data_GDK # _chem_comp.id GDK _chem_comp.name "2-(4-methylphenyl)-3-(pyridin-2-ylmethoxy)pyridine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H16 N2 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-09-12 _chem_comp.pdbx_modified_date 2018-10-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 276.332 _chem_comp.one_letter_code ? _chem_comp.three_letter_code GDK _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6HM6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal GDK N1 N1 N 0 1 Y N N 22.872 -42.329 39.868 -2.828 -2.080 0.065 N1 GDK 1 GDK C4 C1 C 0 1 Y N N 20.940 -40.930 38.066 -3.140 0.747 -0.635 C4 GDK 2 GDK C5 C2 C 0 1 Y N N 22.323 -40.939 37.964 -2.039 0.220 0.038 C5 GDK 3 GDK C6 C3 C 0 1 Y N N 22.958 -39.881 37.303 -1.165 1.073 0.709 C6 GDK 4 GDK C7 C4 C 0 1 Y N N 22.213 -38.839 36.750 -1.393 2.434 0.704 C7 GDK 5 GDK C8 C5 C 0 1 Y N N 23.124 -42.054 38.557 -1.798 -1.243 0.041 C8 GDK 6 GDK C10 C6 C 0 1 Y N N 24.530 -44.064 39.792 -1.390 -3.940 0.047 C10 GDK 7 GDK C13 C7 C 0 1 N N N 25.482 -42.574 35.864 1.872 -1.457 -0.029 C13 GDK 8 GDK C15 C8 C 0 1 Y N N 24.391 -41.182 34.039 2.505 0.960 -0.053 C15 GDK 9 GDK C17 C9 C 0 1 Y N N 25.628 -40.721 32.052 4.802 1.588 -0.100 C17 GDK 10 GDK C1 C10 C 0 1 N N N 20.006 -37.724 36.259 -2.732 4.439 0.032 C1 GDK 11 GDK C2 C11 C 0 1 Y N N 20.821 -38.840 36.855 -2.488 2.952 0.034 C2 GDK 12 GDK C3 C12 C 0 1 Y N N 20.188 -39.887 37.516 -3.356 2.110 -0.638 C3 GDK 13 GDK C12 C13 C 0 1 Y N N 24.083 -42.758 37.826 -0.488 -1.732 0.019 C12 GDK 14 GDK C11 C14 C 0 1 Y N N 24.797 -43.790 38.451 -0.283 -3.106 0.021 C11 GDK 15 GDK C9 C15 C 0 1 Y N N 23.565 -43.318 40.471 -2.657 -3.386 0.068 C9 GDK 16 GDK O O1 O 0 1 N N N 24.234 -42.398 36.506 0.567 -0.877 -0.006 O GDK 17 GDK C14 C16 C 0 1 Y N N 25.491 -41.914 34.514 2.908 -0.363 -0.054 C14 GDK 18 GDK N2 N2 N 0 1 Y N N 26.635 -42.043 33.787 4.188 -0.678 -0.077 N2 GDK 19 GDK C18 C17 C 0 1 Y N N 26.693 -41.447 32.578 5.129 0.246 -0.100 C18 GDK 20 GDK C16 C18 C 0 1 Y N N 24.462 -40.588 32.789 3.466 1.958 -0.082 C16 GDK 21 GDK H1 H1 H 0 1 N N N 20.438 -41.738 38.576 -3.820 0.090 -1.156 H1 GDK 22 GDK H2 H2 H 0 1 N N N 24.035 -39.871 37.220 -0.310 0.671 1.232 H2 GDK 23 GDK H3 H3 H 0 1 N N N 22.714 -38.030 36.240 -0.719 3.096 1.227 H3 GDK 24 GDK H4 H4 H 0 1 N N N 25.067 -44.849 40.303 -1.265 -5.012 0.049 H4 GDK 25 GDK H5 H5 H 0 1 N N N 25.674 -43.650 35.740 2.013 -2.070 0.862 H5 GDK 26 GDK H6 H6 H 0 1 N N N 26.273 -42.130 36.487 1.978 -2.079 -0.918 H6 GDK 27 GDK H7 H7 H 0 1 N N N 23.500 -41.083 34.641 1.455 1.211 -0.035 H7 GDK 28 GDK H8 H8 H 0 1 N N N 25.710 -40.265 31.077 5.578 2.340 -0.118 H8 GDK 29 GDK H9 H9 H 0 1 N N N 19.741 -37.976 35.222 -2.226 4.889 -0.822 H9 GDK 30 GDK H10 H10 H 0 1 N N N 19.088 -37.586 36.848 -3.803 4.631 -0.038 H10 GDK 31 GDK H11 H11 H 0 1 N N N 20.593 -36.794 36.272 -2.345 4.872 0.953 H11 GDK 32 GDK H12 H12 H 0 1 N N N 19.112 -39.895 37.605 -4.208 2.519 -1.159 H12 GDK 33 GDK H13 H13 H 0 1 N N N 25.536 -44.359 37.907 0.717 -3.515 0.005 H13 GDK 34 GDK H14 H14 H 0 1 N N N 23.367 -43.539 41.510 -3.521 -4.035 0.089 H14 GDK 35 GDK H15 H15 H 0 1 N N N 27.599 -41.536 31.997 6.168 -0.051 -0.114 H15 GDK 36 GDK H16 H16 H 0 1 N N N 23.624 -40.032 32.396 3.181 3.000 -0.081 H16 GDK 37 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GDK C17 C18 DOUB Y N 1 GDK C17 C16 SING Y N 2 GDK C18 N2 SING Y N 3 GDK C16 C15 DOUB Y N 4 GDK N2 C14 DOUB Y N 5 GDK C15 C14 SING Y N 6 GDK C14 C13 SING N N 7 GDK C13 O SING N N 8 GDK C1 C2 SING N N 9 GDK O C12 SING N N 10 GDK C7 C2 DOUB Y N 11 GDK C7 C6 SING Y N 12 GDK C2 C3 SING Y N 13 GDK C6 C5 DOUB Y N 14 GDK C3 C4 DOUB Y N 15 GDK C12 C11 DOUB Y N 16 GDK C12 C8 SING Y N 17 GDK C5 C4 SING Y N 18 GDK C5 C8 SING N N 19 GDK C11 C10 SING Y N 20 GDK C8 N1 DOUB Y N 21 GDK C10 C9 DOUB Y N 22 GDK N1 C9 SING Y N 23 GDK C4 H1 SING N N 24 GDK C6 H2 SING N N 25 GDK C7 H3 SING N N 26 GDK C10 H4 SING N N 27 GDK C13 H5 SING N N 28 GDK C13 H6 SING N N 29 GDK C15 H7 SING N N 30 GDK C17 H8 SING N N 31 GDK C1 H9 SING N N 32 GDK C1 H10 SING N N 33 GDK C1 H11 SING N N 34 GDK C3 H12 SING N N 35 GDK C11 H13 SING N N 36 GDK C9 H14 SING N N 37 GDK C18 H15 SING N N 38 GDK C16 H16 SING N N 39 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor GDK InChI InChI 1.03 "InChI=1S/C18H16N2O/c1-14-7-9-15(10-8-14)18-17(6-4-12-20-18)21-13-16-5-2-3-11-19-16/h2-12H,13H2,1H3" GDK InChIKey InChI 1.03 GEICNUUKZLWKET-UHFFFAOYSA-N GDK SMILES_CANONICAL CACTVS 3.385 "Cc1ccc(cc1)c2ncccc2OCc3ccccn3" GDK SMILES CACTVS 3.385 "Cc1ccc(cc1)c2ncccc2OCc3ccccn3" GDK SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "Cc1ccc(cc1)c2c(cccn2)OCc3ccccn3" GDK SMILES "OpenEye OEToolkits" 2.0.6 "Cc1ccc(cc1)c2c(cccn2)OCc3ccccn3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GDK "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "2-(4-methylphenyl)-3-(pyridin-2-ylmethoxy)pyridine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site GDK "Create component" 2018-09-12 EBI GDK "Initial release" 2018-10-10 RCSB #