data_J79 # _chem_comp.id J79 _chem_comp.name "(2R)-2-[(2R,3R,4R,5S,6R)-3-acetamido-2,5-bis(oxidanyl)-6-(phosphonooxymethyl)oxan-4-yl]oxypropanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H20 N O11 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-04-19 _chem_comp.pdbx_modified_date 2022-04-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 373.250 _chem_comp.one_letter_code ? _chem_comp.three_letter_code J79 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7EN7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal J79 C02 C1 C 0 1 N N S 2.522 -12.121 -10.934 0.132 -1.034 -0.338 C02 J79 1 J79 C03 C2 C 0 1 N N R 3.944 -12.114 -10.495 -1.206 -0.539 0.220 C03 J79 2 J79 C05 C3 C 0 1 N N R 5.569 -10.673 -11.539 -3.357 -1.566 0.467 C05 J79 3 J79 C06 C4 C 0 1 N N N 5.066 -9.635 -12.580 -3.097 -2.925 1.118 C06 J79 4 J79 C07 C5 C 0 1 N N N 7.014 -11.076 -11.760 -4.642 -1.623 -0.318 C07 J79 5 J79 C10 C6 C 0 1 N N R 4.343 -13.421 -9.900 -1.341 0.960 -0.064 C10 J79 6 J79 C12 C7 C 0 1 N N N 6.752 -14.241 -9.885 -3.239 2.488 -0.046 C12 J79 7 J79 C13 C8 C 0 1 N N N 8.175 -14.104 -9.293 -4.517 3.003 0.564 C13 J79 8 J79 C15 C9 C 0 1 N N R 3.450 -13.799 -8.743 -0.147 1.698 0.548 C15 J79 9 J79 C18 C10 C 0 1 N N R 1.653 -12.538 -9.761 1.269 -0.220 0.286 C18 J79 10 J79 C19 C11 C 0 1 N N N 0.216 -12.678 -10.184 2.605 -0.668 -0.311 C19 J79 11 J79 N11 N1 N 0 1 N N N 5.729 -13.345 -9.378 -2.583 1.461 0.530 N11 J79 12 J79 O01 O1 O 0 1 N N N 2.138 -10.796 -11.344 0.302 -2.416 -0.014 O01 J79 13 J79 O04 O2 O 0 1 N N N 4.788 -11.846 -11.663 -2.277 -1.243 -0.411 O04 J79 14 J79 O08 O3 O 0 1 N N N 7.300 -11.897 -12.671 -4.622 -1.499 -1.520 O08 J79 15 J79 O09 O4 O 0 1 N N N 7.910 -10.598 -11.041 -5.810 -1.811 0.318 O09 J79 16 J79 O14 O5 O 0 1 N N N 6.500 -15.037 -10.719 -2.801 2.997 -1.056 O14 J79 17 J79 O16 O6 O 0 1 N N N 3.716 -15.066 -8.288 -0.237 3.090 0.239 O16 J79 18 J79 O17 O7 O 0 1 N N N 2.074 -13.847 -9.262 1.066 1.168 0.010 O17 J79 19 J79 O20 O8 O 0 1 N N N 0.158 -13.637 -11.219 3.674 0.009 0.353 O20 J79 20 J79 O22 O9 O 0 1 N N N -1.549 -12.540 -12.782 5.497 0.297 -1.519 O22 J79 21 J79 O23 O10 O 0 1 N N N -2.339 -14.027 -10.943 6.151 0.598 1.010 O23 J79 22 J79 O24 O11 O 0 1 N N N -1.098 -15.026 -12.890 5.543 -1.664 0.069 O24 J79 23 J79 P21 P1 P 0 1 N N N -1.294 -13.818 -11.998 5.223 -0.222 -0.020 P21 J79 24 J79 H1 H1 H 0 1 N N N 2.389 -12.835 -11.760 0.145 -0.908 -1.420 H1 J79 25 J79 H2 H2 H 0 1 N N N 4.088 -11.319 -9.748 -1.238 -0.710 1.296 H2 J79 26 J79 H3 H3 H 0 1 N N N 5.464 -10.242 -10.532 -3.437 -0.802 1.240 H3 J79 27 J79 H4 H4 H 0 1 N N N 4.016 -9.383 -12.369 -2.932 -3.674 0.344 H4 J79 28 J79 H5 H5 H 0 1 N N N 5.681 -8.725 -12.517 -2.214 -2.860 1.754 H5 J79 29 J79 H6 H6 H 0 1 N N N 5.144 -10.062 -13.591 -3.959 -3.210 1.722 H6 J79 30 J79 H7 H7 H 0 1 N N N 4.285 -14.204 -10.670 -1.359 1.127 -1.141 H7 J79 31 J79 H8 H8 H 0 1 N N N 8.843 -14.837 -9.769 -4.750 2.426 1.459 H8 J79 32 J79 H9 H9 H 0 1 N N N 8.554 -13.088 -9.480 -4.395 4.053 0.831 H9 J79 33 J79 H10 H10 H 0 1 N N N 8.140 -14.289 -8.209 -5.330 2.903 -0.155 H10 J79 34 J79 H11 H11 H 0 1 N N N 3.534 -13.048 -7.944 -0.154 1.564 1.630 H11 J79 35 J79 H12 H12 H 0 1 N N N 1.731 -11.785 -8.963 1.281 -0.378 1.364 H12 J79 36 J79 H13 H13 H 0 1 N N N -0.162 -11.711 -10.549 2.718 -1.744 -0.179 H13 J79 37 J79 H14 H14 H 0 1 N N N -0.394 -13.012 -9.331 2.627 -0.428 -1.374 H14 J79 38 J79 H15 H15 H 0 1 N N N 5.960 -12.674 -8.674 -2.933 1.054 1.337 H15 J79 39 J79 H16 H16 H 0 1 N N N 1.230 -10.801 -11.624 1.130 -2.796 -0.338 H16 J79 40 J79 H17 H17 H 0 1 N N N 8.751 -10.951 -11.306 -6.607 -1.840 -0.228 H17 J79 41 J79 H18 H18 H 0 1 N N N 3.138 -15.270 -7.562 0.488 3.620 0.597 H18 J79 42 J79 H19 H19 H 0 1 N N N -1.540 -12.732 -13.712 5.309 1.236 -1.651 H19 J79 43 J79 H20 H20 H 0 1 N N N -2.701 -14.902 -11.024 7.099 0.504 0.845 H20 J79 44 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal J79 O24 P21 DOUB N N 1 J79 O22 P21 SING N N 2 J79 O08 C07 DOUB N N 3 J79 C06 C05 SING N N 4 J79 P21 O20 SING N N 5 J79 P21 O23 SING N N 6 J79 C07 C05 SING N N 7 J79 C07 O09 SING N N 8 J79 O04 C05 SING N N 9 J79 O04 C03 SING N N 10 J79 O01 C02 SING N N 11 J79 O20 C19 SING N N 12 J79 C02 C03 SING N N 13 J79 C02 C18 SING N N 14 J79 O14 C12 DOUB N N 15 J79 C03 C10 SING N N 16 J79 C19 C18 SING N N 17 J79 C10 N11 SING N N 18 J79 C10 C15 SING N N 19 J79 C12 N11 SING N N 20 J79 C12 C13 SING N N 21 J79 C18 O17 SING N N 22 J79 O17 C15 SING N N 23 J79 C15 O16 SING N N 24 J79 C02 H1 SING N N 25 J79 C03 H2 SING N N 26 J79 C05 H3 SING N N 27 J79 C06 H4 SING N N 28 J79 C06 H5 SING N N 29 J79 C06 H6 SING N N 30 J79 C10 H7 SING N N 31 J79 C13 H8 SING N N 32 J79 C13 H9 SING N N 33 J79 C13 H10 SING N N 34 J79 C15 H11 SING N N 35 J79 C18 H12 SING N N 36 J79 C19 H13 SING N N 37 J79 C19 H14 SING N N 38 J79 N11 H15 SING N N 39 J79 O01 H16 SING N N 40 J79 O09 H17 SING N N 41 J79 O16 H18 SING N N 42 J79 O22 H19 SING N N 43 J79 O23 H20 SING N N 44 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor J79 InChI InChI 1.03 "InChI=1S/C11H20NO11P/c1-4(10(15)16)22-9-7(12-5(2)13)11(17)23-6(8(9)14)3-21-24(18,19)20/h4,6-9,11,14,17H,3H2,1-2H3,(H,12,13)(H,15,16)(H2,18,19,20)/t4-,6-,7-,8-,9-,11-/m1/s1" J79 InChIKey InChI 1.03 NMEMTQKUEVNSPV-YVNCZSHWSA-N J79 SMILES_CANONICAL CACTVS 3.385 "C[C@@H](O[C@H]1[C@H](O)[C@@H](CO[P](O)(O)=O)O[C@@H](O)[C@@H]1NC(C)=O)C(O)=O" J79 SMILES CACTVS 3.385 "C[CH](O[CH]1[CH](O)[CH](CO[P](O)(O)=O)O[CH](O)[CH]1NC(C)=O)C(O)=O" J79 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H](C(=O)O)O[C@@H]1[C@H]([C@@H](O[C@@H]([C@H]1O)COP(=O)(O)O)O)NC(=O)C" J79 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C(=O)O)OC1C(C(OC(C1O)COP(=O)(O)O)O)NC(=O)C" # _pdbx_chem_comp_identifier.comp_id J79 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{R})-2-[(2~{R},3~{R},4~{R},5~{S},6~{R})-3-acetamido-2,5-bis(oxidanyl)-6-(phosphonooxymethyl)oxan-4-yl]oxypropanoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site J79 "Create component" 2021-04-19 PDBJ J79 "Initial release" 2022-04-20 RCSB ##