data_HWD # _chem_comp.id HWD _chem_comp.name "2-AMINO-3-(2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN-1-YL)-PROPIONIC ACID" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C7 H9 N3 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms WILLARDIINE _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2002-09-20 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 199.164 _chem_comp.one_letter_code ? _chem_comp.three_letter_code HWD _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1MQJ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal HWD N1 N1 N 0 1 Y N N 16.266 1.712 15.430 0.024 -0.490 -0.517 N1 HWD 1 HWD C2 C2 C 0 1 Y N N 16.391 0.409 14.863 -1.061 -0.101 -1.210 C2 HWD 2 HWD O2 O2 O 0 1 N N N 16.468 -0.634 15.544 -2.135 -0.023 -0.647 O2 HWD 3 HWD N3 N3 N 0 1 Y N N 16.421 0.386 13.468 -0.971 0.211 -2.516 N3 HWD 4 HWD C4 C4 C 0 1 Y N N 16.340 1.507 12.614 0.212 0.129 -3.155 C4 HWD 5 HWD O4 O4 O 0 1 N N N 16.381 1.370 11.404 0.293 0.408 -4.338 O4 HWD 6 HWD C5 C5 C 0 1 Y N N 16.211 2.799 13.291 1.361 -0.283 -2.439 C5 HWD 7 HWD C6 C6 C 0 1 Y N N 16.154 2.861 14.643 1.244 -0.586 -1.128 C6 HWD 8 HWD C7 C7 C 0 1 N N N 16.154 1.867 16.893 -0.103 -0.820 0.904 C7 HWD 9 HWD C8 C8 C 0 1 N N S 14.854 1.331 17.490 0.132 0.437 1.742 C8 HWD 10 HWD N8 N8 N 0 1 N N N 13.729 2.301 17.246 1.481 0.956 1.479 N8 HWD 11 HWD C9 C9 C 0 1 N N N 14.948 0.972 18.980 0.001 0.098 3.205 C9 HWD 12 HWD O91 O91 O 0 1 N N N 14.147 1.450 19.743 0.971 -0.256 3.832 O91 HWD 13 HWD O92 O92 O 0 1 N N N 15.938 0.210 19.282 -1.192 0.190 3.811 O92 HWD 14 HWD H3 H3 H 0 1 N N N 16.510 -0.532 13.033 -1.763 0.494 -3.001 H3 HWD 15 HWD H5 H5 H 0 1 N N N 16.154 3.764 12.761 2.319 -0.354 -2.933 H5 HWD 16 HWD H6 H6 H 0 1 N N N 16.015 3.852 15.105 2.110 -0.903 -0.565 H6 HWD 17 HWD H71 1H7 H 0 1 N N N 17.033 1.405 17.400 0.635 -1.577 1.169 H71 HWD 18 HWD H72 2H7 H 0 1 N N N 16.303 2.933 17.182 -1.104 -1.204 1.100 H72 HWD 19 HWD H8 H8 H 0 1 N N N 14.646 0.370 16.963 -0.605 1.194 1.477 H8 HWD 20 HWD H81 1H8 H 0 1 N N N 12.861 1.943 17.644 2.128 0.226 1.737 H81 HWD 21 HWD H82 2H8 H 0 1 N N N 13.628 2.526 16.256 1.558 1.070 0.479 H82 HWD 22 HWD H92O OH92 H 0 0 N N N 15.996 -0.012 20.203 -1.276 -0.026 4.749 H92O HWD 23 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal HWD N1 C2 SING Y N 1 HWD N1 C6 SING Y N 2 HWD N1 C7 SING N N 3 HWD C2 O2 DOUB N N 4 HWD C2 N3 SING Y N 5 HWD N3 C4 SING Y N 6 HWD N3 H3 SING N N 7 HWD C4 O4 DOUB N N 8 HWD C4 C5 SING Y N 9 HWD C5 C6 DOUB Y N 10 HWD C5 H5 SING N N 11 HWD C6 H6 SING N N 12 HWD C7 C8 SING N N 13 HWD C7 H71 SING N N 14 HWD C7 H72 SING N N 15 HWD C8 N8 SING N N 16 HWD C8 C9 SING N N 17 HWD C8 H8 SING N N 18 HWD N8 H81 SING N N 19 HWD N8 H82 SING N N 20 HWD C9 O91 DOUB N N 21 HWD C9 O92 SING N N 22 HWD O92 H92O SING N N 23 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor HWD SMILES ACDLabs 10.04 "O=C(O)C(N)CN1C=CC(=O)NC1=O" HWD SMILES_CANONICAL CACTVS 3.341 "N[C@@H](CN1C=CC(=O)NC1=O)C(O)=O" HWD SMILES CACTVS 3.341 "N[CH](CN1C=CC(=O)NC1=O)C(O)=O" HWD SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C1=CN(C(=O)NC1=O)C[C@@H](C(=O)O)N" HWD SMILES "OpenEye OEToolkits" 1.5.0 "C1=CN(C(=O)NC1=O)CC(C(=O)O)N" HWD InChI InChI 1.03 "InChI=1S/C7H9N3O4/c8-4(6(12)13)3-10-2-1-5(11)9-7(10)14/h1-2,4H,3,8H2,(H,12,13)(H,9,11,14)/t4-/m0/s1" HWD InChIKey InChI 1.03 FACUYWPMDKTVFU-BYPYZUCNSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier HWD "SYSTEMATIC NAME" ACDLabs 10.04 "3-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-L-alanine" HWD "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S)-2-amino-3-(2,4-dioxopyrimidin-1-yl)propanoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site HWD "Create component" 2002-09-20 RCSB HWD "Modify descriptor" 2011-06-04 RCSB HWD "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id HWD _pdbx_chem_comp_synonyms.name WILLARDIINE _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##