data_IPE # _chem_comp.id IPE _chem_comp.name "3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C5 H12 O7 P2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "ISOPENTENYL PYROPHOSPHATE" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2005-03-16 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 246.092 _chem_comp.one_letter_code ? _chem_comp.three_letter_code IPE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1X07 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal IPE C1 C1 C 0 1 N N N 20.688 17.321 23.316 2.133 -0.035 -0.129 C1 IPE 1 IPE O1 O1 O 0 1 N N N 19.531 17.808 22.613 1.008 -0.127 -1.006 O1 IPE 2 IPE C2 C2 C 0 1 N N N 21.997 18.075 23.100 3.417 -0.301 -0.917 C2 IPE 3 IPE C3 C3 C 0 1 N N N 23.176 17.763 23.686 4.603 -0.203 0.007 C3 IPE 4 IPE C4 C4 C 0 1 N N N 23.295 16.572 24.663 5.091 -1.284 0.563 C4 IPE 5 IPE C5 C5 C 0 1 N N N 24.390 18.618 23.359 5.228 1.139 0.292 C5 IPE 6 IPE PA PA P 0 1 N N R 19.588 18.525 21.133 -0.301 0.162 -0.115 PA IPE 7 IPE O1A O1A O 0 1 N N N 20.196 19.918 21.331 -0.330 -0.767 1.037 O1A IPE 8 IPE O2A O2A O 0 1 N N N 20.330 17.455 20.255 -0.261 1.680 0.421 O2A IPE 9 IPE O3A O3A O 0 1 N N N 18.298 18.979 20.415 -1.620 -0.055 -1.012 O3A IPE 10 IPE PB PB P 0 1 N N N 17.507 18.142 19.358 -2.865 -0.147 0.004 PB IPE 11 IPE O1B O1B O 0 1 N N N 16.091 18.012 19.496 -3.299 1.336 0.457 O1B IPE 12 IPE O2B O2B O 0 1 N N N 18.162 16.790 19.061 -2.472 -0.931 1.196 O2B IPE 13 IPE O3B O3B O 0 1 N N N 17.509 18.873 17.985 -4.104 -0.868 -0.728 O3B IPE 14 IPE H11 1H1 H 0 1 N N N 20.838 16.241 23.083 2.035 -0.773 0.667 H11 IPE 15 IPE H12 2H1 H 0 1 N N N 20.465 17.267 24.407 2.174 0.964 0.305 H12 IPE 16 IPE H21 1H2 H 0 1 N N N 21.794 19.146 23.336 3.515 0.438 -1.713 H21 IPE 17 IPE H22 2H2 H 0 1 N N N 22.180 18.094 22.000 3.376 -1.299 -1.352 H22 IPE 18 IPE H41 1H4 H 0 1 N N N 24.256 16.318 25.141 5.942 -1.214 1.225 H41 IPE 19 IPE H42 2H4 H 0 1 N N N 22.414 15.952 24.900 4.644 -2.245 0.358 H42 IPE 20 IPE H51 1H5 H 0 1 N N N 24.150 19.686 23.570 6.066 1.011 0.977 H51 IPE 21 IPE H52 2H5 H 0 1 N N N 25.362 18.361 23.842 5.583 1.580 -0.639 H52 IPE 22 IPE H53 3H5 H 0 1 N N N 24.529 18.645 22.253 4.486 1.796 0.746 H53 IPE 23 IPE H2A H2A H 0 1 N N N 20.363 17.869 19.401 -0.243 2.251 -0.358 H2A IPE 24 IPE H1B H1B H 0 1 N N N 15.610 17.503 18.854 -3.547 1.813 -0.347 H1B IPE 25 IPE H3B H3B H 0 1 N N N 17.028 18.364 17.343 -4.827 -0.903 -0.087 H3B IPE 26 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal IPE C1 O1 SING N N 1 IPE C1 C2 SING N N 2 IPE C1 H11 SING N N 3 IPE C1 H12 SING N N 4 IPE O1 PA SING N N 5 IPE C2 C3 SING N N 6 IPE C2 H21 SING N N 7 IPE C2 H22 SING N N 8 IPE C3 C4 DOUB N N 9 IPE C3 C5 SING N N 10 IPE C4 H41 SING N N 11 IPE C4 H42 SING N N 12 IPE C5 H51 SING N N 13 IPE C5 H52 SING N N 14 IPE C5 H53 SING N N 15 IPE PA O1A DOUB N N 16 IPE PA O2A SING N N 17 IPE PA O3A SING N N 18 IPE O2A H2A SING N N 19 IPE O3A PB SING N N 20 IPE PB O1B SING N N 21 IPE PB O2B DOUB N N 22 IPE PB O3B SING N N 23 IPE O1B H1B SING N N 24 IPE O3B H3B SING N N 25 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor IPE SMILES ACDLabs 10.04 "O=P(OP(=O)(O)O)(OCC\C(=C)C)O" IPE SMILES_CANONICAL CACTVS 3.341 "CC(=C)CCO[P@](O)(=O)O[P](O)(O)=O" IPE SMILES CACTVS 3.341 "CC(=C)CCO[P](O)(=O)O[P](O)(O)=O" IPE SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC(=C)CCO[P@@](=O)(O)OP(=O)(O)O" IPE SMILES "OpenEye OEToolkits" 1.5.0 "CC(=C)CCOP(=O)(O)OP(=O)(O)O" IPE InChI InChI 1.03 "InChI=1S/C5H12O7P2/c1-5(2)3-4-11-14(9,10)12-13(6,7)8/h1,3-4H2,2H3,(H,9,10)(H2,6,7,8)" IPE InChIKey InChI 1.03 NUHSROFQTUXZQQ-UHFFFAOYSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier IPE "SYSTEMATIC NAME" ACDLabs 10.04 "3-methylbut-3-en-1-yl trihydrogen diphosphate" IPE "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "3-methylbut-3-enyl phosphono hydrogen phosphate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site IPE "Create component" 2005-03-16 RCSB IPE "Modify descriptor" 2011-06-04 RCSB IPE "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id IPE _pdbx_chem_comp_synonyms.name "ISOPENTENYL PYROPHOSPHATE" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##