data_GC6 # _chem_comp.id GC6 _chem_comp.name "[(3R)-3-azanylpiperidin-1-yl]-[1-(2-azanylpyrimidin-4-yl)-6-[2-(1-oxidanylcyclohexyl)ethynyl]indol-3-yl]methanone" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H30 N6 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-08-18 _chem_comp.pdbx_modified_date 2021-08-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 458.555 _chem_comp.one_letter_code ? _chem_comp.three_letter_code GC6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7CP3 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal GC6 C10 C1 C 0 1 N N N -33.815 14.838 -12.257 -3.602 -1.060 -0.959 C10 GC6 1 GC6 N12 N1 N 0 1 N N N -34.231 14.566 -10.874 -4.698 -0.738 -0.243 N12 GC6 2 GC6 C13 C2 C 0 1 N N N -34.354 13.172 -10.322 -4.635 0.301 0.794 C13 GC6 3 GC6 C15 C3 C 0 1 N N N -35.970 13.925 -8.586 -6.569 -0.853 1.874 C15 GC6 4 GC6 C20 C4 C 0 1 Y N N -30.898 13.817 -13.284 -0.456 -2.121 -0.840 C20 GC6 5 GC6 C21 C5 C 0 1 Y N N -29.774 13.223 -13.865 0.894 -2.307 -0.766 C21 GC6 6 GC6 C22 C6 C 0 1 Y N N -29.894 12.190 -14.793 1.748 -1.213 -0.587 C22 GC6 7 GC6 C24 C7 C 0 1 N N N -27.667 11.037 -15.895 4.324 -1.588 -0.447 C24 GC6 8 GC6 C28 C8 C 0 1 N N N -25.583 8.087 -17.158 5.987 0.193 1.124 C28 GC6 9 GC6 C2 C9 C 0 1 Y N N -35.901 9.960 -16.274 1.278 4.165 -0.020 C2 GC6 10 GC6 C4 C10 C 0 1 Y N N -33.918 9.480 -17.278 -0.852 5.042 -0.091 C4 GC6 11 GC6 C5 C11 C 0 1 Y N N -33.316 10.422 -16.463 -1.362 3.769 -0.269 C5 GC6 12 GC6 C6 C12 C 0 1 Y N N -34.084 11.107 -15.558 -0.472 2.697 -0.321 C6 GC6 13 GC6 C8 C13 C 0 1 Y N N -34.321 12.854 -13.987 -2.249 1.056 -0.634 C8 GC6 14 GC6 C9 C14 C 0 1 Y N N -33.468 13.704 -13.264 -2.360 -0.294 -0.786 C9 GC6 15 GC6 C14 C15 C 0 1 N N N -35.729 12.947 -9.662 -5.169 -0.281 2.107 C14 GC6 16 GC6 C16 C16 C 0 1 N N R -35.868 15.324 -9.071 -6.501 -1.980 0.834 C16 GC6 17 GC6 C18 C17 C 0 1 N N N -34.560 15.597 -9.848 -5.979 -1.413 -0.490 C18 GC6 18 GC6 C19 C18 C 0 1 Y N N -32.160 13.310 -13.680 -0.989 -0.836 -0.743 C19 GC6 19 GC6 C23 C19 C 0 1 N N N -28.640 11.545 -15.410 3.164 -1.419 -0.510 C23 GC6 20 GC6 C25 C20 C 0 1 N N N -26.409 10.388 -16.516 5.778 -1.800 -0.368 C25 GC6 21 GC6 C27 C21 C 0 1 N N N -26.655 8.876 -16.430 6.480 -0.454 -0.172 C27 GC6 22 GC6 C29 C22 C 0 1 N N N -25.535 8.504 -18.612 6.306 -0.725 2.306 C29 GC6 23 GC6 C30 C23 C 0 1 N N N -25.250 10.003 -18.710 5.604 -2.070 2.110 C30 GC6 24 GC6 C31 C24 C 0 1 N N N -26.265 10.852 -17.946 6.096 -2.718 0.814 C31 GC6 25 GC6 C32 C25 C 0 1 Y N N -31.152 11.713 -15.145 1.229 0.074 -0.484 C32 GC6 26 GC6 C33 C26 C 0 1 Y N N -32.273 12.329 -14.549 -0.142 0.270 -0.563 C33 GC6 27 GC6 N1 N2 N 0 1 N N N -37.334 9.723 -16.142 2.640 4.376 0.110 N1 GC6 28 GC6 N3 N3 N 0 1 Y N N -35.215 9.283 -17.146 0.457 5.204 0.028 N3 GC6 29 GC6 N7 N4 N 0 1 Y N N -33.589 12.039 -14.744 -0.942 1.397 -0.499 N7 GC6 30 GC6 N17 N5 N 0 1 N N N -35.908 16.209 -7.921 -7.842 -2.545 0.634 N17 GC6 31 GC6 N34 N6 N 0 1 Y N N -35.370 10.861 -15.490 0.829 2.932 -0.194 N34 GC6 32 GC6 O11 O1 O 0 1 N N N -33.735 15.944 -12.589 -3.640 -1.989 -1.744 O11 GC6 33 GC6 O26 O2 O 0 1 N N N -25.295 10.737 -15.779 6.238 -2.405 -1.578 O26 GC6 34 GC6 H1 H1 H 0 1 N N N -34.228 12.450 -11.142 -3.602 0.621 0.930 H1 GC6 35 GC6 H2 H2 H 0 1 N N N -33.566 13.014 -9.571 -5.247 1.153 0.496 H2 GC6 36 GC6 H3 H3 H 0 1 N N N -36.979 13.763 -8.179 -6.962 -1.246 2.813 H3 GC6 37 GC6 H4 H4 H 0 1 N N N -35.225 13.770 -7.792 -7.227 -0.066 1.507 H4 GC6 38 GC6 H5 H5 H 0 1 N N N -30.809 14.622 -12.569 -1.112 -2.969 -0.979 H5 GC6 39 GC6 H6 H6 H 0 1 N N N -28.790 13.572 -13.589 1.304 -3.303 -0.846 H6 GC6 40 GC6 H7 H7 H 0 1 N N N -25.813 7.013 -17.094 6.487 1.152 1.263 H7 GC6 41 GC6 H8 H8 H 0 1 N N N -24.606 8.281 -16.690 4.910 0.350 1.065 H8 GC6 42 GC6 H9 H9 H 0 1 N N N -33.342 8.922 -18.002 -1.514 5.895 -0.051 H9 GC6 43 GC6 H10 H10 H 0 1 N N N -32.256 10.615 -16.539 -2.426 3.610 -0.369 H10 GC6 44 GC6 H11 H11 H 0 1 N N N -35.400 12.860 -13.937 -3.077 1.749 -0.621 H11 GC6 45 GC6 H12 H12 H 0 1 N N N -36.515 13.052 -10.425 -4.504 -1.073 2.451 H12 GC6 46 GC6 H13 H13 H 0 1 N N N -35.762 11.932 -9.239 -5.218 0.506 2.860 H13 GC6 47 GC6 H14 H14 H 0 1 N N N -36.718 15.540 -9.734 -5.826 -2.760 1.186 H14 GC6 48 GC6 H15 H15 H 0 1 N N N -33.732 15.640 -9.125 -6.698 -0.698 -0.891 H15 GC6 49 GC6 H16 H16 H 0 1 N N N -34.656 16.569 -10.354 -5.832 -2.225 -1.202 H16 GC6 50 GC6 H17 H17 H 0 1 N N N -27.632 8.648 -16.881 6.253 0.200 -1.014 H17 GC6 51 GC6 H18 H18 H 0 1 N N N -26.661 8.576 -15.372 7.557 -0.611 -0.113 H18 GC6 52 GC6 H19 H19 H 0 1 N N N -26.502 8.284 -19.087 7.383 -0.881 2.364 H19 GC6 53 GC6 H20 H20 H 0 1 N N N -24.738 7.946 -19.126 5.955 -0.263 3.229 H20 GC6 54 GC6 H21 H21 H 0 1 N N N -24.249 10.198 -18.298 5.831 -2.724 2.952 H21 GC6 55 GC6 H22 H22 H 0 1 N N N -25.274 10.296 -19.770 4.527 -1.913 2.051 H22 GC6 56 GC6 H23 H23 H 0 1 N N N -25.930 11.900 -17.950 5.597 -3.676 0.674 H23 GC6 57 GC6 H24 H24 H 0 1 N N N -27.242 10.778 -18.446 7.174 -2.875 0.873 H24 GC6 58 GC6 H25 H25 H 0 1 N N N -31.267 10.901 -15.848 1.891 0.917 -0.345 H25 GC6 59 GC6 H26 H26 H 0 1 N N N -37.617 9.017 -16.791 3.252 3.624 0.072 H26 GC6 60 GC6 H27 H27 H 0 1 N N N -37.537 9.421 -15.211 2.982 5.274 0.237 H27 GC6 61 GC6 H28 H28 H 0 1 N N N -36.749 16.047 -7.404 -7.823 -3.289 -0.047 H28 GC6 62 GC6 H29 H29 H 0 1 N N N -35.117 16.030 -7.335 -8.234 -2.864 1.508 H29 GC6 63 GC6 H31 H31 H 0 1 N N N -25.401 10.439 -14.883 5.834 -3.263 -1.767 H31 GC6 64 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GC6 C30 C29 SING N N 1 GC6 C30 C31 SING N N 2 GC6 C29 C28 SING N N 3 GC6 C31 C25 SING N N 4 GC6 C4 N3 DOUB Y N 5 GC6 C4 C5 SING Y N 6 GC6 C28 C27 SING N N 7 GC6 N3 C2 SING Y N 8 GC6 C25 C27 SING N N 9 GC6 C25 C24 SING N N 10 GC6 C25 O26 SING N N 11 GC6 C5 C6 DOUB Y N 12 GC6 C2 N1 SING N N 13 GC6 C2 N34 DOUB Y N 14 GC6 C24 C23 TRIP N N 15 GC6 C6 N34 SING Y N 16 GC6 C6 N7 SING N N 17 GC6 C23 C22 SING N N 18 GC6 C32 C22 DOUB Y N 19 GC6 C32 C33 SING Y N 20 GC6 C22 C21 SING Y N 21 GC6 N7 C33 SING Y N 22 GC6 N7 C8 SING Y N 23 GC6 C33 C19 DOUB Y N 24 GC6 C8 C9 DOUB Y N 25 GC6 C21 C20 DOUB Y N 26 GC6 C19 C20 SING Y N 27 GC6 C19 C9 SING Y N 28 GC6 C9 C10 SING N N 29 GC6 O11 C10 DOUB N N 30 GC6 C10 N12 SING N N 31 GC6 N12 C13 SING N N 32 GC6 N12 C18 SING N N 33 GC6 C13 C14 SING N N 34 GC6 C18 C16 SING N N 35 GC6 C14 C15 SING N N 36 GC6 C16 C15 SING N N 37 GC6 C16 N17 SING N N 38 GC6 C13 H1 SING N N 39 GC6 C13 H2 SING N N 40 GC6 C15 H3 SING N N 41 GC6 C15 H4 SING N N 42 GC6 C20 H5 SING N N 43 GC6 C21 H6 SING N N 44 GC6 C28 H7 SING N N 45 GC6 C28 H8 SING N N 46 GC6 C4 H9 SING N N 47 GC6 C5 H10 SING N N 48 GC6 C8 H11 SING N N 49 GC6 C14 H12 SING N N 50 GC6 C14 H13 SING N N 51 GC6 C16 H14 SING N N 52 GC6 C18 H15 SING N N 53 GC6 C18 H16 SING N N 54 GC6 C27 H17 SING N N 55 GC6 C27 H18 SING N N 56 GC6 C29 H19 SING N N 57 GC6 C29 H20 SING N N 58 GC6 C30 H21 SING N N 59 GC6 C30 H22 SING N N 60 GC6 C31 H23 SING N N 61 GC6 C31 H24 SING N N 62 GC6 C32 H25 SING N N 63 GC6 N1 H26 SING N N 64 GC6 N1 H27 SING N N 65 GC6 N17 H28 SING N N 66 GC6 N17 H29 SING N N 67 GC6 O26 H31 SING N N 68 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor GC6 InChI InChI 1.03 "InChI=1S/C26H30N6O2/c27-19-5-4-14-31(16-19)24(33)21-17-32(23-9-13-29-25(28)30-23)22-15-18(6-7-20(21)22)8-12-26(34)10-2-1-3-11-26/h6-7,9,13,15,17,19,34H,1-5,10-11,14,16,27H2,(H2,28,29,30)/t19-/m1/s1" GC6 InChIKey InChI 1.03 DADSGHOHYQROCR-LJQANCHMSA-N GC6 SMILES_CANONICAL CACTVS 3.385 "N[C@@H]1CCCN(C1)C(=O)c2cn(c3ccnc(N)n3)c4cc(ccc24)C#CC5(O)CCCCC5" GC6 SMILES CACTVS 3.385 "N[CH]1CCCN(C1)C(=O)c2cn(c3ccnc(N)n3)c4cc(ccc24)C#CC5(O)CCCCC5" GC6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1C#CC3(CCCCC3)O)n(cc2C(=O)N4CCC[C@H](C4)N)c5ccnc(n5)N" GC6 SMILES "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1C#CC3(CCCCC3)O)n(cc2C(=O)N4CCCC(C4)N)c5ccnc(n5)N" # _pdbx_chem_comp_identifier.comp_id GC6 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(3~{R})-3-azanylpiperidin-1-yl]-[1-(2-azanylpyrimidin-4-yl)-6-[2-(1-oxidanylcyclohexyl)ethynyl]indol-3-yl]methanone" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site GC6 "Create component" 2020-08-18 PDBJ GC6 "Initial release" 2021-08-11 RCSB ##