1.532 -2.458 H7 G88 15 G88 H5C1 1H5C H 0 0 N N N 15.556 47.213 42.212 0.856 0.175 -1.594 H5C1 G88 16 G88 H5C2 2H5C H 0 0 N N N 16.123 46.829 40.647 0.143 0.020 -0.001 H5C2 G88 17 G88 H4C1 1H4C H 0 0 N N N 14.377 44.794 40.608 -0.442 -2.365 -0.441 H4C1 G88 18 G88 H4C2 2H4C H 0 0 N N N 14.002 45.139 42.215 1.288 -2.065 -0.555 H4C2 G88 19 G88 H2 H2 H 0 1 N N N 15.946 43.411 42.168 -0.661 -2.300 -2.909 H2 G88 20 G88 H1C1 1H1C H 0 0 N N N 15.779 45.537 43.872 -0.178 -4.474 -1.779 H1C1 G88 21 G88 H1C2 2H1C H 0 0 N N N 17.182 46.069 43.083 1.551 -4.196 -1.982 H1C2 G88 22 G88 H5 H5 H 0 1 N N N 17.647 43.976 39.034 1.460 -0.826 -5.065 H5 G88 23 G88 H3 H3 H 0 1 N N N 18.960 42.404 43.535 -1.333 -4.975 -5.315 H3 G88 24 G88 H1 H1 H 0 1 N N N 19.309 44.043 45.767 0.641 -7.025 -4.355 H1 G88 25 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal G88 O6 C6 DOUB N N 1 G88 C6 O7 SING N N 2 G88 C6 C5 SING N N 3 G88 O7 H7 SING N N 4 G88 C5 H5C1 SING N N 5 G88 C5 H5C2 SING N N 6 G88 C5 C4 SING N N 7 G88 C4 H4C1 SING N N 8 G88 C4 H4C2 SING N N 9 G88 C4 C2 SING N N 10 G88 C2 H2 SING N N 11 G88 C2 C1 SING N N 12 G88 C2 C3 SING N N 13 G88 C3 O5 SING N N 14 G88 C3 O4 DOUB N N 15 G88 O5 H5 SING N N 16 G88 C1 H1C1 SING N N 17 G88 C1 H1C2 SING N N 18 G88 C1 P1 SING N N 19 G88 P1 O1 SING N N 20 G88 P1 O2 DOUB N N 21 G88 P1 O3 SING N N 22 G88 O3 H3 SING N N 23 G88 O1 H1 SING N N 24 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor G88 SMILES ACDLabs 10.04 "O=P(O)(O)CC(C(=O)O)CCC(=O)O" G88 SMILES_CANONICAL CACTVS 3.341 "OC(=O)CC[C@H](C[P](O)(O)=O)C(O)=O" G88 SMILES CACTVS 3.341 "OC(=O)CC[CH](C[P](O)(O)=O)C(O)=O" G88 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C(CC(=O)O)[C@H](CP(=O)(O)O)C(=O)O" G88 SMILES "OpenEye OEToolkits" 1.5.0 "C(CC(=O)O)C(CP(=O)(O)O)C(=O)O" G88 InChI InChI 1.03 "InChI=1S/C6H11O7P/c7-5(8)2-1-4(6(9)10)3-14(11,12)13/h4H,1-3H2,(H,7,8)(H,9,10)(H2,11,12,13)/t4-/m1/s1" G88 InChIKey InChI 1.03 ISEYJGQFXSTPMQ-SCSAIBSYSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier G88 "SYSTEMATIC NAME" ACDLabs 10.04 "(2S)-2-(phosphonomethyl)pentanedioic acid" G88 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S)-2-(phosphonomethyl)pentanedioic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site G88 "Create component" 2006-12-07 RCSB G88 "Modify descriptor" 2011-06-04 RCSB #