data_HCV # _chem_comp.id HCV _chem_comp.name "N-[(5S)-5-amino-5-carboxypentanoyl]-L-homocysteyl-D-valine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H27 N3 O6 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms Delta-L-alpha-aminoadipoyl-L-homocysteinyl-D-valine _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2013-01-24 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 377.456 _chem_comp.one_letter_code ? _chem_comp.three_letter_code HCV _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3ZKU _chem_comp.pdbx_subcomponent_list "UN1 HCS DVA" _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal HCV C8 C8 C 0 1 N N N 12.326 39.150 5.562 -1.265 -0.007 0.042 "C1'" UN1 1 HCV O1 O1 O 0 1 N N N 13.025 39.807 4.792 -1.342 -0.573 1.112 "O1'" UN1 2 HCV O2 O2 O 0 1 N N N 17.301 35.976 4.362 -8.198 0.607 -0.692 O58 UN1 3 HCV C9 C9 C 0 1 N N N 12.928 38.460 6.765 -2.504 0.558 -0.603 C1 UN1 4 HCV C13 C13 C 0 1 N N N 17.180 36.487 5.432 -7.401 1.252 -0.052 C3 UN1 5 HCV C12 C12 C 0 1 N N S 15.870 36.312 6.242 -6.184 0.582 0.530 C4 UN1 6 HCV C11 C11 C 0 1 N N N 15.006 37.388 5.656 -4.973 0.857 -0.364 C5 UN1 7 HCV C10 C10 C 0 1 N N N 13.650 37.173 6.387 -3.715 0.283 0.291 C6 UN1 8 HCV N2 N2 N 0 1 N N N 15.890 36.555 7.685 -6.414 -0.867 0.612 N4 UN1 9 HCV O3 O3 O 0 1 N N N 18.061 37.255 5.941 -7.601 2.566 0.138 "O5'" UN1 10 HCV N1 N1 N 0 1 N N N 11.019 38.940 5.364 -0.070 0.122 -0.567 N HCS 11 HCV C5 C5 C 0 1 N N S 10.107 39.927 4.783 1.135 -0.427 0.060 CA HCS 12 HCV C6 C6 C 0 1 N N N 10.818 41.250 4.534 1.273 -1.906 -0.308 CB HCS 13 HCV C7 C7 C 0 1 N N N 11.131 41.845 5.931 0.108 -2.692 0.297 CG HCS 14 HCV S S S 0 1 N N N 10.621 40.772 7.302 0.270 -4.445 -0.139 SD HCS 15 HCV C4 C4 C 0 1 N N N 9.373 39.324 3.588 2.345 0.327 -0.430 C HCS 16 HCV O O O 0 1 N N N 9.369 39.831 2.434 2.213 1.234 -1.225 O HCS 17 HCV N N N 0 1 N N N 8.591 38.303 3.969 3.572 -0.006 0.015 N DVA 18 HCV C3 C3 C 0 1 N N R 7.333 38.687 4.575 4.748 0.727 -0.462 CA DVA 19 HCV C1 C1 C 0 1 N N N 6.879 40.014 3.923 5.986 -0.164 -0.344 CB DVA 20 HCV C C C 0 1 N N N 6.197 39.814 2.523 7.214 0.601 -0.842 CG1 DVA 21 HCV C2 C2 C 0 1 N N N 5.997 40.827 4.874 6.192 -0.562 1.119 CG2 DVA 22 HCV C14 C14 C 0 1 N N N 7.416 38.778 6.090 4.940 1.966 0.374 C DVA 23 HCV O5 O5 O 0 1 N N N 8.616 38.730 6.683 4.173 2.212 1.275 O DVA 24 HCV O4 O4 O 0 1 N N N 6.363 38.884 6.709 5.963 2.797 0.117 OXT DVA 25 HCV H9 H9 H 0 1 N N N 13.647 39.142 7.242 -2.387 1.634 -0.735 H1C1 UN1 26 HCV H9A H9A H 0 1 N N N 12.123 38.220 7.475 -2.655 0.087 -1.574 H1C2 UN1 27 HCV H12 H12 H 0 1 N N N 15.438 35.324 6.025 -5.995 0.977 1.529 H4 UN1 28 HCV H11 H11 H 0 1 N N N 14.895 37.260 4.569 -5.124 0.386 -1.335 H5C1 UN1 29 HCV H11A H11A H 0 0 N N N 15.417 38.386 5.868 -4.856 1.932 -0.496 H5C2 UN1 30 HCV H10 H10 H 0 1 N N N 13.842 36.603 7.308 -3.832 -0.792 0.424 H6C1 UN1 31 HCV H10A H10A H 0 0 N N N 12.991 36.590 5.726 -3.564 0.755 1.262 H6C2 UN1 32 HCV HN2 HN2 H 0 1 N N N 16.456 35.862 8.132 -7.168 -1.078 1.248 H4N1 UN1 33 HCV HN2A HN2A H 0 0 N N N 16.270 37.462 7.865 -6.591 -1.256 -0.302 H4N2 UN1 34 HCV HO3 HO3 H 0 1 N N N 18.793 37.340 5.341 -8.396 2.951 -0.255 "H5'" UN1 35 HCV HN1 HN1 H 0 1 N N N 10.642 38.053 5.630 -0.007 0.579 -1.421 H HCS 36 HCV H5 H5 H 0 1 N N N 9.337 40.132 5.541 1.059 -0.327 1.143 HCA HCS 37 HCV H6 H6 H 0 1 N N N 11.750 41.082 3.974 1.260 -2.013 -1.392 HB2 HCS 38 HCV H6A H6A H 0 1 N N N 10.167 41.932 3.967 2.214 -2.292 0.084 HB3 HCS 39 HCV H7 H7 H 0 1 N N N 10.605 42.806 6.026 0.120 -2.584 1.382 HG2 HCS 40 HCV H7A H7A H 0 1 N N N 12.216 42.012 6.004 -0.834 -2.306 -0.095 HG3 HCS 41 HCV HS HS H 0 1 N N N 9.750 39.996 6.728 -0.803 -5.004 0.449 HD HCS 42 HCV HN HN H 0 1 N N N 8.857 37.347 3.844 3.678 -0.731 0.650 H DVA 43 HCV H3 H3 H 0 1 N N N 6.579 37.926 4.328 4.602 1.010 -1.504 HA DVA 44 HCV H1 H1 H 0 1 N N N 7.788 40.607 3.745 5.848 -1.061 -0.948 HB DVA 45 HCV H H H 0 1 N N N 5.899 40.792 2.116 7.353 1.498 -0.237 HG11 DVA 46 HCV HA HA H 0 1 N N N 6.907 39.332 1.835 8.097 -0.034 -0.758 HG12 DVA 47 HCV HB HB H 0 1 N N N 5.307 39.178 2.636 7.068 0.884 -1.884 HG13 DVA 48 HCV H2 H2 H 0 1 N N N 6.509 40.944 5.840 6.330 0.335 1.723 HG21 DVA 49 HCV H2A H2A H 0 1 N N N 5.805 41.819 4.438 5.317 -1.107 1.473 HG22 DVA 50 HCV H2B H2B H 0 1 N N N 5.042 40.303 5.027 7.074 -1.197 1.203 HG23 DVA 51 HCV HO4 HO4 H 0 1 N N N 6.545 38.924 7.640 6.045 3.579 0.680 HXT DVA 52 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal HCV C C1 SING N N 1 HCV C H SING N N 2 HCV C HA SING N N 3 HCV C HB SING N N 4 HCV C4 N SING N N 5 HCV N C3 SING N N 6 HCV N HN SING N N 7 HCV O C4 DOUB N N 8 HCV C7 S SING N N 9 HCV S HS SING N N 10 HCV C1 C3 SING N N 11 HCV C1 C2 SING N N 12 HCV C1 H1 SING N N 13 HCV C5 N1 SING N N 14 HCV N1 C8 SING N N 15 HCV N1 HN1 SING N N 16 HCV O1 C8 DOUB N N 17 HCV C2 H2 SING N N 18 HCV C2 H2A SING N N 19 HCV C2 H2B SING N N 20 HCV C12 N2 SING N N 21 HCV N2 HN2 SING N N 22 HCV N2 HN2A SING N N 23 HCV O2 C13 DOUB N N 24 HCV C3 C14 SING N N 25 HCV C3 H3 SING N N 26 HCV C13 O3 SING N N 27 HCV O3 HO3 SING N N 28 HCV C4 C5 SING N N 29 HCV C14 O4 SING N N 30 HCV O4 HO4 SING N N 31 HCV C6 C5 SING N N 32 HCV C5 H5 SING N N 33 HCV C14 O5 DOUB N N 34 HCV C6 C7 SING N N 35 HCV C6 H6 SING N N 36 HCV C6 H6A SING N N 37 HCV C7 H7 SING N N 38 HCV C7 H7A SING N N 39 HCV C8 C9 SING N N 40 HCV C10 C9 SING N N 41 HCV C9 H9 SING N N 42 HCV C9 H9A SING N N 43 HCV C11 C10 SING N N 44 HCV C10 H10 SING N N 45 HCV C10 H10A SING N N 46 HCV C11 C12 SING N N 47 HCV C11 H11 SING N N 48 HCV C11 H11A SING N N 49 HCV C13 C12 SING N N 50 HCV C12 H12 SING N N 51 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor HCV SMILES ACDLabs 12.01 "O=C(NC(C(=O)O)C(C)C)C(NC(=O)CCCC(C(=O)O)N)CCS" HCV InChI InChI 1.03 "InChI=1S/C15H27N3O6S/c1-8(2)12(15(23)24)18-13(20)10(6-7-25)17-11(19)5-3-4-9(16)14(21)22/h8-10,12,25H,3-7,16H2,1-2H3,(H,17,19)(H,18,20)(H,21,22)(H,23,24)/t9-,10-,12+/m0/s1" HCV InChIKey InChI 1.03 WDPVNDRNBJNETA-JBLDHEPKSA-N HCV SMILES_CANONICAL CACTVS 3.370 "CC(C)[C@@H](NC(=O)[C@H](CCS)NC(=O)CCC[C@H](N)C(O)=O)C(O)=O" HCV SMILES CACTVS 3.370 "CC(C)[CH](NC(=O)[CH](CCS)NC(=O)CCC[CH](N)C(O)=O)C(O)=O" HCV SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC(C)[C@H](C(=O)O)NC(=O)[C@H](CCS)NC(=O)CCC[C@@H](C(=O)O)N" HCV SMILES "OpenEye OEToolkits" 1.7.6 "CC(C)C(C(=O)O)NC(=O)C(CCS)NC(=O)CCCC(C(=O)O)N" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier HCV "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(5S)-5-amino-5-carboxypentanoyl]-L-homocysteyl-D-valine" HCV "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S)-2-azanyl-6-[[(2S)-1-[[(2R)-3-methyl-1-oxidanyl-1-oxidanylidene-butan-2-yl]amino]-1-oxidanylidene-4-sulfanyl-butan-2-yl]amino]-6-oxidanylidene-hexanoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site HCV "Create component" 2013-01-24 EBI HCV "Initial release" 2013-02-01 RCSB HCV "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id HCV _pdbx_chem_comp_synonyms.name Delta-L-alpha-aminoadipoyl-L-homocysteinyl-D-valine _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##