data_I3U # _chem_comp.id I3U _chem_comp.name "4-[(5-aminopentyl)(hydroxy)amino]-4-oxobutanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C9 H18 N2 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "N-(3-carboxypropanoyl)-N-hydroxycadaverine" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-01-10 _chem_comp.pdbx_modified_date 2022-07-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 218.250 _chem_comp.one_letter_code ? _chem_comp.three_letter_code I3U _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7TGM _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal I3U C02 C1 C 0 1 N N N 62.090 44.358 -41.356 5.724 -0.662 0.121 C02 I3U 1 I3U C03 C2 C 0 1 N N N 63.156 45.275 -41.997 4.293 -0.626 -0.421 C03 I3U 2 I3U C04 C3 C 0 1 N N N 63.603 44.697 -43.394 3.459 0.354 0.407 C04 I3U 3 I3U C05 C4 C 0 1 N N N 64.554 43.462 -43.257 2.028 0.389 -0.135 C05 I3U 4 I3U C06 C5 C 0 1 N N N 64.907 42.875 -44.637 1.194 1.369 0.693 C06 I3U 5 I3U C09 C6 C 0 1 N N N 63.499 41.071 -45.825 -1.017 0.380 0.425 C09 I3U 6 I3U C11 C7 C 0 1 N N N 63.144 39.566 -45.883 -2.426 0.415 -0.109 C11 I3U 7 I3U C12 C8 C 0 1 N N N 61.983 39.447 -46.866 -3.164 -0.856 0.315 C12 I3U 8 I3U C13 C9 C 0 1 N N N 61.536 37.990 -46.937 -4.573 -0.821 -0.219 C13 I3U 9 I3U N01 N1 N 0 1 N N N 61.433 45.003 -40.216 6.525 -1.602 -0.673 N01 I3U 10 I3U N07 N2 N 0 1 N N N 64.494 41.477 -44.794 -0.176 1.403 0.174 N07 I3U 11 I3U O08 O1 O 0 1 N N N 65.014 40.461 -43.989 -0.616 2.510 -0.591 O08 I3U 12 I3U O10 O2 O 0 1 N N N 62.964 41.832 -46.584 -0.640 -0.568 1.080 O10 I3U 13 I3U O14 O3 O 0 1 N N N 62.282 37.084 -47.193 -4.948 0.124 -0.871 O14 I3U 14 I3U H1 H1 H 0 1 N N N 61.330 44.112 -42.113 6.162 0.334 0.056 H1 I3U 15 I3U H2 H2 H 0 1 N N N 62.576 43.434 -41.011 5.710 -0.985 1.162 H2 I3U 16 I3U H3 H3 H 0 1 N N N 64.030 45.335 -41.332 4.307 -0.303 -1.461 H3 I3U 17 I3U H4 H4 H 0 1 N N N 62.733 46.280 -42.138 3.855 -1.622 -0.355 H4 I3U 18 I3U H5 H5 H 0 1 N N N 64.129 45.487 -43.950 3.445 0.030 1.448 H5 I3U 19 I3U H6 H6 H 0 1 N N N 62.706 44.391 -43.952 3.897 1.349 0.342 H6 I3U 20 I3U H7 H7 H 0 1 N N N 64.054 42.689 -42.656 2.042 0.713 -1.176 H7 I3U 21 I3U H8 H8 H 0 1 N N N 65.480 43.776 -42.753 1.590 -0.607 -0.070 H8 I3U 22 I3U H9 H9 H 0 1 N N N 65.997 42.935 -44.774 1.180 1.045 1.734 H9 I3U 23 I3U H10 H10 H 0 1 N N N 64.407 43.476 -45.411 1.632 2.365 0.627 H10 I3U 24 I3U H11 H11 H 0 1 N N N 62.842 39.206 -44.889 -2.944 1.287 0.291 H11 I3U 25 I3U H12 H12 H 0 1 N N N 64.007 38.983 -46.238 -2.401 0.475 -1.197 H12 I3U 26 I3U H13 H13 H 0 1 N N N 62.308 39.781 -47.862 -2.646 -1.727 -0.085 H13 I3U 27 I3U H14 H14 H 0 1 N N N 61.145 40.073 -46.524 -3.189 -0.916 1.403 H14 I3U 28 I3U H16 H16 H 0 1 N N N 60.752 44.382 -39.828 6.500 -1.361 -1.653 H16 I3U 29 I3U H17 H17 H 0 1 N N N 62.116 45.225 -39.520 7.475 -1.644 -0.335 H17 I3U 30 I3U H19 H19 H 0 1 N N N 65.634 40.831 -43.372 0.057 3.193 -0.718 H19 I3U 31 I3U O1 O4 O 0 1 N Y N 60.128 37.726 -46.687 -5.411 -1.839 0.031 O1 I3U 32 I3U H15 H15 H 0 1 N Y N 59.962 36.794 -46.764 -6.304 -1.772 -0.332 H15 I3U 33 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal I3U O14 C13 DOUB N N 1 I3U C13 C12 SING N N 2 I3U C12 C11 SING N N 3 I3U O10 C09 DOUB N N 4 I3U C11 C09 SING N N 5 I3U C09 N07 SING N N 6 I3U N07 C06 SING N N 7 I3U N07 O08 SING N N 8 I3U C06 C05 SING N N 9 I3U C04 C05 SING N N 10 I3U C04 C03 SING N N 11 I3U C03 C02 SING N N 12 I3U C02 N01 SING N N 13 I3U C02 H1 SING N N 14 I3U C02 H2 SING N N 15 I3U C03 H3 SING N N 16 I3U C03 H4 SING N N 17 I3U C04 H5 SING N N 18 I3U C04 H6 SING N N 19 I3U C05 H7 SING N N 20 I3U C05 H8 SING N N 21 I3U C06 H9 SING N N 22 I3U C06 H10 SING N N 23 I3U C11 H11 SING N N 24 I3U C11 H12 SING N N 25 I3U C12 H13 SING N N 26 I3U C12 H14 SING N N 27 I3U N01 H16 SING N N 28 I3U N01 H17 SING N N 29 I3U O08 H19 SING N N 30 I3U C13 O1 SING N N 31 I3U O1 H15 SING N N 32 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor I3U SMILES ACDLabs 12.01 "NCCCCCN(O)C(=O)CCC(=O)O" I3U InChI InChI 1.03 "InChI=1S/C9H18N2O4/c10-6-2-1-3-7-11(15)8(12)4-5-9(13)14/h15H,1-7,10H2,(H,13,14)" I3U InChIKey InChI 1.03 VUXMGAKZQBQIAH-UHFFFAOYSA-N I3U SMILES_CANONICAL CACTVS 3.385 "NCCCCCN(O)C(=O)CCC(O)=O" I3U SMILES CACTVS 3.385 "NCCCCCN(O)C(=O)CCC(O)=O" I3U SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C(CCN)CCN(C(=O)CCC(=O)O)O" I3U SMILES "OpenEye OEToolkits" 2.0.7 "C(CCN)CCN(C(=O)CCC(=O)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier I3U "SYSTEMATIC NAME" ACDLabs 12.01 "4-[(5-aminopentyl)(hydroxy)amino]-4-oxobutanoic acid" I3U "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "4-[5-azanylpentyl(oxidanyl)amino]-4-oxidanylidene-butanoic acid" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id I3U _pdbx_chem_comp_synonyms.name "N-(3-carboxypropanoyl)-N-hydroxycadaverine" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site I3U "Create component" 2022-01-10 RCSB I3U "Initial release" 2022-07-06 RCSB #