data_IA # _chem_comp.id IA _chem_comp.name "2'-(3-IODOPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAD _chem_comp.formula "C25 H24 I N6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 535.403 _chem_comp.one_letter_code ? _chem_comp.three_letter_code IA _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 443D _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal IA C C C 0 1 Y N N 15.101 -0.074 12.520 -7.405 -1.175 0.912 C IA 1 IA C1 C1 C 0 1 Y N N 16.242 1.520 14.859 -4.695 -1.393 0.384 C1 IA 2 IA C2 C2 C 0 1 Y N N 14.193 0.753 13.539 -6.745 -2.362 1.176 C2 IA 3 IA C3 C3 C 0 1 Y N N 14.797 1.536 14.700 -5.396 -2.478 0.915 C3 IA 4 IA C4 C4 C 0 1 Y N N 16.608 0.080 12.901 -6.717 -0.096 0.386 C4 IA 5 IA C5 C5 C 0 1 Y N N 17.116 0.833 14.026 -5.364 -0.197 0.126 C5 IA 6 IA C6 C6 C 0 1 Y N N 16.653 2.273 15.946 -3.248 -1.510 0.103 C6 IA 7 IA C7 C7 C 0 1 Y N N 16.692 3.326 17.841 -1.094 -1.035 -0.060 C7 IA 8 IA C8 C8 C 0 1 Y N N 17.964 3.489 17.095 -1.339 -2.339 -0.534 C8 IA 9 IA C9 C9 C 0 1 Y N N 19.141 4.253 17.643 -0.274 -3.113 -1.012 C9 IA 10 IA C10 C10 C 0 1 Y N N 18.912 4.848 18.968 0.990 -2.607 -1.018 C10 IA 11 IA C11 C11 C 0 1 Y N N 17.604 4.667 19.668 1.240 -1.311 -0.549 C11 IA 12 IA C12 C12 C 0 1 Y N N 16.523 3.934 19.119 0.194 -0.528 -0.064 C12 IA 13 IA N1 N1 N 0 1 Y N N 15.915 2.542 17.024 -2.319 -0.533 0.336 N1 IA 14 IA N2 N2 N 0 1 Y N N 17.907 2.771 16.001 -2.662 -2.566 -0.408 N2 IA 15 IA C13 C13 C 0 1 Y N N 17.373 5.179 20.940 2.617 -0.775 -0.563 C13 IA 16 IA C14 C14 C 0 1 Y N N 16.509 5.744 22.881 4.820 -0.632 -0.383 C14 IA 17 IA C15 C15 C 0 1 Y N N 17.730 6.474 22.689 4.289 0.607 -0.785 C15 IA 18 IA C16 C16 C 0 1 Y N N 18.328 7.384 23.764 5.149 1.688 -1.004 C16 IA 19 IA C17 C17 C 0 1 Y N N 17.575 7.470 25.060 6.494 1.536 -0.826 C17 IA 20 IA C18 C18 C 0 1 Y N N 16.247 6.644 25.238 7.024 0.310 -0.427 C18 IA 21 IA C19 C19 C 0 1 Y N N 15.836 5.833 24.072 6.189 -0.774 -0.211 C19 IA 22 IA N3 N3 N 0 1 Y N N 16.430 4.927 21.793 3.744 -1.488 -0.249 N3 IA 23 IA N4 N4 N 0 1 Y N N 18.161 6.204 21.464 2.944 0.455 -0.877 N4 IA 24 IA N6 N6 N 0 1 N N N 15.503 6.601 26.516 8.403 0.173 -0.250 N6 IA 25 IA N7 N7 N 1 1 N N N 14.129 6.323 29.033 10.752 1.136 1.119 N7 IA 26 IA C20 C20 C 0 1 N N N 14.028 6.136 26.501 8.623 -0.072 1.181 C20 IA 27 IA C21 C21 C 0 1 N N N 13.533 6.919 27.737 10.123 -0.146 1.467 C21 IA 28 IA C22 C22 C 0 1 N N N 15.636 6.604 28.899 10.507 1.428 -0.300 C22 IA 29 IA C23 C23 C 0 1 N N N 15.913 5.687 27.696 9.000 1.478 -0.558 C23 IA 30 IA C24 C24 C 0 1 N N N 13.457 6.922 30.289 12.198 1.054 1.360 C24 IA 31 IA I I I 0 1 N N N 17.729 -0.985 11.650 -7.726 1.697 -0.009 I IA 32 IA H H H 0 1 N N N 14.736 -0.671 11.667 -8.462 -1.090 1.118 H IA 33 IA H2 H2 H 0 1 N N N 13.095 0.784 13.435 -7.289 -3.201 1.586 H2 IA 34 IA H3 H3 H 0 1 N N N 14.191 2.110 15.421 -4.882 -3.405 1.120 H3 IA 35 IA H5 H5 H 0 1 N N N 18.194 0.884 14.253 -4.828 0.646 -0.285 H5 IA 36 IA H9 H9 H 0 1 N N N 20.101 4.368 17.112 -0.456 -4.114 -1.376 H9 IA 37 IA H10 H10 H 0 1 N N N 19.722 5.430 19.437 1.807 -3.209 -1.389 H10 IA 38 IA H12 H12 H 0 1 N N N 15.573 3.839 19.672 0.387 0.469 0.303 H12 IA 39 IA HN1 HN1 H 0 1 N N N 14.961 2.218 17.188 -2.488 0.346 0.710 HN1 IA 40 IA H16 H16 H 0 1 N N N 19.260 7.952 23.611 4.749 2.642 -1.313 H16 IA 41 IA H17 H17 H 0 1 N N N 17.983 8.117 25.854 7.154 2.374 -0.996 H17 IA 42 IA H19 H19 H 0 1 N N N 14.918 5.221 24.093 6.602 -1.725 0.092 H19 IA 43 IA HN3 HN3 H 0 1 N N N 15.733 4.198 21.632 3.780 -2.420 0.018 HN3 IA 44 IA HN7 HN7 H 0 1 N N N 13.962 5.323 29.150 10.356 1.870 1.687 HN7 IA 45 IA H201 1H20 H 0 0 N N N 13.465 6.296 25.552 8.183 0.740 1.759 H201 IA 46 IA H202 2H20 H 0 0 N N N 13.853 5.034 26.506 8.152 -1.014 1.463 H202 IA 47 IA H211 1H21 H 0 0 N N N 12.419 6.967 27.777 10.568 -0.942 0.869 H211 IA 48 IA H212 2H21 H 0 0 N N N 13.744 8.010 27.647 10.282 -0.354 2.525 H212 IA 49 IA H221 1H22 H 0 0 N N N 15.939 7.671 28.796 10.951 2.391 -0.555 H221 IA 50 IA H222 2H22 H 0 0 N N N 16.259 6.440 29.808 10.955 0.648 -0.915 H222 IA 51 IA H231 1H23 H 0 0 N N N 15.407 4.693 27.727 8.549 2.242 0.075 H231 IA 52 IA H232 2H23 H 0 0 N N N 16.946 5.271 27.640 8.819 1.722 -1.605 H232 IA 53 IA H241 1H24 H 0 0 N N N 13.886 6.492 31.223 12.664 2.005 1.101 H241 IA 54 IA H242 2H24 H 0 0 N N N 13.509 8.035 30.289 12.379 0.836 2.413 H242 IA 55 IA H243 3H24 H 0 0 N N N 12.348 6.802 30.256 12.625 0.261 0.746 H243 IA 56 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal IA C C2 DOUB Y N 1 IA C C4 SING Y N 2 IA C H SING N N 3 IA C1 C3 DOUB Y N 4 IA C1 C5 SING Y N 5 IA C1 C6 SING Y N 6 IA C2 C3 SING Y N 7 IA C2 H2 SING N N 8 IA C3 H3 SING N N 9 IA C4 C5 DOUB Y N 10 IA C4 I SING N N 11 IA C5 H5 SING N N 12 IA C6 N1 SING Y N 13 IA C6 N2 DOUB Y N 14 IA C7 C8 DOUB Y N 15 IA C7 C12 SING Y N 16 IA C7 N1 SING Y N 17 IA C8 C9 SING Y N 18 IA C8 N2 SING Y N 19 IA C9 C10 DOUB Y N 20 IA C9 H9 SING N N 21 IA C10 C11 SING Y N 22 IA C10 H10 SING N N 23 IA C11 C12 DOUB Y N 24 IA C11 C13 SING Y N 25 IA C12 H12 SING N N 26 IA N1 HN1 SING N N 27 IA C13 N3 SING Y N 28 IA C13 N4 DOUB Y N 29 IA C14 C15 DOUB Y N 30 IA C14 C19 SING Y N 31 IA C14 N3 SING Y N 32 IA C15 C16 SING Y N 33 IA C15 N4 SING Y N 34 IA C16 C17 DOUB Y N 35 IA C16 H16 SING N N 36 IA C17 C18 SING Y N 37 IA C17 H17 SING N N 38 IA C18 C19 DOUB Y N 39 IA C18 N6 SING N N 40 IA C19 H19 SING N N 41 IA N3 HN3 SING N N 42 IA N6 C20 SING N N 43 IA N6 C23 SING N N 44 IA N7 C21 SING N N 45 IA N7 C22 SING N N 46 IA N7 C24 SING N N 47 IA N7 HN7 SING N N 48 IA C20 C21 SING N N 49 IA C20 H201 SING N N 50 IA C20 H202 SING N N 51 IA C21 H211 SING N N 52 IA C21 H212 SING N N 53 IA C22 C23 SING N N 54 IA C22 H221 SING N N 55 IA C22 H222 SING N N 56 IA C23 H231 SING N N 57 IA C23 H232 SING N N 58 IA C24 H241 SING N N 59 IA C24 H242 SING N N 60 IA C24 H243 SING N N 61 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor IA SMILES ACDLabs 10.04 "Ic1cccc(c1)c3nc2ccc(cc2n3)c6nc4c(cc(cc4)N5CC[NH+](CC5)C)n6" IA SMILES_CANONICAL CACTVS 3.341 "C[NH+]1CCN(CC1)c2ccc3nc([nH]c3c2)c4ccc5nc([nH]c5c4)c6cccc(I)c6" IA SMILES CACTVS 3.341 "C[NH+]1CCN(CC1)c2ccc3nc([nH]c3c2)c4ccc5nc([nH]c5c4)c6cccc(I)c6" IA SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C[NH+]1CCN(CC1)c2ccc3c(c2)[nH]c(n3)c4ccc5c(c4)[nH]c(n5)c6cccc(c6)I" IA SMILES "OpenEye OEToolkits" 1.5.0 "C[NH+]1CCN(CC1)c2ccc3c(c2)[nH]c(n3)c4ccc5c(c4)[nH]c(n5)c6cccc(c6)I" IA InChI InChI 1.03 "InChI=1S/C25H23IN6/c1-31-9-11-32(12-10-31)19-6-8-21-23(15-19)30-25(28-21)17-5-7-20-22(14-17)29-24(27-20)16-3-2-4-18(26)13-16/h2-8,13-15H,9-12H2,1H3,(H,27,29)(H,28,30)/p+1" IA InChIKey InChI 1.03 ZEXOKHKEQNNOBG-UHFFFAOYSA-O # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier IA "SYSTEMATIC NAME" ACDLabs 10.04 "4-[2'-(3-iodophenyl)-1H,3'H-2,5'-bibenzimidazol-6-yl]-1-methylpiperazin-1-ium" IA "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "2-(3-iodophenyl)-6-[6-(4-methylpiperazin-4-ium-1-yl)-1H-benzimidazol-2-yl]-1H-benzimidazole" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site IA "Create component" 1999-07-08 EBI IA "Modify aromatic_flag" 2011-06-04 RCSB IA "Modify descriptor" 2011-06-04 RCSB #