data_J5F # _chem_comp.id J5F _chem_comp.name "(1R,2R)-N-[(2S,3S)-2-azanyl-3-methyl-pentyl]-N-[4-(4-propylphenyl)phenyl]-2-pyridin-2-yl-cyclopropane-1-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C30 H37 N3 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-04-09 _chem_comp.pdbx_modified_date 2022-04-18 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 455.634 _chem_comp.one_letter_code ? _chem_comp.three_letter_code J5F _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7EJX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal J5F C11 C1 C 0 1 N N N 144.571 144.982 155.123 -4.064 0.488 -1.688 C11 J5F 1 J5F C13 C2 C 0 1 N N N 143.385 147.097 159.683 -1.719 -1.268 0.875 C13 J5F 2 J5F C14 C3 C 0 1 N N S 142.125 147.963 159.941 -1.869 -2.340 -0.206 C14 J5F 3 J5F C21 C4 C 0 1 Y N N 141.612 144.095 158.840 0.978 0.055 1.426 C21 J5F 4 J5F C22 C5 C 0 1 Y N N 141.245 142.875 159.413 2.345 0.226 1.393 C22 J5F 5 J5F C23 C6 C 0 1 Y N N 142.076 142.281 160.358 2.989 0.461 0.179 C23 J5F 6 J5F C24 C7 C 0 1 Y N N 141.686 140.948 161.006 4.460 0.645 0.142 C24 J5F 7 J5F C25 C8 C 0 1 Y N N 140.988 139.963 160.306 5.204 0.576 1.319 C25 J5F 8 J5F C26 C9 C 0 1 Y N N 140.650 138.766 160.933 6.573 0.748 1.278 C26 J5F 9 J5F C27 C10 C 0 1 Y N N 141.005 138.561 162.265 7.207 0.987 0.072 C27 J5F 10 J5F C28 C11 C 0 1 N N N 140.649 137.254 162.995 8.702 1.173 0.035 C28 J5F 11 J5F C29 C12 C 0 1 N N N 139.903 137.508 164.322 9.379 -0.184 -0.169 C29 J5F 12 J5F C31 C13 C 0 1 Y N N 141.690 139.552 162.953 6.474 1.055 -1.099 C31 J5F 13 J5F C32 C14 C 0 1 Y N N 142.040 140.738 162.330 5.105 0.880 -1.071 C32 J5F 14 J5F C33 C15 C 0 1 Y N N 143.266 142.900 160.744 2.247 0.523 -0.999 C33 J5F 15 J5F C34 C16 C 0 1 Y N N 143.631 144.115 160.167 0.880 0.353 -0.962 C34 J5F 16 J5F O1 O1 O 0 1 N N N 144.163 147.138 156.886 -1.491 1.939 -0.625 O1 J5F 17 J5F C2 C17 C 0 1 N N N 143.751 146.107 157.293 -1.957 0.893 -0.226 C2 J5F 18 J5F C3 C18 C 0 1 N N R 143.691 144.877 156.358 -3.443 0.654 -0.299 C3 J5F 19 J5F C4 C19 C 0 1 N N R 143.047 145.005 154.982 -4.310 1.769 -0.888 C4 J5F 20 J5F C5 C20 C 0 1 Y N N 142.185 143.991 154.215 -5.682 1.969 -0.298 C5 J5F 21 J5F N6 N1 N 0 1 Y N N 141.381 144.413 153.261 -5.860 2.870 0.648 N6 J5F 22 J5F C7 C21 C 0 1 Y N N 140.620 143.575 152.578 -7.044 3.083 1.189 C7 J5F 23 J5F C8 C22 C 0 1 Y N N 140.664 142.217 152.866 -8.149 2.361 0.780 C8 J5F 24 J5F C9 C23 C 0 1 Y N N 141.503 141.741 153.867 -8.000 1.403 -0.213 C9 J5F 25 J5F C10 C24 C 0 1 Y N N 142.283 142.651 154.564 -6.741 1.208 -0.758 C10 J5F 26 J5F N12 N2 N 0 1 N N N 143.297 145.981 158.699 -1.146 -0.056 0.284 N12 J5F 27 J5F N15 N3 N 0 1 N N N 141.659 148.575 158.712 -0.572 -2.562 -0.859 N15 J5F 28 J5F C16 C25 C 0 1 N N S 140.992 147.135 160.549 -2.349 -3.645 0.433 C16 J5F 29 J5F C17 C26 C 0 1 N N N 141.185 146.990 162.056 -3.700 -3.413 1.113 C17 J5F 30 J5F C18 C27 C 0 1 N N N 139.652 147.821 160.288 -2.499 -4.717 -0.648 C18 J5F 31 J5F C19 C28 C 0 1 N N N 138.508 146.788 160.370 -2.858 -6.053 0.005 C19 J5F 32 J5F C20 C29 C 0 1 Y N N 142.818 144.693 159.219 0.241 0.118 0.249 C20 J5F 33 J5F C30 C30 C 0 1 N N N 139.432 136.207 164.999 10.897 0.005 -0.208 C30 J5F 34 J5F H1 H1 H 0 1 N N N 145.142 144.107 154.779 -3.398 0.552 -2.548 H1 J5F 35 J5F H2 H2 H 0 1 N N N 145.154 145.896 154.939 -4.895 -0.211 -1.787 H2 J5F 36 J5F H3 H3 H 0 1 N N N 143.678 146.656 160.647 -2.697 -1.039 1.299 H3 J5F 37 J5F H4 H4 H 0 1 N N N 144.178 147.775 159.334 -1.059 -1.635 1.661 H4 J5F 38 J5F H5 H5 H 0 1 N N N 142.397 148.752 160.658 -2.597 -2.009 -0.947 H5 J5F 39 J5F H6 H6 H 0 1 N N N 140.971 144.571 158.112 0.479 -0.132 2.365 H6 J5F 40 J5F H7 H7 H 0 1 N N N 140.321 142.395 159.124 2.918 0.177 2.308 H7 J5F 41 J5F H8 H8 H 0 1 N N N 140.709 140.129 159.276 4.710 0.390 2.261 H8 J5F 42 J5F H9 H9 H 0 1 N N N 140.116 138.001 160.390 7.150 0.696 2.190 H9 J5F 43 J5F H10 H10 H 0 1 N N N 140.008 136.646 162.340 8.965 1.837 -0.788 H10 J5F 44 J5F H11 H11 H 0 1 N N N 141.578 136.705 163.211 9.038 1.609 0.975 H11 J5F 45 J5F H12 H12 H 0 1 N N N 140.579 138.038 165.010 9.117 -0.849 0.654 H12 J5F 46 J5F H13 H13 H 0 1 N N N 139.023 138.136 164.116 9.043 -0.620 -1.110 H13 J5F 47 J5F H14 H14 H 0 1 N N N 141.954 139.396 163.989 6.974 1.243 -2.037 H14 J5F 48 J5F H15 H15 H 0 1 N N N 142.586 141.496 162.873 4.535 0.929 -1.986 H15 J5F 49 J5F H16 H16 H 0 1 N N N 143.901 142.440 161.486 2.744 0.706 -1.941 H16 J5F 50 J5F H17 H17 H 0 1 N N N 144.549 144.601 160.463 0.305 0.401 -1.875 H17 J5F 51 J5F H18 H18 H 0 1 N N N 143.631 143.893 156.846 -3.865 0.064 0.515 H18 J5F 52 J5F H19 H19 H 0 1 N N N 142.686 146.030 154.812 -3.805 2.675 -1.222 H19 J5F 53 J5F H20 H20 H 0 1 N N N 139.968 143.944 151.800 -7.151 3.830 1.962 H20 J5F 54 J5F H21 H21 H 0 1 N N N 140.044 141.529 152.310 -9.115 2.539 1.227 H21 J5F 55 J5F H22 H22 H 0 1 N N N 141.546 140.687 154.096 -8.846 0.824 -0.552 H22 J5F 56 J5F H23 H23 H 0 1 N N N 142.946 142.328 155.353 -6.590 0.475 -1.536 H23 J5F 57 J5F H24 H24 H 0 1 N N N 140.847 149.128 158.901 -0.264 -1.733 -1.343 H24 J5F 58 J5F H25 H25 H 0 1 N N N 142.379 149.158 158.336 0.120 -2.870 -0.192 H25 J5F 59 J5F H27 H27 H 0 1 N N N 140.984 146.137 160.086 -1.621 -3.976 1.174 H27 J5F 60 J5F H28 H28 H 0 1 N N N 140.362 146.393 162.476 -4.041 -4.343 1.569 H28 J5F 61 J5F H29 H29 H 0 1 N N N 142.143 146.487 162.256 -3.592 -2.649 1.883 H29 J5F 62 J5F H30 H30 H 0 1 N N N 141.190 147.986 162.522 -4.427 -3.082 0.372 H30 J5F 63 J5F H31 H31 H 0 1 N N N 139.663 148.274 159.286 -3.290 -4.427 -1.340 H31 J5F 64 J5F H32 H32 H 0 1 N N N 139.490 148.605 161.043 -1.560 -4.819 -1.192 H32 J5F 65 J5F H33 H33 H 0 1 N N N 137.547 147.289 160.181 -2.067 -6.343 0.697 H33 J5F 66 J5F H34 H34 H 0 1 N N N 138.667 146.004 159.615 -3.797 -5.951 0.549 H34 J5F 67 J5F H35 H35 H 0 1 N N N 138.495 146.335 161.372 -2.965 -6.817 -0.765 H35 J5F 68 J5F H36 H36 H 0 1 N N N 138.909 136.449 165.936 11.160 0.669 -1.031 H36 J5F 69 J5F H37 H37 H 0 1 N N N 138.748 135.670 164.326 11.233 0.441 0.733 H37 J5F 70 J5F H38 H38 H 0 1 N N N 140.303 135.572 165.219 11.380 -0.962 -0.353 H38 J5F 71 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal J5F C7 C8 DOUB Y N 1 J5F C7 N6 SING Y N 2 J5F C8 C9 SING Y N 3 J5F N6 C5 DOUB Y N 4 J5F C9 C10 DOUB Y N 5 J5F C5 C10 SING Y N 6 J5F C5 C4 SING N N 7 J5F C4 C11 SING N N 8 J5F C4 C3 SING N N 9 J5F C11 C3 SING N N 10 J5F C3 C2 SING N N 11 J5F O1 C2 DOUB N N 12 J5F C2 N12 SING N N 13 J5F N12 C20 SING N N 14 J5F N12 C13 SING N N 15 J5F N15 C14 SING N N 16 J5F C21 C20 DOUB Y N 17 J5F C21 C22 SING Y N 18 J5F C20 C34 SING Y N 19 J5F C22 C23 DOUB Y N 20 J5F C13 C14 SING N N 21 J5F C14 C16 SING N N 22 J5F C34 C33 DOUB Y N 23 J5F C18 C19 SING N N 24 J5F C18 C16 SING N N 25 J5F C25 C26 DOUB Y N 26 J5F C25 C24 SING Y N 27 J5F C23 C33 SING Y N 28 J5F C23 C24 SING N N 29 J5F C16 C17 SING N N 30 J5F C26 C27 SING Y N 31 J5F C24 C32 DOUB Y N 32 J5F C27 C31 DOUB Y N 33 J5F C27 C28 SING N N 34 J5F C32 C31 SING Y N 35 J5F C28 C29 SING N N 36 J5F C29 C30 SING N N 37 J5F C11 H1 SING N N 38 J5F C11 H2 SING N N 39 J5F C13 H3 SING N N 40 J5F C13 H4 SING N N 41 J5F C14 H5 SING N N 42 J5F C21 H6 SING N N 43 J5F C22 H7 SING N N 44 J5F C25 H8 SING N N 45 J5F C26 H9 SING N N 46 J5F C28 H10 SING N N 47 J5F C28 H11 SING N N 48 J5F C29 H12 SING N N 49 J5F C29 H13 SING N N 50 J5F C31 H14 SING N N 51 J5F C32 H15 SING N N 52 J5F C33 H16 SING N N 53 J5F C34 H17 SING N N 54 J5F C3 H18 SING N N 55 J5F C4 H19 SING N N 56 J5F C7 H20 SING N N 57 J5F C8 H21 SING N N 58 J5F C9 H22 SING N N 59 J5F C10 H23 SING N N 60 J5F N15 H24 SING N N 61 J5F N15 H25 SING N N 62 J5F C16 H27 SING N N 63 J5F C17 H28 SING N N 64 J5F C17 H29 SING N N 65 J5F C17 H30 SING N N 66 J5F C18 H31 SING N N 67 J5F C18 H32 SING N N 68 J5F C19 H33 SING N N 69 J5F C19 H34 SING N N 70 J5F C19 H35 SING N N 71 J5F C30 H36 SING N N 72 J5F C30 H37 SING N N 73 J5F C30 H38 SING N N 74 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor J5F InChI InChI 1.03 "InChI=1S/C30H37N3O/c1-4-8-22-10-12-23(13-11-22)24-14-16-25(17-15-24)33(20-28(31)21(3)5-2)30(34)27-19-26(27)29-9-6-7-18-32-29/h6-7,9-18,21,26-28H,4-5,8,19-20,31H2,1-3H3/t21-,26+,27+,28+/m0/s1" J5F InChIKey InChI 1.03 OBGKRTYDTRUMGO-RFNYNIMXSA-N J5F SMILES_CANONICAL CACTVS 3.385 "CCCc1ccc(cc1)c2ccc(cc2)N(C[C@@H](N)[C@@H](C)CC)C(=O)[C@@H]3C[C@H]3c4ccccn4" J5F SMILES CACTVS 3.385 "CCCc1ccc(cc1)c2ccc(cc2)N(C[CH](N)[CH](C)CC)C(=O)[CH]3C[CH]3c4ccccn4" J5F SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCc1ccc(cc1)c2ccc(cc2)N(C[C@H]([C@@H](C)CC)N)C(=O)[C@@H]3C[C@H]3c4ccccn4" J5F SMILES "OpenEye OEToolkits" 2.0.7 "CCCc1ccc(cc1)c2ccc(cc2)N(CC(C(C)CC)N)C(=O)C3CC3c4ccccn4" # _pdbx_chem_comp_identifier.comp_id J5F _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(1~{R},2~{R})-~{N}-[(2~{S},3~{S})-2-azanyl-3-methyl-pentyl]-~{N}-[4-(4-propylphenyl)phenyl]-2-pyridin-2-yl-cyclopropane-1-carboxamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site J5F "Create component" 2021-04-09 PDBJ J5F "Initial release" 2022-04-13 RCSB J5F "Modify coordinates" 2022-04-18 PDBJ J5F "Modify descriptor" 2022-04-18 PDBJ ##