data_J3F # _chem_comp.id J3F _chem_comp.name "(5S)-5-[[4-[2-[[7-(diethylamino)-2-oxidanylidene-chromen-4-yl]-methyl-amino]ethoxy]phenyl]methyl]-1,3-thiazolidine-2,4-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H29 N3 O5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-03-31 _chem_comp.pdbx_modified_date 2021-05-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 495.591 _chem_comp.one_letter_code ? _chem_comp.three_letter_code J3F _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7EFQ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal J3F N1 N1 N 0 1 N N N 19.688 19.247 20.016 -8.217 1.526 -0.049 N1 J3F 1 J3F N3 N2 N 0 1 N N N 17.558 25.023 7.714 6.641 1.969 -0.642 N3 J3F 2 J3F C4 C1 C 0 1 N N N 18.517 17.096 17.582 -5.696 -0.770 0.430 C4 J3F 3 J3F C5 C2 C 0 1 Y N N 18.284 16.950 16.120 -4.226 -0.938 0.145 C5 J3F 4 J3F C6 C3 C 0 1 Y N N 19.347 16.836 15.246 -3.304 -0.111 0.760 C6 J3F 5 J3F C7 C4 C 0 1 Y N N 19.146 16.794 13.883 -1.956 -0.264 0.500 C7 J3F 6 J3F C8 C5 C 0 1 Y N N 17.852 16.852 13.410 -1.527 -1.248 -0.379 C8 J3F 7 J3F C10 C6 C 0 1 Y N N 16.997 16.988 15.612 -3.800 -1.924 -0.727 C10 J3F 8 J3F C13 C7 C 0 1 N N N 18.655 18.950 8.954 2.574 -4.229 -0.135 C13 J3F 9 J3F C15 C8 C 0 1 N N N 14.940 19.574 9.662 2.025 -1.763 1.698 C15 J3F 10 J3F C17 C9 C 0 1 Y N N 15.651 22.144 8.889 4.002 0.127 1.123 C17 J3F 11 J3F C20 C10 C 0 1 Y N N 17.237 23.772 8.131 5.653 1.028 -0.367 C20 J3F 12 J3F C21 C11 C 0 1 Y N N 18.244 22.784 8.212 5.340 0.054 -1.316 C21 J3F 13 J3F C22 C12 C 0 1 Y N N 17.953 21.526 8.633 4.374 -0.874 -1.059 C22 J3F 14 J3F C24 C13 C 0 1 N N N 19.661 25.400 6.487 8.083 2.474 1.268 C24 J3F 15 J3F C26 C14 C 0 1 N N N 17.441 27.538 7.905 6.600 2.800 -2.942 C26 J3F 16 J3F C1 C15 C 0 1 N N N 20.596 19.722 19.107 -7.360 2.536 0.110 C1 J3F 17 J3F C2 C16 C 0 1 N N N 18.618 18.565 19.503 -7.798 0.317 -0.386 C2 J3F 18 J3F C3 C17 C 0 1 N N S 18.621 18.514 18.000 -6.299 0.219 -0.569 C3 J3F 19 J3F S1 S1 S 0 1 N N N 20.171 19.284 17.461 -5.731 1.917 -0.215 S1 J3F 20 J3F O1 O1 O 0 1 N N N 21.587 20.356 19.394 -7.645 3.677 0.421 O1 J3F 21 J3F O2 O2 O 0 1 N N N 17.767 18.017 20.150 -8.546 -0.625 -0.534 O2 J3F 22 J3F C9 C18 C 0 1 Y N N 16.775 16.929 14.258 -2.454 -2.076 -0.995 C9 J3F 23 J3F O3 O3 O 0 1 N N N 17.458 16.670 12.128 -0.201 -1.400 -0.637 O3 J3F 24 J3F C11 C19 C 0 1 N N N 18.126 17.310 11.071 0.168 -2.433 -1.552 C11 J3F 25 J3F C12 C20 C 0 1 N N N 17.016 17.535 10.083 1.689 -2.451 -1.715 C12 J3F 26 J3F N2 N3 N 0 1 N N N 17.295 18.824 9.471 2.312 -2.820 -0.442 N2 J3F 27 J3F C14 C21 C 0 1 N N N 16.280 19.854 9.385 2.652 -1.843 0.468 C14 J3F 28 J3F C16 C22 C 0 1 N N N 13.918 20.591 9.560 2.390 -0.754 2.595 C16 J3F 29 J3F O4 O4 O 0 1 N N N 14.328 21.856 9.166 3.343 0.145 2.302 O4 J3F 30 J3F C18 C23 C 0 1 Y N N 16.649 21.170 8.992 3.694 -0.850 0.162 C18 J3F 31 J3F O5 O5 O 0 1 N N N 12.719 20.433 9.742 1.827 -0.690 3.675 O5 J3F 32 J3F C19 C24 C 0 1 Y N N 15.928 23.417 8.465 4.986 1.064 0.849 C19 J3F 33 J3F C23 C25 C 0 1 N N N 18.182 25.219 6.405 6.973 2.994 0.351 C23 J3F 34 J3F C25 C26 C 0 1 N N N 17.313 26.191 8.572 7.348 1.936 -1.924 C25 J3F 35 J3F H1 H1 H 0 1 N N N 19.801 19.390 20.999 -9.164 1.679 0.089 H1 J3F 36 J3F H4 H2 H 0 1 N N N 17.679 16.630 18.121 -6.197 -1.733 0.336 H4 J3F 37 J3F H3 H3 H 0 1 N N N 19.453 16.581 17.843 -5.828 -0.390 1.443 H3 J3F 38 J3F H5 H4 H 0 1 N N N 20.352 16.779 15.637 -3.638 0.655 1.444 H5 J3F 39 J3F H6 H5 H 0 1 N N N 19.981 16.718 13.202 -1.236 0.383 0.980 H6 J3F 40 J3F H8 H6 H 0 1 N N N 16.158 17.065 16.288 -4.522 -2.571 -1.203 H8 J3F 41 J3F H13 H7 H 0 1 N N N 19.211 18.022 9.154 3.499 -4.311 0.436 H13 J3F 42 J3F H14 H8 H 0 1 N N N 18.620 19.130 7.869 1.748 -4.633 0.450 H14 J3F 43 J3F H15 H9 H 0 1 N N N 19.159 19.793 9.449 2.670 -4.791 -1.064 H15 J3F 44 J3F H16 H10 H 0 1 N N N 14.661 18.574 9.959 1.255 -2.473 1.962 H16 J3F 45 J3F H18 H11 H 0 1 N N N 19.258 23.032 7.936 5.865 0.036 -2.259 H18 J3F 46 J3F H19 H12 H 0 1 N N N 18.741 20.789 8.691 4.135 -1.626 -1.797 H19 J3F 47 J3F H22 H13 H 0 1 N N N 20.070 25.542 5.476 7.741 1.572 1.776 H22 J3F 48 J3F H23 H14 H 0 1 N N N 19.889 26.283 7.102 8.967 2.244 0.674 H23 J3F 49 J3F H24 H15 H 0 1 N N N 20.115 24.508 6.944 8.330 3.237 2.007 H24 J3F 50 J3F H27 H16 H 0 1 N N N 17.237 28.332 8.639 5.590 2.413 -3.074 H27 J3F 51 J3F H28 H17 H 0 1 N N N 18.461 27.656 7.511 6.552 3.827 -2.580 H28 J3F 52 J3F H29 H18 H 0 1 N N N 16.718 27.608 7.079 7.126 2.775 -3.896 H29 J3F 53 J3F H2 H19 H 0 1 N N N 17.798 19.114 17.585 -6.053 -0.069 -1.591 H2 J3F 54 J3F H7 H20 H 0 1 N N N 15.769 16.943 13.866 -2.122 -2.843 -1.679 H7 J3F 55 J3F H10 H21 H 0 1 N N N 18.912 16.667 10.648 -0.168 -3.396 -1.167 H10 J3F 56 J3F H9 H22 H 0 1 N N N 18.568 18.263 11.398 -0.299 -2.246 -2.519 H9 J3F 57 J3F H12 H23 H 0 1 N N N 16.043 17.556 10.596 1.964 -3.179 -2.479 H12 J3F 58 J3F H11 H24 H 0 1 N N N 17.012 16.741 9.322 2.034 -1.462 -2.015 H11 J3F 59 J3F H17 H25 H 0 1 N N N 15.135 24.146 8.389 5.233 1.820 1.580 H17 J3F 60 J3F H21 H26 H 0 1 N N N 17.744 26.114 5.938 7.314 3.895 -0.157 H21 J3F 61 J3F H20 H27 H 0 1 N N N 17.970 24.339 5.780 6.089 3.224 0.946 H20 J3F 62 J3F H25 H28 H 0 1 N N N 16.291 26.108 8.970 8.358 2.322 -1.792 H25 J3F 63 J3F H26 H29 H 0 1 N N N 18.034 26.156 9.402 7.396 0.908 -2.286 H26 J3F 64 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal J3F C23 C24 SING N N 1 J3F C23 N3 SING N N 2 J3F N3 C20 SING N N 3 J3F N3 C25 SING N N 4 J3F C26 C25 SING N N 5 J3F C20 C21 SING Y N 6 J3F C20 C19 DOUB Y N 7 J3F C21 C22 DOUB Y N 8 J3F C19 C17 SING Y N 9 J3F C22 C18 SING Y N 10 J3F C17 C18 DOUB Y N 11 J3F C17 O4 SING N N 12 J3F C13 N2 SING N N 13 J3F C18 C14 SING N N 14 J3F O4 C16 SING N N 15 J3F C14 N2 SING N N 16 J3F C14 C15 DOUB N N 17 J3F N2 C12 SING N N 18 J3F C16 C15 SING N N 19 J3F C16 O5 DOUB N N 20 J3F C12 C11 SING N N 21 J3F C11 O3 SING N N 22 J3F O3 C8 SING N N 23 J3F C8 C7 DOUB Y N 24 J3F C8 C9 SING Y N 25 J3F C7 C6 SING Y N 26 J3F C9 C10 DOUB Y N 27 J3F C6 C5 DOUB Y N 28 J3F C10 C5 SING Y N 29 J3F C5 C4 SING N N 30 J3F S1 C3 SING N N 31 J3F S1 C1 SING N N 32 J3F C4 C3 SING N N 33 J3F C3 C2 SING N N 34 J3F C1 O1 DOUB N N 35 J3F C1 N1 SING N N 36 J3F C2 N1 SING N N 37 J3F C2 O2 DOUB N N 38 J3F N1 H1 SING N N 39 J3F C4 H4 SING N N 40 J3F C4 H3 SING N N 41 J3F C6 H5 SING N N 42 J3F C7 H6 SING N N 43 J3F C10 H8 SING N N 44 J3F C13 H13 SING N N 45 J3F C13 H14 SING N N 46 J3F C13 H15 SING N N 47 J3F C15 H16 SING N N 48 J3F C21 H18 SING N N 49 J3F C22 H19 SING N N 50 J3F C24 H22 SING N N 51 J3F C24 H23 SING N N 52 J3F C24 H24 SING N N 53 J3F C26 H27 SING N N 54 J3F C26 H28 SING N N 55 J3F C26 H29 SING N N 56 J3F C3 H2 SING N N 57 J3F C9 H7 SING N N 58 J3F C11 H10 SING N N 59 J3F C11 H9 SING N N 60 J3F C12 H12 SING N N 61 J3F C12 H11 SING N N 62 J3F C19 H17 SING N N 63 J3F C23 H21 SING N N 64 J3F C23 H20 SING N N 65 J3F C25 H25 SING N N 66 J3F C25 H26 SING N N 67 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor J3F InChI InChI 1.03 "InChI=1S/C26H29N3O5S/c1-4-29(5-2)18-8-11-20-21(16-24(30)34-22(20)15-18)28(3)12-13-33-19-9-6-17(7-10-19)14-23-25(31)27-26(32)35-23/h6-11,15-16,23H,4-5,12-14H2,1-3H3,(H,27,31,32)/t23-/m0/s1" J3F InChIKey InChI 1.03 LTRSSWCLZRFXEC-QHCPKHFHSA-N J3F SMILES_CANONICAL CACTVS 3.385 "CCN(CC)c1ccc2c(OC(=O)C=C2N(C)CCOc3ccc(C[C@@H]4SC(=O)NC4=O)cc3)c1" J3F SMILES CACTVS 3.385 "CCN(CC)c1ccc2c(OC(=O)C=C2N(C)CCOc3ccc(C[CH]4SC(=O)NC4=O)cc3)c1" J3F SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCN(CC)c1ccc2c(c1)OC(=O)C=C2N(C)CCOc3ccc(cc3)C[C@H]4C(=O)NC(=O)S4" J3F SMILES "OpenEye OEToolkits" 2.0.7 "CCN(CC)c1ccc2c(c1)OC(=O)C=C2N(C)CCOc3ccc(cc3)CC4C(=O)NC(=O)S4" # _pdbx_chem_comp_identifier.comp_id J3F _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(5~{S})-5-[[4-[2-[[7-(diethylamino)-2-oxidanylidene-chromen-4-yl]-methyl-amino]ethoxy]phenyl]methyl]-1,3-thiazolidine-2,4-dione" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site J3F "Create component" 2021-03-31 PDBJ J3F "Initial release" 2021-05-12 RCSB ##