data_IVB # _chem_comp.id IVB _chem_comp.name nalfurafine _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H32 N2 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "~{N}-[(4~{R},4~{a}~{S},7~{R},7~{a}~{R},12~{b}~{S})-3-(cyclopropylmethyl)-4~{a},9-bis(oxidanyl)-1,2,4,5,6,7,7~{a},13-octahydro-4,12-methanobenzofuro[3,2-e]isoquinolin-7-yl]-3-(furan-3-yl)-~{N}-methyl-propanamide" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-07-19 _chem_comp.pdbx_modified_date 2023-09-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 476.564 _chem_comp.one_letter_code ? _chem_comp.three_letter_code IVB _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7YIT _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal IVB C10 C1 C 0 1 N N R 15.762 18.192 -5.553 3.449 0.807 1.160 C10 IVB 1 IVB C13 C2 C 0 1 Y N N 15.560 20.735 -7.035 1.790 -1.127 0.058 C13 IVB 2 IVB C15 C3 C 0 1 N N R 16.211 19.457 -10.035 -0.856 0.284 0.712 C15 IVB 3 IVB C17 C4 C 0 1 N N N 13.573 19.186 -5.278 3.776 0.461 -1.231 C17 IVB 4 IVB C20 C5 C 0 1 Y N N 15.321 21.786 -7.953 0.790 -1.893 -0.526 C20 IVB 5 IVB C21 C6 C 0 1 N N N 14.427 17.802 -3.408 5.653 1.039 0.182 C21 IVB 6 IVB C22 C7 C 0 1 N N N 14.846 16.408 -3.021 6.418 1.681 -0.977 C22 IVB 7 IVB C24 C8 C 0 1 N N N 15.327 16.152 -1.581 7.270 0.763 -1.856 C24 IVB 8 IVB C26 C9 C 0 1 Y N N 15.779 23.117 -7.639 0.868 -3.283 -0.391 C26 IVB 9 IVB C28 C10 C 0 1 N N N 16.977 19.796 -12.477 -2.328 2.180 -0.113 C28 IVB 10 IVB C08 C11 C 0 1 N N S 14.953 19.422 -7.576 1.497 0.319 -0.263 C08 IVB 11 IVB C09 C12 C 0 1 N N S 15.645 18.138 -7.215 1.972 1.126 0.931 C09 IVB 12 IVB C11 C13 C 0 1 N N R 14.902 19.775 -9.109 0.004 0.251 -0.535 C11 IVB 13 IVB C12 C14 C 0 1 N N N 13.549 19.192 -6.807 2.291 0.727 -1.505 C12 IVB 14 IVB C14 C15 C 0 1 N N N 16.959 17.911 -7.982 1.136 0.783 2.159 C14 IVB 15 IVB C16 C16 C 0 1 N N N 16.389 19.500 -4.960 3.735 -0.644 1.511 C16 IVB 16 IVB C18 C17 C 0 1 N N N 16.891 18.146 -9.524 -0.320 1.125 1.848 C18 IVB 17 IVB C19 C18 C 0 1 Y N N 16.244 20.836 -5.801 2.822 -1.609 0.827 C19 IVB 18 IVB C23 C19 C 0 1 N N N 16.335 16.207 -2.710 7.944 1.727 -0.877 C23 IVB 19 IVB C25 C20 C 0 1 Y N N 16.687 22.168 -5.509 2.893 -2.986 0.947 C25 IVB 20 IVB C27 C21 C 0 1 Y N N 16.477 23.260 -6.388 1.938 -3.789 0.344 C27 IVB 21 IVB C29 C22 C 0 1 N N N 14.595 18.970 -12.157 -3.259 -0.005 0.430 C29 IVB 22 IVB C30 C23 C 0 1 N N N 13.330 18.446 -11.481 -4.539 0.491 0.075 C30 IVB 23 IVB C31 C24 C 0 1 N N N 13.204 17.088 -11.597 -5.622 -0.313 0.159 C31 IVB 24 IVB C32 C25 C 0 1 Y N N 12.255 16.008 -11.173 -6.948 0.200 -0.208 C32 IVB 25 IVB C33 C26 C 0 1 Y N N 11.622 15.789 -9.875 -8.225 -0.530 -0.177 C33 IVB 26 IVB C34 C27 C 0 1 Y N N 11.851 14.910 -11.938 -7.255 1.459 -0.646 C34 IVB 27 IVB C35 C28 C 0 1 Y N N 10.858 14.634 -9.946 -9.158 0.339 -0.595 C35 IVB 28 IVB N06 N1 N 0 1 N N N 14.378 18.021 -4.905 4.209 1.196 -0.037 N06 IVB 29 IVB N07 N2 N 0 1 N N N 15.880 19.382 -11.562 -2.179 0.796 0.345 N07 IVB 30 IVB O01 O1 O 0 1 N N N 14.628 21.201 -9.054 -0.131 -1.091 -1.104 O01 IVB 31 IVB O02 O2 O 0 1 N N N 14.724 17.145 -7.733 1.828 2.519 0.648 O02 IVB 32 IVB O03 O3 O 0 1 N N N 15.590 24.204 -8.507 -0.059 -4.104 -0.953 O03 IVB 33 IVB O04 O4 O 0 1 N N N 14.497 18.937 -13.390 -3.136 -1.155 0.811 O04 IVB 34 IVB O05 O5 O 0 1 Y N N 10.999 14.103 -11.206 -8.573 1.516 -0.871 O05 IVB 35 IVB H1 H1 H 0 1 N N N 16.394 17.344 -5.249 3.790 1.427 1.988 H1 IVB 36 IVB H2 H2 H 0 1 N N N 16.920 20.284 -9.885 -0.978 -0.738 1.071 H2 IVB 37 IVB H3 H3 H 0 1 N N N 14.033 20.110 -4.897 3.929 -0.606 -1.073 H3 IVB 38 IVB H4 H4 H 0 1 N N N 12.553 19.093 -4.878 4.364 0.787 -2.089 H4 IVB 39 IVB H5 H5 H 0 1 N N N 15.144 18.515 -2.975 5.899 -0.021 0.237 H5 IVB 40 IVB H6 H6 H 0 1 N N N 13.426 17.992 -2.995 5.933 1.526 1.116 H6 IVB 41 IVB H7 H7 H 0 1 N N N 14.332 15.574 -3.521 5.919 2.521 -1.461 H7 IVB 42 IVB H8 H8 H 0 1 N N N 15.290 16.962 -0.838 7.286 -0.298 -1.608 H8 IVB 43 IVB H9 H9 H 0 1 N N N 15.104 15.193 -1.090 7.332 0.999 -2.918 H9 IVB 44 IVB H10 H10 H 0 1 N N N 17.863 20.072 -11.887 -2.515 2.828 0.743 H10 IVB 45 IVB H11 H11 H 0 1 N N N 17.229 18.962 -13.148 -1.413 2.496 -0.615 H11 IVB 46 IVB H12 H12 H 0 1 N N N 16.650 20.660 -13.074 -3.165 2.244 -0.808 H12 IVB 47 IVB H13 H13 H 0 1 N N N 14.045 19.248 -9.555 -0.311 1.015 -1.247 H13 IVB 48 IVB H14 H14 H 0 1 N N N 12.866 19.994 -7.122 2.138 1.788 -1.708 H14 IVB 49 IVB H15 H15 H 0 1 N N N 13.150 18.220 -7.134 1.963 0.138 -2.362 H15 IVB 50 IVB H16 H16 H 0 1 N N N 17.274 16.871 -7.812 1.226 -0.280 2.382 H16 IVB 51 IVB H17 H17 H 0 1 N N N 17.714 18.595 -7.569 1.478 1.369 3.013 H17 IVB 52 IVB H18 H18 H 0 1 N N N 17.464 19.315 -4.821 4.762 -0.875 1.231 H18 IVB 53 IVB H19 H19 H 0 1 N N N 15.918 19.675 -3.982 3.630 -0.770 2.589 H19 IVB 54 IVB H20 H20 H 0 1 N N N 16.340 17.300 -9.960 -0.389 2.178 1.574 H20 IVB 55 IVB H21 H21 H 0 1 N N N 17.924 18.144 -9.901 -0.925 0.949 2.737 H21 IVB 56 IVB H22 H22 H 0 1 N N N 16.844 15.288 -3.036 8.449 2.597 -1.296 H22 IVB 57 IVB H23 H23 H 0 1 N N N 17.030 17.057 -2.784 8.403 1.300 0.014 H23 IVB 58 IVB H24 H24 H 0 1 N N N 17.204 22.347 -4.578 3.695 -3.437 1.514 H24 IVB 59 IVB H25 H25 H 0 1 N N N 16.854 24.233 -6.110 2.027 -4.860 0.450 H25 IVB 60 IVB H27 H27 H 0 1 N N N 12.616 19.075 -10.970 -4.649 1.510 -0.263 H27 IVB 61 IVB H28 H28 H 0 1 N N N 14.029 16.674 -12.158 -5.513 -1.333 0.497 H28 IVB 62 IVB H30 H30 H 0 1 N N N 11.731 16.421 -9.006 -8.380 -1.556 0.122 H30 IVB 63 IVB H31 H31 H 0 1 N N N 12.160 14.719 -12.955 -6.554 2.267 -0.788 H31 IVB 64 IVB H32 H32 H 0 1 N N N 10.256 14.223 -9.149 -10.212 0.127 -0.692 H32 IVB 65 IVB H34 H34 H 0 1 N N N 13.885 17.232 -7.296 2.113 3.098 1.368 H34 IVB 66 IVB H35 H35 H 0 1 N N N 15.961 24.988 -8.119 0.159 -4.386 -1.852 H35 IVB 67 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal IVB O04 C29 DOUB N N 1 IVB C28 N07 SING N N 2 IVB C29 N07 SING N N 3 IVB C29 C30 SING N N 4 IVB C34 O05 SING Y N 5 IVB C34 C32 DOUB Y N 6 IVB C31 C30 DOUB N E 7 IVB C31 C32 SING N N 8 IVB N07 C15 SING N N 9 IVB O05 C35 SING Y N 10 IVB C32 C33 SING Y N 11 IVB C15 C18 SING N N 12 IVB C15 C11 SING N N 13 IVB C35 C33 DOUB Y N 14 IVB C18 C14 SING N N 15 IVB C11 O01 SING N N 16 IVB C11 C08 SING N N 17 IVB O01 C20 SING N N 18 IVB O03 C26 SING N N 19 IVB C14 C09 SING N N 20 IVB C20 C26 DOUB Y N 21 IVB C20 C13 SING Y N 22 IVB O02 C09 SING N N 23 IVB C26 C27 SING Y N 24 IVB C08 C09 SING N N 25 IVB C08 C13 SING N N 26 IVB C08 C12 SING N N 27 IVB C09 C10 SING N N 28 IVB C13 C19 DOUB Y N 29 IVB C12 C17 SING N N 30 IVB C27 C25 DOUB Y N 31 IVB C19 C25 SING Y N 32 IVB C19 C16 SING N N 33 IVB C10 C16 SING N N 34 IVB C10 N06 SING N N 35 IVB C17 N06 SING N N 36 IVB N06 C21 SING N N 37 IVB C21 C22 SING N N 38 IVB C22 C23 SING N N 39 IVB C22 C24 SING N N 40 IVB C23 C24 SING N N 41 IVB C10 H1 SING N N 42 IVB C15 H2 SING N N 43 IVB C17 H3 SING N N 44 IVB C17 H4 SING N N 45 IVB C21 H5 SING N N 46 IVB C21 H6 SING N N 47 IVB C22 H7 SING N N 48 IVB C24 H8 SING N N 49 IVB C24 H9 SING N N 50 IVB C28 H10 SING N N 51 IVB C28 H11 SING N N 52 IVB C28 H12 SING N N 53 IVB C11 H13 SING N N 54 IVB C12 H14 SING N N 55 IVB C12 H15 SING N N 56 IVB C14 H16 SING N N 57 IVB C14 H17 SING N N 58 IVB C16 H18 SING N N 59 IVB C16 H19 SING N N 60 IVB C18 H20 SING N N 61 IVB C18 H21 SING N N 62 IVB C23 H22 SING N N 63 IVB C23 H23 SING N N 64 IVB C25 H24 SING N N 65 IVB C27 H25 SING N N 66 IVB C30 H27 SING N N 67 IVB C31 H28 SING N N 68 IVB C33 H30 SING N N 69 IVB C34 H31 SING N N 70 IVB C35 H32 SING N N 71 IVB O02 H34 SING N N 72 IVB O03 H35 SING N N 73 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor IVB InChI InChI 1.06 "InChI=1S/C28H32N2O5/c1-29(23(32)7-4-18-9-13-34-16-18)20-8-10-28(33)22-14-19-5-6-21(31)25-24(19)27(28,26(20)35-25)11-12-30(22)15-17-2-3-17/h4-7,9,13,16-17,20,22,26,31,33H,2-3,8,10-12,14-15H2,1H3/b7-4+/t20-,22-,26+,27+,28-/m1/s1" IVB InChIKey InChI 1.06 XGZZHZMWIXFATA-UEZBDDGYSA-N IVB SMILES_CANONICAL CACTVS 3.385 "CN([C@@H]1CC[C@@]2(O)[C@H]3Cc4ccc(O)c5O[C@@H]1[C@]2(CCN3CC6CC6)c45)C(=O)/C=C/c7cocc7" IVB SMILES CACTVS 3.385 "CN([CH]1CC[C]2(O)[CH]3Cc4ccc(O)c5O[CH]1[C]2(CCN3CC6CC6)c45)C(=O)C=Cc7cocc7" IVB SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN([C@@H]1CC[C@]2([C@H]3Cc4ccc(c5c4[C@]2([C@H]1O5)CCN3CC6CC6)O)O)C(=O)/C=C/c7ccoc7" IVB SMILES "OpenEye OEToolkits" 2.0.7 "CN(C1CCC2(C3Cc4ccc(c5c4C2(C1O5)CCN3CC6CC6)O)O)C(=O)C=Cc7ccoc7" # _pdbx_chem_comp_identifier.comp_id IVB _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(~{E})-~{N}-[(4~{R},4~{a}~{S},7~{R},7~{a}~{R},12~{b}~{S})-3-(cyclopropylmethyl)-4~{a},9-bis(oxidanyl)-1,2,4,5,6,7,7~{a},13-octahydro-4,12-methanobenzofuro[3,2-e]isoquinolin-7-yl]-3-(furan-3-yl)-~{N}-methyl-prop-2-enamide" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id IVB _pdbx_chem_comp_synonyms.name "~{N}-[(4~{R},4~{a}~{S},7~{R},7~{a}~{R},12~{b}~{S})-3-(cyclopropylmethyl)-4~{a},9-bis(oxidanyl)-1,2,4,5,6,7,7~{a},13-octahydro-4,12-methanobenzofuro[3,2-e]isoquinolin-7-yl]-3-(furan-3-yl)-~{N}-methyl-propanamide" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site IVB "Create component" 2022-07-19 PDBJ IVB "Initial release" 2023-04-12 RCSB IVB "Modify synonyms" 2023-04-14 PDBJ IVB "Modify name" 2023-09-15 PDBJ #