data_J3U # _chem_comp.id J3U _chem_comp.name "(6S,7R,9E)-6,7-bis(oxidanyl)hexadeca-9,15-dien-11,13-diynoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H20 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-04-01 _chem_comp.pdbx_modified_date 2022-04-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 276.328 _chem_comp.one_letter_code ? _chem_comp.three_letter_code J3U _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7EI4 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal J3U OAR O1 O 0 1 N N N 2.550 -4.769 48.210 -8.692 -0.670 -0.258 OAR J3U 1 J3U CAO C1 C 0 1 N N N 1.797 -3.897 47.698 -7.385 -0.977 -0.258 CAO J3U 2 J3U OAS O2 O 0 1 N N N 1.970 -2.673 47.754 -7.033 -2.120 -0.433 OAS J3U 3 J3U CAN C2 C 0 1 N N N 0.557 -4.339 46.945 -6.357 0.103 -0.040 CAN J3U 4 J3U CAM C3 C 0 1 N N N 1.029 -5.392 45.959 -4.956 -0.510 -0.086 CAM J3U 5 J3U CAL C4 C 0 1 N N N -0.185 -6.274 45.696 -3.912 0.586 0.135 CAL J3U 6 J3U CAK C5 C 0 1 N N N 0.383 -7.512 45.015 -2.511 -0.027 0.089 CAK J3U 7 J3U CAJ C6 C 0 1 N N S -0.740 -8.127 44.216 -1.467 1.070 0.310 CAJ J3U 8 J3U OAQ O3 O 0 1 N N N -1.835 -8.394 45.109 -1.511 1.996 -0.777 OAQ J3U 9 J3U CAI C7 C 0 1 N N R -0.232 -9.414 43.512 -0.075 0.440 0.388 CAI J3U 10 J3U OAP O4 O 0 1 N N N -0.600 -9.322 42.153 -0.031 -0.486 1.475 OAP J3U 11 J3U CAH C8 C 0 1 N N N -0.899 -10.629 44.079 0.969 1.536 0.610 CAH J3U 12 J3U CAG C9 C 0 1 N N N -1.016 -11.692 43.000 2.349 0.933 0.563 CAG J3U 13 J3U CAF C10 C 0 1 N N N 0.116 -12.660 42.783 3.262 1.418 -0.281 CAF J3U 14 J3U CAE C11 C 0 1 N N N 0.022 -13.603 42.010 4.573 0.844 -0.325 CAE J3U 15 J3U CAD C12 C 0 1 N N N 0.085 -14.692 41.122 5.648 0.374 -0.361 CAD J3U 16 J3U CAC C13 C 0 1 N N N 0.273 -15.756 40.268 6.909 -0.178 -0.403 CAC J3U 17 J3U CAB C14 C 0 1 N N N 0.552 -16.853 39.414 7.984 -0.648 -0.439 CAB J3U 18 J3U CAA C15 C 0 1 N N N 0.879 -18.079 38.526 9.296 -1.222 -0.483 CAA J3U 19 J3U CAT C16 C 0 1 N N N 2.331 -18.385 37.961 9.605 -2.241 0.321 CAT J3U 20 J3U H1 H1 H 0 1 N N N 3.276 -4.342 48.649 -9.314 -1.396 -0.402 H1 J3U 21 J3U H2 H2 H 0 1 N N N 0.108 -3.488 46.412 -6.450 0.857 -0.821 H2 J3U 22 J3U H3 H3 H 0 1 N N N -0.181 -4.767 47.639 -6.518 0.567 0.933 H3 J3U 23 J3U H4 H4 H 0 1 N N N 1.849 -5.985 46.392 -4.863 -1.264 0.695 H4 J3U 24 J3U H5 H5 H 0 1 N N N 1.371 -4.920 45.026 -4.794 -0.974 -1.060 H5 J3U 25 J3U H6 H6 H 0 1 N N N -0.902 -5.762 45.037 -4.005 1.340 -0.646 H6 J3U 26 J3U H7 H7 H 0 1 N N N -0.682 -6.543 46.640 -4.073 1.050 1.108 H7 J3U 27 J3U H8 H8 H 0 1 N N N 0.746 -8.226 45.769 -2.418 -0.780 0.870 H8 J3U 28 J3U H9 H9 H 0 1 N N N 1.211 -7.230 44.348 -2.349 -0.491 -0.885 H9 J3U 29 J3U H10 H10 H 0 1 N N N -1.057 -7.413 43.442 -1.682 1.593 1.242 H10 J3U 30 J3U H11 H11 H 0 1 N N N -2.115 -7.584 45.518 -1.329 1.599 -1.640 H11 J3U 31 J3U H12 H12 H 0 1 N N N 0.859 -9.490 43.630 0.140 -0.083 -0.544 H12 J3U 32 J3U H13 H13 H 0 1 N N N -0.191 -8.558 41.765 -0.213 -0.089 2.338 H13 J3U 33 J3U H14 H14 H 0 1 N N N -1.903 -10.361 44.440 0.876 2.290 -0.172 H14 J3U 34 J3U H15 H15 H 0 1 N N N -0.300 -11.019 44.915 0.808 2.000 1.583 H15 J3U 35 J3U H16 H16 H 0 1 N N N -1.907 -11.753 42.392 2.600 0.108 1.214 H16 J3U 36 J3U H17 H17 H 0 1 N N N 1.039 -12.518 43.326 3.011 2.242 -0.932 H17 J3U 37 J3U H19 H19 H 0 1 N N N 0.079 -18.761 38.278 10.034 -0.830 -1.167 H19 J3U 38 J3U H20 H20 H 0 1 N N N 2.498 -19.257 37.346 8.867 -2.633 1.004 H20 J3U 39 J3U H21 H21 H 0 1 N N N 3.151 -17.721 38.192 10.594 -2.674 0.288 H21 J3U 40 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal J3U CAT CAA DOUB N N 1 J3U CAA CAB SING N N 2 J3U CAB CAC TRIP N N 3 J3U CAC CAD SING N N 4 J3U CAD CAE TRIP N N 5 J3U CAE CAF SING N N 6 J3U OAP CAI SING N N 7 J3U CAF CAG DOUB N E 8 J3U CAG CAH SING N N 9 J3U CAI CAH SING N N 10 J3U CAI CAJ SING N N 11 J3U CAJ CAK SING N N 12 J3U CAJ OAQ SING N N 13 J3U CAK CAL SING N N 14 J3U CAL CAM SING N N 15 J3U CAM CAN SING N N 16 J3U CAN CAO SING N N 17 J3U CAO OAS DOUB N N 18 J3U CAO OAR SING N N 19 J3U OAR H1 SING N N 20 J3U CAN H2 SING N N 21 J3U CAN H3 SING N N 22 J3U CAM H4 SING N N 23 J3U CAM H5 SING N N 24 J3U CAL H6 SING N N 25 J3U CAL H7 SING N N 26 J3U CAK H8 SING N N 27 J3U CAK H9 SING N N 28 J3U CAJ H10 SING N N 29 J3U OAQ H11 SING N N 30 J3U CAI H12 SING N N 31 J3U OAP H13 SING N N 32 J3U CAH H14 SING N N 33 J3U CAH H15 SING N N 34 J3U CAG H16 SING N N 35 J3U CAF H17 SING N N 36 J3U CAA H19 SING N N 37 J3U CAT H20 SING N N 38 J3U CAT H21 SING N N 39 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor J3U InChI InChI 1.03 "InChI=1S/C16H20O4/c1-2-3-4-5-6-7-8-11-14(17)15(18)12-9-10-13-16(19)20/h2,7-8,14-15,17-18H,1,9-13H2,(H,19,20)/b8-7+/t14-,15+/m1/s1" J3U InChIKey InChI 1.03 JBBDMFIFQBMXHD-PEGRTIRESA-N J3U SMILES_CANONICAL CACTVS 3.385 "O[C@@H](CCCCC(O)=O)[C@H](O)C/C=C/C#CC#CC=C" J3U SMILES CACTVS 3.385 "O[CH](CCCCC(O)=O)[CH](O)CC=CC#CC#CC=C" J3U SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C=CC#CC#C/C=C/C[C@H]([C@H](CCCCC(=O)O)O)O" J3U SMILES "OpenEye OEToolkits" 2.0.7 "C=CC#CC#CC=CCC(C(CCCCC(=O)O)O)O" # _pdbx_chem_comp_identifier.comp_id J3U _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(6~{S},7~{R},9~{E})-6,7-bis(oxidanyl)hexadeca-9,15-dien-11,13-diynoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site J3U "Create component" 2021-04-01 PDBJ J3U "Initial release" 2022-04-06 RCSB ##