data_GD9 # _chem_comp.id GD9 _chem_comp.name "2-(1H-indazol-4-yl)-6-{[4-(methylsulfonyl)piperazin-1-yl]methyl}-4-morpholin-4-yl-thieno[3,2-d]pyrimidine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H27 N7 O3 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2008-06-03 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 513.636 _chem_comp.one_letter_code ? _chem_comp.three_letter_code GD9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3DBS _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal GD9 O3 O3 O 0 1 N N N 19.686 59.525 24.439 -2.010 5.534 -0.883 O3 GD9 1 GD9 C4 C4 C 0 1 Y N N 22.255 61.781 22.108 -2.161 1.643 0.424 C4 GD9 2 GD9 C5 C5 C 0 1 Y N N 21.375 65.398 21.367 0.953 -0.381 1.714 C5 GD9 3 GD9 C6 C6 C 0 1 Y N N 22.592 65.205 20.863 -0.043 -1.193 1.400 C6 GD9 4 GD9 N1 N1 N 0 1 Y N N 24.157 63.285 20.755 -2.413 -1.056 0.506 N1 GD9 5 GD9 C7 C7 C 0 1 N N N 20.691 66.743 21.278 2.290 -0.839 2.237 C7 GD9 6 GD9 C8 C8 C 0 1 Y N N 25.609 61.469 20.667 -4.665 -0.905 -0.343 C8 GD9 7 GD9 N2 N2 N 0 1 Y N N 23.448 61.257 21.720 -3.283 1.045 0.051 N2 GD9 8 GD9 C9 C9 C 0 1 N N N 19.921 68.393 19.672 4.432 -1.742 1.558 C9 GD9 9 GD9 C10 C10 C 0 1 N N N 19.530 68.524 18.196 5.272 -2.130 0.337 C10 GD9 10 GD9 C11 C11 C 0 1 N N N 18.885 66.207 18.208 4.308 -0.127 -0.860 C11 GD9 11 GD9 C12 C12 C 0 1 N N N 18.981 66.172 19.714 3.505 0.182 0.408 C12 GD9 12 GD9 N3 N3 N 0 1 N N N 21.380 60.990 22.810 -2.050 3.023 0.375 N3 GD9 13 GD9 C13 C13 C 0 1 N N N 17.257 69.177 15.870 7.225 -1.335 -2.568 C13 GD9 14 GD9 C14 C14 C 0 1 N N N 21.950 59.888 23.583 -3.292 3.634 -0.120 C14 GD9 15 GD9 C15 C15 C 0 1 N N N 21.062 59.602 24.789 -3.148 5.158 -0.102 C15 GD9 16 GD9 N4 N4 N 0 1 N N N 20.161 66.980 19.955 3.203 -1.073 1.110 N4 GD9 17 GD9 O2 O2 O 0 1 N N N 19.233 67.342 15.453 7.863 -1.047 0.007 O2 GD9 18 GD9 S2 S2 S 0 1 N N N 18.013 67.564 16.242 7.002 -0.491 -0.977 S2 GD9 19 GD9 O1 O1 O 0 1 N N N 17.038 66.497 15.981 6.918 0.915 -1.166 O1 GD9 20 GD9 N5 N5 N 0 1 N N N 18.472 67.555 17.898 5.483 -0.929 -0.486 N5 GD9 21 GD9 S1 S1 S 0 1 Y N N 20.661 64.068 22.110 0.520 1.296 1.437 S1 GD9 22 GD9 C2 C2 C 0 1 Y N N 22.993 63.829 21.110 -1.237 -0.532 0.916 C2 GD9 23 GD9 C1 C1 C 0 1 Y N N 22.032 63.123 21.786 -1.086 0.856 0.876 C1 GD9 24 GD9 C3 C3 C 0 1 Y N N 24.375 61.989 21.052 -3.396 -0.280 0.095 C3 GD9 25 GD9 C18 C18 C 0 1 Y N N 26.254 61.914 19.517 -5.718 -0.116 -0.781 C18 GD9 26 GD9 C19 C19 C 0 1 Y N N 27.490 61.382 19.182 -6.907 -0.698 -1.192 C19 GD9 27 GD9 C20 C20 C 0 1 Y N N 28.088 60.437 19.990 -7.065 -2.066 -1.174 C20 GD9 28 GD9 C21 C21 C 0 1 Y N N 27.454 60.012 21.141 -6.025 -2.884 -0.739 C21 GD9 29 GD9 N6 N6 N 0 1 Y N N 27.863 59.090 22.079 -5.879 -4.241 -0.608 N6 GD9 30 GD9 C22 C22 C 0 1 Y N N 26.251 60.535 21.438 -4.810 -2.308 -0.324 C22 GD9 31 GD9 C23 C23 C 0 1 Y N N 25.828 59.920 22.652 -3.956 -3.371 0.048 C23 GD9 32 GD9 N7 N7 N 0 1 Y N N 26.803 59.061 23.031 -4.594 -4.495 -0.113 N7 GD9 33 GD9 C16 C16 C 0 1 N N N 19.250 60.743 23.850 -0.783 4.957 -0.428 C16 GD9 34 GD9 C17 C17 C 0 1 N N N 19.955 60.889 22.500 -0.904 3.431 -0.450 C17 GD9 35 GD9 H6 H6 H 0 1 N N N 23.185 65.950 20.353 0.029 -2.266 1.497 H6 GD9 36 GD9 H7 H7 H 0 1 N N N 19.863 66.768 22.002 2.707 -0.071 2.889 H7 GD9 37 GD9 H7A H7A H 0 1 N N N 21.433 67.524 21.499 2.163 -1.763 2.800 H7A GD9 38 GD9 H9 H9 H 0 1 N N N 20.833 68.975 19.871 4.173 -2.639 2.121 H9 GD9 39 GD9 H9A H9A H 0 1 N N N 19.115 68.778 20.314 5.003 -1.066 2.193 H9A GD9 40 GD9 H10 H10 H 0 1 N N N 19.165 69.543 17.999 6.235 -2.522 0.665 H10 GD9 41 GD9 H10A H10A H 0 0 N N N 20.405 68.327 17.560 4.745 -2.885 -0.246 H10A GD9 42 GD9 H11 H11 H 0 1 N N N 19.855 65.974 17.744 3.688 -0.690 -1.558 H11 GD9 43 GD9 H11A H11A H 0 0 N N N 18.178 65.458 17.821 4.633 0.804 -1.324 H11A GD9 44 GD9 H12 H12 H 0 1 N N N 18.086 66.592 20.196 4.090 0.831 1.059 H12 GD9 45 GD9 H12A H12A H 0 0 N N N 19.048 65.156 20.130 2.574 0.680 0.137 H12A GD9 46 GD9 H13 H13 H 0 1 N N N 17.104 69.735 16.805 7.139 -2.412 -2.422 H13 GD9 47 GD9 H13A H13A H 0 0 N N N 17.922 69.749 15.206 6.459 -1.000 -3.267 H13A GD9 48 GD9 H13B H13B H 0 0 N N N 16.288 69.022 15.374 8.211 -1.100 -2.969 H13B GD9 49 GD9 H14 H14 H 0 1 N N N 22.011 58.990 22.951 -3.481 3.299 -1.140 H14 GD9 50 GD9 H14A H14A H 0 0 N N N 22.958 60.163 23.926 -4.123 3.339 0.520 H14A GD9 51 GD9 H15 H15 H 0 1 N N N 21.192 60.414 25.520 -3.012 5.498 0.925 H15 GD9 52 GD9 H15A H15A H 0 0 N N N 21.360 58.629 25.205 -4.044 5.614 -0.522 H15A GD9 53 GD9 H18 H18 H 0 1 N N N 25.796 62.666 18.892 -5.611 0.959 -0.801 H18 GD9 54 GD9 H19 H19 H 0 1 N N N 27.988 61.710 18.282 -7.719 -0.072 -1.531 H19 GD9 55 GD9 H20 H20 H 0 1 N N N 29.052 60.030 19.722 -7.997 -2.505 -1.497 H20 GD9 56 GD9 HN6 HN6 H 0 1 N N N 28.711 58.561 22.090 -6.550 -4.910 -0.820 HN6 GD9 57 GD9 H23 H23 H 0 1 N N N 24.901 60.105 23.173 -2.947 -3.267 0.417 H23 GD9 58 GD9 H16 H16 H 0 1 N N N 18.160 60.722 23.705 0.030 5.267 -1.084 H16 GD9 59 GD9 H16A H16A H 0 0 N N N 19.494 61.594 24.504 -0.579 5.291 0.589 H16A GD9 60 GD9 H17 H17 H 0 1 N N N 19.606 61.789 21.972 0.008 2.987 -0.051 H17 GD9 61 GD9 H17A H17A H 0 0 N N N 19.744 60.036 21.838 -1.055 3.092 -1.475 H17A GD9 62 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GD9 O3 C15 SING N N 1 GD9 O3 C16 SING N N 2 GD9 C4 N2 DOUB Y N 3 GD9 C4 N3 SING N N 4 GD9 C4 C1 SING Y N 5 GD9 C5 C6 DOUB Y N 6 GD9 C5 C7 SING N N 7 GD9 C5 S1 SING Y N 8 GD9 C6 C2 SING Y N 9 GD9 N1 C2 SING Y N 10 GD9 N1 C3 DOUB Y N 11 GD9 C7 N4 SING N N 12 GD9 C8 C3 SING Y N 13 GD9 C8 C18 DOUB Y N 14 GD9 C8 C22 SING Y N 15 GD9 N2 C3 SING Y N 16 GD9 C9 C10 SING N N 17 GD9 C9 N4 SING N N 18 GD9 C10 N5 SING N N 19 GD9 C11 C12 SING N N 20 GD9 C11 N5 SING N N 21 GD9 C12 N4 SING N N 22 GD9 N3 C14 SING N N 23 GD9 N3 C17 SING N N 24 GD9 C13 S2 SING N N 25 GD9 C14 C15 SING N N 26 GD9 O2 S2 DOUB N N 27 GD9 S2 O1 DOUB N N 28 GD9 S2 N5 SING N N 29 GD9 S1 C1 SING Y N 30 GD9 C2 C1 DOUB Y N 31 GD9 C18 C19 SING Y N 32 GD9 C19 C20 DOUB Y N 33 GD9 C20 C21 SING Y N 34 GD9 C21 N6 SING Y N 35 GD9 C21 C22 DOUB Y N 36 GD9 N6 N7 SING Y N 37 GD9 C22 C23 SING Y N 38 GD9 C23 N7 DOUB Y N 39 GD9 C16 C17 SING N N 40 GD9 C6 H6 SING N N 41 GD9 C7 H7 SING N N 42 GD9 C7 H7A SING N N 43 GD9 C9 H9 SING N N 44 GD9 C9 H9A SING N N 45 GD9 C10 H10 SING N N 46 GD9 C10 H10A SING N N 47 GD9 C11 H11 SING N N 48 GD9 C11 H11A SING N N 49 GD9 C12 H12 SING N N 50 GD9 C12 H12A SING N N 51 GD9 C13 H13 SING N N 52 GD9 C13 H13A SING N N 53 GD9 C13 H13B SING N N 54 GD9 C14 H14 SING N N 55 GD9 C14 H14A SING N N 56 GD9 C15 H15 SING N N 57 GD9 C15 H15A SING N N 58 GD9 C18 H18 SING N N 59 GD9 C19 H19 SING N N 60 GD9 C20 H20 SING N N 61 GD9 N6 HN6 SING N N 62 GD9 C23 H23 SING N N 63 GD9 C16 H16 SING N N 64 GD9 C16 H16A SING N N 65 GD9 C17 H17 SING N N 66 GD9 C17 H17A SING N N 67 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor GD9 SMILES ACDLabs 10.04 "O=S(=O)(N1CCN(CC1)Cc3sc2c(nc(nc2c3)c5cccc4nncc45)N6CCOCC6)C" GD9 SMILES_CANONICAL CACTVS 3.341 "C[S](=O)(=O)N1CCN(CC1)Cc2sc3c(c2)nc(nc3N4CCOCC4)c5cccc6[nH]ncc56" GD9 SMILES CACTVS 3.341 "C[S](=O)(=O)N1CCN(CC1)Cc2sc3c(c2)nc(nc3N4CCOCC4)c5cccc6[nH]ncc56" GD9 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CS(=O)(=O)N1CCN(CC1)Cc2cc3c(s2)c(nc(n3)c4cccc5c4cn[nH]5)N6CCOCC6" GD9 SMILES "OpenEye OEToolkits" 1.5.0 "CS(=O)(=O)N1CCN(CC1)Cc2cc3c(s2)c(nc(n3)c4cccc5c4cn[nH]5)N6CCOCC6" GD9 InChI InChI 1.03 "InChI=1S/C23H27N7O3S2/c1-35(31,32)30-7-5-28(6-8-30)15-16-13-20-21(34-16)23(29-9-11-33-12-10-29)26-22(25-20)17-3-2-4-19-18(17)14-24-27-19/h2-4,13-14H,5-12,15H2,1H3,(H,24,27)" GD9 InChIKey InChI 1.03 LHNIIDJUOCFXAP-UHFFFAOYSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GD9 "SYSTEMATIC NAME" ACDLabs 10.04 "2-(1H-indazol-4-yl)-6-{[4-(methylsulfonyl)piperazin-1-yl]methyl}-4-morpholin-4-ylthieno[3,2-d]pyrimidine" GD9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "2-(1H-indazol-4-yl)-6-[(4-methylsulfonylpiperazin-1-yl)methyl]-4-morpholin-4-yl-thieno[2,3-e]pyrimidine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site GD9 "Create component" 2008-06-03 PDBJ GD9 "Modify aromatic_flag" 2011-06-04 RCSB GD9 "Modify descriptor" 2011-06-04 RCSB #