data_H1O # _chem_comp.id H1O _chem_comp.name "2-(1-methylindol-4-yl)-7-(3,4,5-trimethoxyphenyl)-1~{H}-benzimidazole" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H23 N3 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-10-20 _chem_comp.pdbx_modified_date 2021-10-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 413.468 _chem_comp.one_letter_code ? _chem_comp.three_letter_code H1O _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7DBA _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal H1O C01 C1 C 0 1 Y N N 17.520 66.577 48.104 3.694 -2.767 0.769 C01 H1O 1 H1O C02 C2 C 0 1 Y N N 17.034 65.322 47.759 5.025 -2.406 0.714 C02 H1O 2 H1O C03 C3 C 0 1 Y N N 16.927 64.953 46.393 5.383 -1.097 0.410 C03 H1O 3 H1O C04 C4 C 0 1 Y N N 17.305 65.834 45.413 4.379 -0.144 0.159 C04 H1O 4 H1O C05 C5 C 0 1 Y N N 17.801 67.114 45.766 3.024 -0.523 0.217 C05 H1O 5 H1O C06 C6 C 0 1 Y N N 17.905 67.475 47.107 2.696 -1.842 0.519 C06 H1O 6 H1O C08 C7 C 0 1 Y N N 16.578 63.929 44.479 6.390 0.862 -0.032 C08 H1O 7 H1O C09 C8 C 0 1 Y N N 17.085 65.187 44.163 5.072 1.112 -0.120 C09 H1O 8 H1O C10 C9 C 0 1 Y N N 18.222 68.096 44.676 1.962 0.468 -0.044 C10 H1O 9 H1O C12 C10 C 0 1 Y N N 18.364 69.112 42.746 -0.033 1.391 -0.302 C12 H1O 10 H1O C13 C11 C 0 1 Y N N 19.204 69.727 43.638 0.970 2.351 -0.516 C13 H1O 11 H1O C15 C12 C 0 1 Y N N 18.274 69.588 41.412 -1.379 1.755 -0.415 C15 H1O 12 H1O C16 C13 C 0 1 Y N N 19.038 70.680 41.009 -1.712 3.067 -0.732 C16 H1O 13 H1O C17 C14 C 0 1 Y N N 19.895 71.308 41.918 -0.718 4.011 -0.937 C17 H1O 14 H1O C18 C15 C 0 1 Y N N 19.984 70.842 43.225 0.610 3.665 -0.836 C18 H1O 15 H1O C19 C16 C 0 1 Y N N 17.338 68.902 40.419 -2.444 0.747 -0.197 C19 H1O 16 H1O C20 C17 C 0 1 Y N N 16.124 68.393 40.850 -3.503 1.026 0.666 C20 H1O 17 H1O C21 C18 C 0 1 Y N N 15.274 67.771 39.949 -4.496 0.083 0.869 C21 H1O 18 H1O C22 C19 C 0 1 Y N N 15.639 67.658 38.617 -4.439 -1.141 0.211 C22 H1O 19 H1O C23 C20 C 0 1 Y N N 16.854 68.166 38.186 -3.384 -1.421 -0.651 C23 H1O 20 H1O C24 C21 C 0 1 Y N N 17.703 68.789 39.087 -2.392 -0.478 -0.860 C24 H1O 21 H1O C27 C22 C 0 1 N N N 14.057 66.813 41.712 -5.524 1.632 2.353 C27 H1O 22 H1O C28 C23 C 0 1 N N N 14.731 65.639 37.846 -6.546 -2.017 -0.463 C28 H1O 23 H1O C30 C24 C 0 1 N N N 18.593 68.213 36.612 -2.218 -2.838 -2.163 C30 H1O 24 H1O C31 C25 C 0 1 N N N 16.008 62.639 46.495 7.905 -1.081 0.464 C31 H1O 25 H1O N07 N1 N 0 1 Y N N 16.494 63.814 45.793 6.594 -0.452 0.285 N07 H1O 26 H1O N11 N2 N 0 1 Y N N 17.768 68.098 43.432 0.617 0.210 -0.009 N11 H1O 27 H1O N14 N3 N 0 1 Y N N 19.097 69.077 44.829 2.162 1.730 -0.340 N14 H1O 28 H1O O25 O1 O 0 1 N N N 14.782 67.029 37.708 -5.417 -2.066 0.412 O25 H1O 29 H1O O26 O2 O 0 1 N N N 14.047 67.257 40.385 -5.529 0.355 1.711 O26 H1O 30 H1O O29 O3 O 0 1 N N N 17.222 68.052 36.840 -3.330 -2.618 -1.293 O29 H1O 31 H1O H1 H1 H 0 1 N N N 17.600 66.858 49.144 3.428 -3.787 1.006 H1 H1O 32 H1O H2 H2 H 0 1 N N N 16.738 64.627 48.531 5.791 -3.142 0.907 H2 H1O 33 H1O H3 H3 H 0 1 N N N 18.284 68.450 47.376 1.660 -2.142 0.565 H3 H1O 34 H1O H4 H4 H 0 1 N N N 16.298 63.169 43.765 7.171 1.591 -0.187 H4 H1O 35 H1O H5 H5 H 0 1 N N N 17.272 65.588 43.178 4.612 2.060 -0.355 H5 H1O 36 H1O H6 H6 H 0 1 N N N 18.969 71.042 39.994 -2.750 3.352 -0.820 H6 H1O 37 H1O H7 H7 H 0 1 N N N 20.488 72.155 41.605 -0.989 5.027 -1.184 H7 H1O 38 H1O H8 H8 H 0 1 N N N 20.646 71.327 43.927 1.376 4.410 -0.998 H8 H1O 39 H1O H9 H9 H 0 1 N N N 15.840 68.481 41.888 -3.547 1.976 1.178 H9 H1O 40 H1O H10 H10 H 0 1 N N N 18.649 69.187 38.751 -1.573 -0.696 -1.529 H10 H1O 41 H1O H11 H11 H 0 1 N N N 13.062 66.426 41.977 -4.621 1.732 2.955 H11 H1O 42 H1O H12 H12 H 0 1 N N N 14.804 66.013 41.825 -5.547 2.418 1.599 H12 H1O 43 H1O H13 H13 H 0 1 N N N 14.314 67.651 42.377 -6.400 1.719 2.995 H13 H1O 44 H1O H14 H14 H 0 1 N N N 14.039 65.221 37.100 -7.247 -2.807 -0.195 H14 H1O 45 H1O H15 H15 H 0 1 N N N 15.735 65.218 37.691 -7.036 -1.048 -0.369 H15 H1O 46 H1O H16 H16 H 0 1 N N N 14.378 65.384 38.856 -6.215 -2.159 -1.492 H16 H1O 47 H1O H17 H17 H 0 1 N N N 18.801 68.110 35.537 -1.292 -2.769 -1.593 H17 H1O 48 H1O H18 H18 H 0 1 N N N 18.906 69.211 36.952 -2.297 -3.829 -2.610 H18 H1O 49 H1O H19 H19 H 0 1 N N N 19.150 67.445 37.168 -2.218 -2.084 -2.950 H19 H1O 50 H1O H20 H20 H 0 1 N N N 16.047 62.817 47.580 8.207 -0.999 1.508 H20 H1O 51 H1O H21 H21 H 0 1 N N N 14.970 62.435 46.194 7.844 -2.133 0.184 H21 H1O 52 H1O H22 H22 H 0 1 N N N 16.639 61.774 46.243 8.638 -0.579 -0.167 H22 H1O 53 H1O H23 H23 H 0 1 N N N 17.097 67.459 43.057 0.199 -0.644 0.185 H23 H1O 54 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal H1O C30 O29 SING N N 1 H1O O29 C23 SING N N 2 H1O O25 C28 SING N N 3 H1O O25 C22 SING N N 4 H1O C23 C22 DOUB Y N 5 H1O C23 C24 SING Y N 6 H1O C22 C21 SING Y N 7 H1O C24 C19 DOUB Y N 8 H1O C21 O26 SING N N 9 H1O C21 C20 DOUB Y N 10 H1O O26 C27 SING N N 11 H1O C19 C20 SING Y N 12 H1O C19 C15 SING N N 13 H1O C16 C15 DOUB Y N 14 H1O C16 C17 SING Y N 15 H1O C15 C12 SING Y N 16 H1O C17 C18 DOUB Y N 17 H1O C12 N11 SING Y N 18 H1O C12 C13 DOUB Y N 19 H1O C18 C13 SING Y N 20 H1O N11 C10 SING Y N 21 H1O C13 N14 SING Y N 22 H1O C09 C08 DOUB Y N 23 H1O C09 C04 SING Y N 24 H1O C08 N07 SING Y N 25 H1O C10 N14 DOUB Y N 26 H1O C10 C05 SING N N 27 H1O C04 C05 DOUB Y N 28 H1O C04 C03 SING Y N 29 H1O C05 C06 SING Y N 30 H1O N07 C03 SING Y N 31 H1O N07 C31 SING N N 32 H1O C03 C02 DOUB Y N 33 H1O C06 C01 DOUB Y N 34 H1O C02 C01 SING Y N 35 H1O C01 H1 SING N N 36 H1O C02 H2 SING N N 37 H1O C06 H3 SING N N 38 H1O C08 H4 SING N N 39 H1O C09 H5 SING N N 40 H1O C16 H6 SING N N 41 H1O C17 H7 SING N N 42 H1O C18 H8 SING N N 43 H1O C20 H9 SING N N 44 H1O C24 H10 SING N N 45 H1O C27 H11 SING N N 46 H1O C27 H12 SING N N 47 H1O C27 H13 SING N N 48 H1O C28 H14 SING N N 49 H1O C28 H15 SING N N 50 H1O C28 H16 SING N N 51 H1O C30 H17 SING N N 52 H1O C30 H18 SING N N 53 H1O C30 H19 SING N N 54 H1O C31 H20 SING N N 55 H1O C31 H21 SING N N 56 H1O C31 H22 SING N N 57 H1O N11 H23 SING N N 58 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor H1O InChI InChI 1.03 "InChI=1S/C25H23N3O3/c1-28-12-11-17-18(8-6-10-20(17)28)25-26-19-9-5-7-16(23(19)27-25)15-13-21(29-2)24(31-4)22(14-15)30-3/h5-14H,1-4H3,(H,26,27)" H1O InChIKey InChI 1.03 YVHIIGJCOXHSPF-UHFFFAOYSA-N H1O SMILES_CANONICAL CACTVS 3.385 "COc1cc(cc(OC)c1OC)c2cccc3nc([nH]c23)c4cccc5n(C)ccc45" H1O SMILES CACTVS 3.385 "COc1cc(cc(OC)c1OC)c2cccc3nc([nH]c23)c4cccc5n(C)ccc45" H1O SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cn1ccc2c1cccc2c3[nH]c4c(cccc4n3)c5cc(c(c(c5)OC)OC)OC" H1O SMILES "OpenEye OEToolkits" 2.0.7 "Cn1ccc2c1cccc2c3[nH]c4c(cccc4n3)c5cc(c(c(c5)OC)OC)OC" # _pdbx_chem_comp_identifier.comp_id H1O _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-(1-methylindol-4-yl)-7-(3,4,5-trimethoxyphenyl)-1~{H}-benzimidazole" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site H1O "Create component" 2020-10-20 PDBJ H1O "Initial release" 2021-10-20 RCSB ##