data_IF7 # _chem_comp.id IF7 _chem_comp.name "(3S,4S,5R)-5-(hydroxymethyl)-3,4-bis(oxidanyl)piperidin-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C6 H11 N O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "ISO-GALACTO-FAGOMINE LACTAM" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-03-17 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 161.156 _chem_comp.one_letter_code ? _chem_comp.three_letter_code IF7 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4UFJ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal IF7 O O O 0 1 N N N 75.928 90.855 19.724 -2.638 -1.259 -0.132 O IF7 1 IF7 C2 C2 C 0 1 N N N 76.986 90.292 19.427 -1.505 -0.826 -0.117 C2 IF7 2 IF7 C3 C3 C 0 1 N N S 78.082 90.315 20.484 -1.260 0.544 -0.681 C3 IF7 3 IF7 O3 O3 O 0 1 N N N 77.527 90.109 21.773 -2.303 1.425 -0.258 O3 IF7 4 IF7 C4 C4 C 0 1 N N S 79.166 89.279 20.201 0.087 1.077 -0.188 C4 IF7 5 IF7 O2 O2 O 0 1 N N N 78.683 87.981 20.531 0.001 1.390 1.203 O2 IF7 6 IF7 C5 C5 C 0 1 N N R 79.599 89.338 18.736 1.148 -0.008 -0.409 C5 IF7 7 IF7 C6 C6 C 0 1 N N N 80.710 88.355 18.433 2.534 0.558 -0.095 C6 IF7 8 IF7 O1 O1 O 0 1 N N N 81.202 88.540 17.121 3.530 -0.417 -0.412 O1 IF7 9 IF7 C1 C1 C 0 1 N N N 78.403 89.037 17.822 0.850 -1.181 0.526 C1 IF7 10 IF7 N N N 0 1 N N N 77.176 89.729 18.241 -0.544 -1.590 0.405 N IF7 11 IF7 H3 H3 H 0 1 N N N 78.555 91.308 20.452 -1.251 0.490 -1.770 H3 IF7 12 IF7 H H H 0 1 N N N 76.426 89.779 17.581 -0.788 -2.474 0.722 H IF7 13 IF7 HA HA H 0 1 N N N 76.592 90.273 21.745 -3.187 1.153 -0.541 HA IF7 14 IF7 H4 H4 H 0 1 N N N 80.039 89.516 20.826 0.355 1.972 -0.750 H4 IF7 15 IF7 H2 H2 H 0 1 N N N 79.359 87.337 20.354 -0.664 2.060 1.415 H2 IF7 16 IF7 H5 H5 H 0 1 N N N 79.957 90.355 18.518 1.116 -0.346 -1.445 H5 IF7 17 IF7 H61C H61C H 0 0 N N N 81.530 88.506 19.150 2.703 1.456 -0.690 H61C IF7 18 IF7 H62C H62C H 0 0 N N N 80.321 87.331 18.531 2.594 0.807 0.964 H62C IF7 19 IF7 H11C H11C H 0 0 N N N 78.654 89.355 16.799 1.497 -2.020 0.269 H11C IF7 20 IF7 H12C H12C H 0 0 N N N 78.216 87.953 17.833 1.045 -0.881 1.555 H12C IF7 21 IF7 H1 H1 H 0 1 N N N 81.897 87.915 16.952 4.435 -0.126 -0.238 H1 IF7 22 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal IF7 O C2 DOUB N N 1 IF7 C2 C3 SING N N 2 IF7 C2 N SING N N 3 IF7 C3 O3 SING N N 4 IF7 C3 C4 SING N N 5 IF7 C4 O2 SING N N 6 IF7 C4 C5 SING N N 7 IF7 C5 C6 SING N N 8 IF7 C5 C1 SING N N 9 IF7 C6 O1 SING N N 10 IF7 C1 N SING N N 11 IF7 C3 H3 SING N N 12 IF7 N H SING N N 13 IF7 O3 HA SING N N 14 IF7 C4 H4 SING N N 15 IF7 O2 H2 SING N N 16 IF7 C5 H5 SING N N 17 IF7 C6 H61C SING N N 18 IF7 C6 H62C SING N N 19 IF7 C1 H11C SING N N 20 IF7 C1 H12C SING N N 21 IF7 O1 H1 SING N N 22 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor IF7 InChI InChI 1.03 "InChI=1S/C6H11NO4/c8-2-3-1-7-6(11)5(10)4(3)9/h3-5,8-10H,1-2H2,(H,7,11)/t3-,4+,5+/m1/s1" IF7 InChIKey InChI 1.03 ARBXEMIAJIJEQI-WISUUJSJSA-N IF7 SMILES_CANONICAL CACTVS 3.385 "OC[C@H]1CNC(=O)[C@@H](O)[C@H]1O" IF7 SMILES CACTVS 3.385 "OC[CH]1CNC(=O)[CH](O)[CH]1O" IF7 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C1[C@@H]([C@@H]([C@@H](C(=O)N1)O)O)CO" IF7 SMILES "OpenEye OEToolkits" 1.7.6 "C1C(C(C(C(=O)N1)O)O)CO" # _pdbx_chem_comp_identifier.comp_id IF7 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 1.7.6 _pdbx_chem_comp_identifier.identifier "(3S,4S,5R)-5-(hydroxymethyl)-3,4-bis(oxidanyl)piperidin-2-one" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site IF7 "Create component" 2015-03-17 EBI IF7 "Initial release" 2015-03-25 RCSB IF7 "Other modification" 2016-11-01 EBI IF7 "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id IF7 _pdbx_chem_comp_synonyms.name "ISO-GALACTO-FAGOMINE LACTAM" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##