data_I60 # _chem_comp.id I60 _chem_comp.name "[(2~{R},3~{R},4~{S},5~{R},6~{R})-6-[(~{E})-[(3~{a}~{S},7~{R},7~{a}~{S})-7-oxidanyl-4-oxidanylidene-3,3~{a},5,6,7,7~{a}-hexahydro-1~{H}-imidazo[4,5-c]pyridin-2-ylidene]amino]-5-(4-azanylbutanoylamino)-2-(hydroxymethyl)-4-oxidanyl-oxan-3-yl] carbamate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H29 N7 O8" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-06-10 _chem_comp.pdbx_modified_date 2023-05-26 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 459.454 _chem_comp.one_letter_code ? _chem_comp.three_letter_code I60 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7XXM _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal I60 N1 N1 N 0 1 N N N 11.636 -10.004 10.812 4.618 -4.745 0.923 N1 I60 1 I60 C1 C1 C 0 1 N N N 12.605 -11.030 10.390 3.773 -4.231 -0.164 C1 I60 2 I60 C2 C2 C 0 1 N N N 12.640 -12.255 11.285 2.569 -3.497 0.429 C2 I60 3 I60 C3 C3 C 0 1 N N N 12.857 -13.563 10.540 1.689 -2.963 -0.703 C3 I60 4 I60 C4 C4 C 0 1 N N N 11.663 -14.015 9.730 0.503 -2.239 -0.118 C4 I60 5 I60 O1 O1 O 0 1 N N N 10.651 -13.342 9.586 0.375 -2.159 1.085 O1 I60 6 I60 N2 N2 N 0 1 N N N 11.817 -15.181 9.112 -0.414 -1.682 -0.933 N2 I60 7 I60 C5 C5 C 0 1 N N R 10.826 -15.729 8.215 -1.567 -0.979 -0.365 C5 I60 8 I60 C6 C6 C 0 1 N N S 9.856 -16.608 9.008 -2.721 -0.991 -1.372 C6 I60 9 I60 O2 O2 O 0 1 N N N 10.564 -17.644 9.689 -2.291 -0.400 -2.599 O2 I60 10 I60 C7 C7 C 0 1 N N R 8.814 -17.174 8.057 -3.893 -0.187 -0.799 C7 I60 11 I60 O3 O3 O 0 1 N N N 8.064 -16.060 7.505 -4.373 -0.826 0.413 O3 I60 12 I60 C8 C8 C 0 1 N N N 7.169 -15.459 8.315 -5.680 -0.682 0.703 C8 I60 13 I60 N3 N3 N 0 1 N N N 6.739 -14.285 7.803 -6.190 -1.250 1.814 N3 I60 14 I60 O4 O4 O 0 1 N N N 6.820 -15.923 9.378 -6.399 -0.040 -0.036 O4 I60 15 I60 C9 C9 C 0 1 N N R 9.532 -17.866 6.909 -3.418 1.232 -0.477 C9 I60 16 I60 C10 C10 C 0 1 N N N 8.615 -18.370 5.841 -4.567 2.024 0.151 C10 I60 17 I60 O5 O5 O 0 1 N N N 9.474 -19.049 4.950 -4.161 3.380 0.345 O5 I60 18 I60 O6 O6 O 0 1 N N N 10.425 -16.950 6.257 -2.324 1.171 0.440 O6 I60 19 I60 C11 C11 C 0 1 N N R 11.460 -16.463 7.094 -1.183 0.471 -0.059 C11 I60 20 I60 N4 N4 N 0 1 N N N 12.265 -15.540 6.337 -0.117 0.493 0.946 N4 I60 21 I60 C12 C12 C 0 1 N N N 13.558 -15.556 6.135 1.032 1.039 0.666 C12 I60 22 I60 N5 N5 N 0 1 N N N 14.214 -14.567 5.440 2.107 1.105 1.547 N5 I60 23 I60 C13 C13 C 0 1 N N S 15.635 -14.914 5.406 3.283 1.194 0.690 C13 I60 24 I60 C14 C14 C 0 1 N N N 16.470 -14.519 4.216 4.451 1.992 1.200 C14 I60 25 I60 O7 O7 O 0 1 N N N 16.300 -13.421 3.686 4.670 2.171 2.379 O7 I60 26 I60 N6 N6 N 0 1 N N N 17.353 -15.418 3.763 5.241 2.494 0.208 N6 I60 27 I60 C15 C15 C 0 1 N N N 17.814 -16.642 4.437 5.086 2.135 -1.192 C15 I60 28 I60 C16 C16 C 0 1 N N R 16.907 -17.026 5.633 3.641 1.907 -1.641 C16 I60 29 I60 O8 O8 O 0 1 N N N 17.479 -16.530 6.857 3.507 0.582 -2.160 O8 I60 30 I60 C17 C17 C 0 1 N N S 15.500 -16.450 5.466 2.718 2.081 -0.463 C17 I60 31 I60 N7 N7 N 0 1 N N N 14.488 -16.510 6.519 1.347 1.625 -0.550 N7 I60 32 I60 H1 H1 H 0 1 N N N 11.670 -9.232 10.178 4.087 -5.335 1.545 H1 I60 33 I60 H2 H2 H 0 1 N N N 10.716 -10.395 10.812 5.421 -5.234 0.556 H2 I60 34 I60 H4 H4 H 0 1 N N N 12.344 -11.354 9.372 4.352 -3.543 -0.780 H4 I60 35 I60 H5 H5 H 0 1 N N N 13.607 -10.577 10.385 3.426 -5.063 -0.778 H5 I60 36 I60 H6 H6 H 0 1 N N N 13.458 -12.130 12.009 1.991 -4.186 1.045 H6 I60 37 I60 H7 H7 H 0 1 N N N 11.682 -12.318 11.822 2.917 -2.666 1.043 H7 I60 38 I60 H8 H8 H 0 1 N N N 13.092 -14.346 11.276 2.268 -2.274 -1.318 H8 I60 39 I60 H9 H9 H 0 1 N N N 13.710 -13.435 9.857 1.342 -3.794 -1.316 H9 I60 40 I60 H10 H10 H 0 1 N N N 12.655 -15.702 9.275 -0.311 -1.746 -1.895 H10 I60 41 I60 H11 H11 H 0 1 N N N 10.244 -14.898 7.790 -1.880 -1.475 0.554 H11 I60 42 I60 H12 H12 H 0 1 N N N 9.341 -15.972 9.743 -3.036 -2.019 -1.552 H12 I60 43 I60 H13 H13 H 0 1 N N N 11.206 -17.258 10.274 -2.974 -0.375 -3.284 H13 I60 44 I60 H14 H14 H 0 1 N N N 8.156 -17.882 8.583 -4.698 -0.145 -1.532 H14 I60 45 I60 H15 H15 H 0 1 N N N 6.082 -13.728 8.312 -5.616 -1.763 2.404 H15 I60 46 I60 H16 H16 H 0 1 N N N 7.078 -13.973 6.915 -7.132 -1.147 2.023 H16 I60 47 I60 H17 H17 H 0 1 N N N 10.104 -18.714 7.315 -3.096 1.725 -1.394 H17 I60 48 I60 H18 H18 H 0 1 N N N 8.107 -17.536 5.336 -5.433 1.995 -0.510 H18 I60 49 I60 H19 H19 H 0 1 N N N 7.865 -19.056 6.261 -4.830 1.582 1.113 H19 I60 50 I60 H20 H20 H 0 1 N N N 8.967 -19.406 4.231 -4.841 3.942 0.740 H20 I60 51 I60 H21 H21 H 0 1 N N N 12.075 -17.288 7.482 -0.831 0.954 -0.971 H21 I60 52 I60 H22 H22 H 0 1 N N N 13.795 -13.756 5.031 2.079 1.095 2.516 H22 I60 53 I60 H23 H23 H 0 1 N N N 16.127 -14.565 6.326 3.587 0.211 0.331 H23 I60 54 I60 H24 H24 H 0 1 N N N 17.745 -15.236 2.861 5.939 3.123 0.448 H24 I60 55 I60 H25 H25 H 0 1 N N N 17.813 -17.469 3.711 5.514 2.931 -1.801 H25 I60 56 I60 H26 H26 H 0 1 N N N 18.838 -16.480 4.806 5.653 1.223 -1.378 H26 I60 57 I60 H27 H27 H 0 1 N N N 16.834 -18.123 5.674 3.382 2.629 -2.416 H27 I60 58 I60 H28 H28 H 0 1 N N N 16.920 -16.768 7.587 4.074 0.398 -2.921 H28 I60 59 I60 H29 H29 H 0 1 N N N 15.076 -16.808 4.516 2.727 3.125 -0.149 H29 I60 60 I60 H30 H30 H 0 1 N N N 14.471 -17.100 7.326 0.758 1.714 -1.315 H30 I60 61 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal I60 O7 C14 DOUB N N 1 I60 N6 C14 SING N N 2 I60 N6 C15 SING N N 3 I60 C14 C13 SING N N 4 I60 C15 C16 SING N N 5 I60 O5 C10 SING N N 6 I60 C13 N5 SING N N 7 I60 C13 C17 SING N N 8 I60 N5 C12 SING N N 9 I60 C17 C16 SING N N 10 I60 C17 N7 SING N N 11 I60 C16 O8 SING N N 12 I60 C10 C9 SING N N 13 I60 C12 N4 DOUB N N 14 I60 C12 N7 SING N N 15 I60 O6 C9 SING N N 16 I60 O6 C11 SING N N 17 I60 N4 C11 SING N N 18 I60 C9 C7 SING N N 19 I60 C11 C5 SING N N 20 I60 O3 C7 SING N N 21 I60 O3 C8 SING N N 22 I60 N3 C8 SING N N 23 I60 C7 C6 SING N N 24 I60 C5 C6 SING N N 25 I60 C5 N2 SING N N 26 I60 C8 O4 DOUB N N 27 I60 C6 O2 SING N N 28 I60 N2 C4 SING N N 29 I60 O1 C4 DOUB N N 30 I60 C4 C3 SING N N 31 I60 C1 N1 SING N N 32 I60 C1 C2 SING N N 33 I60 C3 C2 SING N N 34 I60 N1 H1 SING N N 35 I60 N1 H2 SING N N 36 I60 C1 H4 SING N N 37 I60 C1 H5 SING N N 38 I60 C2 H6 SING N N 39 I60 C2 H7 SING N N 40 I60 C3 H8 SING N N 41 I60 C3 H9 SING N N 42 I60 N2 H10 SING N N 43 I60 C5 H11 SING N N 44 I60 C6 H12 SING N N 45 I60 O2 H13 SING N N 46 I60 C7 H14 SING N N 47 I60 N3 H15 SING N N 48 I60 N3 H16 SING N N 49 I60 C9 H17 SING N N 50 I60 C10 H18 SING N N 51 I60 C10 H19 SING N N 52 I60 O5 H20 SING N N 53 I60 C11 H21 SING N N 54 I60 N5 H22 SING N N 55 I60 C13 H23 SING N N 56 I60 N6 H24 SING N N 57 I60 C15 H25 SING N N 58 I60 C15 H26 SING N N 59 I60 C16 H27 SING N N 60 I60 O8 H28 SING N N 61 I60 C17 H29 SING N N 62 I60 N7 H30 SING N N 63 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor I60 InChI InChI 1.03 "InChI=1S/C17H29N7O8/c18-3-1-2-8(27)21-11-12(28)13(32-16(19)30)7(5-25)31-15(11)24-17-22-9-6(26)4-20-14(29)10(9)23-17/h6-7,9-13,15,25-26,28H,1-5,18H2,(H2,19,30)(H,20,29)(H,21,27)(H2,22,23,24)/t6-,7-,9-,10+,11-,12+,13+,15-/m1/s1" I60 InChIKey InChI 1.03 UHTCYHBBFSVFGP-JUFPZOJRSA-N I60 SMILES_CANONICAL CACTVS 3.385 "NCCCC(=O)N[C@@H]1[C@H](O)[C@@H](OC(N)=O)[C@@H](CO)O[C@H]1N=C2N[C@@H]3[C@H](O)CNC(=O)[C@H]3N2" I60 SMILES CACTVS 3.385 "NCCCC(=O)N[CH]1[CH](O)[CH](OC(N)=O)[CH](CO)O[CH]1N=C2N[CH]3[CH](O)CNC(=O)[CH]3N2" I60 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C1[C@H]([C@@H]2[C@@H](C(=O)N1)N/C(=N/[C@H]3[C@@H]([C@@H]([C@H]([C@H](O3)CO)OC(=O)N)O)NC(=O)CCCN)/N2)O" I60 SMILES "OpenEye OEToolkits" 2.0.7 "C1C(C2C(C(=O)N1)NC(=NC3C(C(C(C(O3)CO)OC(=O)N)O)NC(=O)CCCN)N2)O" # _pdbx_chem_comp_identifier.comp_id I60 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(2~{R},3~{R},4~{S},5~{R},6~{R})-6-[(~{E})-[(3~{a}~{S},7~{R},7~{a}~{S})-7-oxidanyl-4-oxidanylidene-3,3~{a},5,6,7,7~{a}-hexahydro-1~{H}-imidazo[4,5-c]pyridin-2-ylidene]amino]-5-(4-azanylbutanoylamino)-2-(hydroxymethyl)-4-oxidanyl-oxan-3-yl] carbamate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site I60 "Create component" 2022-06-10 PDBJ I60 "Initial release" 2023-05-31 RCSB #