data_JJ1 # _chem_comp.id JJ1 _chem_comp.name "N-[(1S)-1-{[(1S)-5-AMINO-1-[(2-CYCLOHEXYLETHYL)CARBAMOYL]PENTYL]CARBAMOYL}-2-HYDROXYETHYL]-10-HYDROXYDECANAMIDE" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H52 N4 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2013-09-20 _chem_comp.pdbx_modified_date 2014-09-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 512.726 _chem_comp.one_letter_code ? _chem_comp.three_letter_code JJ1 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4C7I _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal JJ1 O4 O4 O 0 1 N N N 6.614 53.235 63.850 0.638 -0.449 1.120 O4 JJ1 1 JJ1 C6 C6 C 0 1 N N N 7.511 53.505 63.030 0.780 0.186 0.096 C6 JJ1 2 JJ1 N1 N1 N 0 1 N N N 8.386 54.470 63.279 1.990 0.250 -0.494 N1 JJ1 3 JJ1 C1 C1 C 0 1 N N S 8.290 55.404 64.334 3.133 -0.447 0.101 C1 JJ1 4 JJ1 C2 C2 C 0 1 N N N 9.226 54.974 65.497 3.144 -1.903 -0.369 C2 JJ1 5 JJ1 C3 C3 C 0 1 N N N 10.722 55.009 65.080 1.906 -2.622 0.171 C3 JJ1 6 JJ1 C4 C4 C 0 1 N N N 11.653 54.463 66.231 1.917 -4.078 -0.299 C4 JJ1 7 JJ1 C5 C5 C 0 1 N N N 13.125 54.447 65.767 0.679 -4.797 0.240 C5 JJ1 8 JJ1 N N N 0 1 N N N 13.344 53.557 64.650 0.689 -6.195 -0.211 N JJ1 9 JJ1 C C C 0 1 N N N 8.602 56.787 63.849 4.411 0.229 -0.326 C JJ1 10 JJ1 N3 N3 N 0 1 N N N 8.299 57.761 64.706 5.598 -0.243 0.103 N3 JJ1 11 JJ1 C19 C19 C 0 1 N N N 8.505 59.145 64.424 6.840 0.413 -0.313 C19 JJ1 12 JJ1 C20 C20 C 0 1 N N N 7.264 59.933 64.890 8.034 -0.314 0.309 C20 JJ1 13 JJ1 C21 C21 C 0 1 N N N 7.386 61.408 64.606 9.332 0.371 -0.125 C21 JJ1 14 JJ1 C26 C26 C 0 1 N N N 6.249 62.217 65.328 10.529 -0.428 0.393 C26 JJ1 15 JJ1 C25 C25 C 0 1 N N N 6.430 63.723 65.051 11.826 0.257 -0.040 C25 JJ1 16 JJ1 C24 C24 C 0 1 N N N 6.332 64.001 63.553 11.871 1.674 0.535 C24 JJ1 17 JJ1 C23 C23 C 0 1 N N N 7.421 63.145 62.785 10.674 2.474 0.017 C23 JJ1 18 JJ1 C22 C22 C 0 1 N N N 7.310 61.643 63.093 9.377 1.788 0.451 C22 JJ1 19 JJ1 O O O 0 1 N N N 9.117 56.983 62.758 4.371 1.197 -1.056 O JJ1 20 JJ1 C7 C7 C 0 1 N N S 7.591 52.826 61.677 -0.397 0.897 -0.519 C7 JJ1 21 JJ1 C8 C8 C 0 1 N N N 6.627 53.560 60.630 -0.106 2.398 -0.591 C8 JJ1 22 JJ1 O1 O1 O 0 1 N N N 7.128 54.823 60.401 0.234 2.880 0.711 O1 JJ1 23 JJ1 N2 N2 N 0 1 N N N 7.183 51.417 61.811 -1.589 0.670 0.302 N2 JJ1 24 JJ1 C9 C9 C 0 1 N N N 7.932 50.432 61.280 -2.815 0.751 -0.253 C9 JJ1 25 JJ1 O3 O3 O 0 1 N N N 8.837 50.695 60.478 -2.931 1.011 -1.432 O3 JJ1 26 JJ1 C10 C10 C 0 1 N N N 7.519 49.026 61.599 -4.041 0.517 0.592 C10 JJ1 27 JJ1 C11 C11 C 0 1 N N N 6.456 48.626 60.669 -5.293 0.666 -0.275 C11 JJ1 28 JJ1 C12 C12 C 0 1 N N N 6.694 48.735 59.156 -6.538 0.428 0.583 C12 JJ1 29 JJ1 C13 C13 C 0 1 N N N 5.599 47.873 58.462 -7.790 0.578 -0.283 C13 JJ1 30 JJ1 C14 C14 C 0 1 N N N 5.273 46.373 58.653 -9.035 0.340 0.574 C14 JJ1 31 JJ1 C15 C15 C 0 1 N N N 3.952 45.886 58.117 -10.287 0.490 -0.292 C15 JJ1 32 JJ1 C16 C16 C 0 1 N N N 3.670 44.365 58.211 -11.531 0.252 0.565 C16 JJ1 33 JJ1 C17 C17 C 0 1 N N N 2.469 44.163 57.363 -12.784 0.402 -0.301 C17 JJ1 34 JJ1 C18 C18 C 0 1 N N N 1.902 42.765 57.217 -14.028 0.164 0.556 C18 JJ1 35 JJ1 O2 O2 O 0 1 N N N 0.779 42.806 56.281 -15.198 0.304 -0.253 O2 JJ1 36 JJ1 H1 H1 H 0 1 N N N 9.177 54.542 62.671 2.104 0.758 -1.313 H1 JJ1 37 JJ1 H7 H7 H 0 1 N N N 8.622 52.885 61.299 -0.570 0.512 -1.524 H7 JJ1 38 JJ1 HA HA H 0 1 N N N 7.261 55.404 64.724 3.052 -0.416 1.188 HA JJ1 39 JJ1 H21C H21C H 0 0 N N N 9.077 55.659 66.345 3.136 -1.933 -1.458 H21C JJ1 40 JJ1 H22C H22C H 0 0 N N N 8.966 53.950 65.803 4.042 -2.397 0.002 H22C JJ1 41 JJ1 H31C H31C H 0 0 N N N 10.858 54.386 64.184 1.914 -2.592 1.260 H31C JJ1 42 JJ1 H32C H32C H 0 0 N N N 11.006 56.047 64.852 1.008 -2.127 -0.200 H32C JJ1 43 JJ1 H41C H41C H 0 0 N N N 11.558 55.113 67.114 1.909 -4.108 -1.389 H41C JJ1 44 JJ1 H42C H42C H 0 0 N N N 11.344 53.440 66.493 2.815 -4.573 0.071 H42C JJ1 45 JJ1 H51C H51C H 0 0 N N N 13.411 55.466 65.467 0.687 -4.767 1.330 H51C JJ1 46 JJ1 H52C H52C H 0 0 N N N 13.756 54.121 66.607 -0.219 -4.302 -0.130 H52C JJ1 47 JJ1 HN1 HN1 H 0 1 N N N 14.309 53.582 64.388 -0.119 -6.692 0.132 HN1 JJ1 48 JJ1 HN2 HN2 H 0 1 N N N 13.094 52.625 64.913 0.747 -6.250 -1.217 HN2 JJ1 49 JJ1 H3 H3 H 0 1 N N N 7.908 57.510 65.591 5.631 -1.017 0.686 H3 JJ1 50 JJ1 H191 H191 H 0 0 N N N 9.395 59.504 64.961 6.922 0.383 -1.399 H191 JJ1 51 JJ1 H192 H192 H 0 0 N N N 8.648 59.285 63.342 6.833 1.451 0.022 H192 JJ1 52 JJ1 H201 H201 H 0 0 N N N 6.379 59.543 64.365 7.953 -0.284 1.395 H201 JJ1 53 JJ1 H202 H202 H 0 0 N N N 7.140 59.790 65.974 8.042 -1.352 -0.026 H202 JJ1 54 JJ1 H21 H21 H 0 1 N N N 8.358 61.769 64.974 9.371 0.420 -1.213 H21 JJ1 55 JJ1 H261 H261 H 0 0 N N N 5.270 61.890 64.949 10.490 -0.477 1.482 H261 JJ1 56 JJ1 H262 H262 H 0 0 N N N 6.302 62.035 66.412 10.497 -1.438 -0.017 H262 JJ1 57 JJ1 H221 H221 H 0 0 N N N 8.135 61.109 62.600 8.524 2.358 0.082 H221 JJ1 58 JJ1 H222 H222 H 0 0 N N N 6.350 61.264 62.714 9.338 1.740 1.539 H222 JJ1 59 JJ1 H251 H251 H 0 0 N N N 5.645 64.286 65.577 12.679 -0.312 0.329 H251 JJ1 60 JJ1 H252 H252 H 0 0 N N N 7.417 64.043 65.416 11.865 0.306 -1.129 H252 JJ1 61 JJ1 H241 H241 H 0 0 N N N 5.329 63.726 63.194 11.832 1.626 1.623 H241 JJ1 62 JJ1 H242 H242 H 0 0 N N N 6.508 65.071 63.366 12.795 2.163 0.226 H242 JJ1 63 JJ1 H231 H231 H 0 0 N N N 7.289 63.294 61.703 10.706 3.483 0.427 H231 JJ1 64 JJ1 H232 H232 H 0 0 N N N 8.420 63.494 63.084 10.713 2.522 -1.071 H232 JJ1 65 JJ1 H81C H81C H 0 0 N N N 6.599 52.993 59.688 0.726 2.574 -1.273 H81C JJ1 66 JJ1 H82C H82C H 0 0 N N N 5.611 53.631 61.045 -0.990 2.923 -0.953 H82C JJ1 67 JJ1 H2 H2 H 0 1 N N N 6.342 51.190 62.301 -1.496 0.462 1.245 H2 JJ1 68 JJ1 HB HB H 0 1 N N N 6.570 55.278 59.781 0.432 3.826 0.741 HB JJ1 69 JJ1 H101 H101 H 0 0 N N N 8.381 48.352 61.487 -4.007 -0.489 1.011 H101 JJ1 70 JJ1 H102 H102 H 0 0 N N N 7.145 48.975 62.632 -4.069 1.247 1.401 H102 JJ1 71 JJ1 H111 H111 H 0 0 N N N 6.225 47.572 60.881 -5.327 1.672 -0.694 H111 JJ1 72 JJ1 H112 H112 H 0 0 N N N 5.578 49.247 60.900 -5.264 -0.064 -1.084 H112 JJ1 73 JJ1 H121 H121 H 0 0 N N N 6.610 49.784 58.835 -6.504 -0.577 1.002 H121 JJ1 74 JJ1 H122 H122 H 0 0 N N N 7.694 48.353 58.902 -6.566 1.158 1.392 H122 JJ1 75 JJ1 H131 H131 H 0 0 N N N 4.656 48.389 58.696 -7.824 1.584 -0.703 H131 JJ1 76 JJ1 H132 H132 H 0 0 N N N 5.814 47.971 57.388 -7.761 -0.152 -1.092 H132 JJ1 77 JJ1 H141 H141 H 0 0 N N N 6.066 45.795 58.156 -9.000 -0.665 0.993 H141 JJ1 78 JJ1 H142 H142 H 0 0 N N N 5.290 46.165 59.733 -9.063 1.071 1.383 H142 JJ1 79 JJ1 H151 H151 H 0 0 N N N 3.157 46.405 58.672 -10.321 1.495 -0.711 H151 JJ1 80 JJ1 H152 H152 H 0 0 N N N 3.901 46.167 57.055 -10.258 -0.240 -1.101 H152 JJ1 81 JJ1 H161 H161 H 0 0 N N N 4.522 43.786 57.825 -11.497 -0.753 0.984 H161 JJ1 82 JJ1 H162 H162 H 0 0 N N N 3.467 44.070 59.251 -11.560 0.982 1.374 H162 JJ1 83 JJ1 H171 H171 H 0 0 N N N 1.670 44.794 57.780 -12.818 1.407 -0.720 H171 JJ1 84 JJ1 H172 H172 H 0 0 N N N 2.724 44.515 56.353 -12.755 -0.328 -1.110 H172 JJ1 85 JJ1 H181 H181 H 0 0 N N N 2.680 42.089 56.832 -13.994 -0.841 0.975 H181 JJ1 86 JJ1 H182 H182 H 0 0 N N N 1.554 42.403 58.196 -14.057 0.894 1.365 H182 JJ1 87 JJ1 HC HC H 0 1 N N N 0.416 41.934 56.183 -16.026 0.166 0.226 HC JJ1 88 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal JJ1 O4 C6 DOUB N N 1 JJ1 C6 N1 SING N N 2 JJ1 C6 C7 SING N N 3 JJ1 N1 C1 SING N N 4 JJ1 C1 C2 SING N N 5 JJ1 C1 C SING N N 6 JJ1 C2 C3 SING N N 7 JJ1 C3 C4 SING N N 8 JJ1 C4 C5 SING N N 9 JJ1 C5 N SING N N 10 JJ1 C N3 SING N N 11 JJ1 C O DOUB N N 12 JJ1 N3 C19 SING N N 13 JJ1 C19 C20 SING N N 14 JJ1 C20 C21 SING N N 15 JJ1 C21 C26 SING N N 16 JJ1 C21 C22 SING N N 17 JJ1 C26 C25 SING N N 18 JJ1 C25 C24 SING N N 19 JJ1 C24 C23 SING N N 20 JJ1 C23 C22 SING N N 21 JJ1 C7 C8 SING N N 22 JJ1 C7 N2 SING N N 23 JJ1 C8 O1 SING N N 24 JJ1 N2 C9 SING N N 25 JJ1 C9 O3 DOUB N N 26 JJ1 C9 C10 SING N N 27 JJ1 C10 C11 SING N N 28 JJ1 C11 C12 SING N N 29 JJ1 C12 C13 SING N N 30 JJ1 C13 C14 SING N N 31 JJ1 C14 C15 SING N N 32 JJ1 C15 C16 SING N N 33 JJ1 C16 C17 SING N N 34 JJ1 C17 C18 SING N N 35 JJ1 C18 O2 SING N N 36 JJ1 N1 H1 SING N N 37 JJ1 C7 H7 SING N N 38 JJ1 C1 HA SING N N 39 JJ1 C2 H21C SING N N 40 JJ1 C2 H22C SING N N 41 JJ1 C3 H31C SING N N 42 JJ1 C3 H32C SING N N 43 JJ1 C4 H41C SING N N 44 JJ1 C4 H42C SING N N 45 JJ1 C5 H51C SING N N 46 JJ1 C5 H52C SING N N 47 JJ1 N HN1 SING N N 48 JJ1 N HN2 SING N N 49 JJ1 N3 H3 SING N N 50 JJ1 C19 H191 SING N N 51 JJ1 C19 H192 SING N N 52 JJ1 C20 H201 SING N N 53 JJ1 C20 H202 SING N N 54 JJ1 C21 H21 SING N N 55 JJ1 C26 H261 SING N N 56 JJ1 C26 H262 SING N N 57 JJ1 C22 H221 SING N N 58 JJ1 C22 H222 SING N N 59 JJ1 C25 H251 SING N N 60 JJ1 C25 H252 SING N N 61 JJ1 C24 H241 SING N N 62 JJ1 C24 H242 SING N N 63 JJ1 C23 H231 SING N N 64 JJ1 C23 H232 SING N N 65 JJ1 C8 H81C SING N N 66 JJ1 C8 H82C SING N N 67 JJ1 N2 H2 SING N N 68 JJ1 O1 HB SING N N 69 JJ1 C10 H101 SING N N 70 JJ1 C10 H102 SING N N 71 JJ1 C11 H111 SING N N 72 JJ1 C11 H112 SING N N 73 JJ1 C12 H121 SING N N 74 JJ1 C12 H122 SING N N 75 JJ1 C13 H131 SING N N 76 JJ1 C13 H132 SING N N 77 JJ1 C14 H141 SING N N 78 JJ1 C14 H142 SING N N 79 JJ1 C15 H151 SING N N 80 JJ1 C15 H152 SING N N 81 JJ1 C16 H161 SING N N 82 JJ1 C16 H162 SING N N 83 JJ1 C17 H171 SING N N 84 JJ1 C17 H172 SING N N 85 JJ1 C18 H181 SING N N 86 JJ1 C18 H182 SING N N 87 JJ1 O2 HC SING N N 88 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor JJ1 SMILES ACDLabs 12.01 "O=C(NC(C(=O)NC(C(=O)NCCC1CCCCC1)CCCCN)CO)CCCCCCCCCO" JJ1 InChI InChI 1.03 "InChI=1S/C27H52N4O5/c28-18-11-10-15-23(26(35)29-19-17-22-13-7-6-8-14-22)31-27(36)24(21-33)30-25(34)16-9-4-2-1-3-5-12-20-32/h22-24,32-33H,1-21,28H2,(H,29,35)(H,30,34)(H,31,36)/t23-,24-/m0/s1" JJ1 InChIKey InChI 1.03 WOFDCVFMMXKBIZ-ZEQRLZLVSA-N JJ1 SMILES_CANONICAL CACTVS 3.385 "NCCCC[C@H](NC(=O)[C@H](CO)NC(=O)CCCCCCCCCO)C(=O)NCCC1CCCCC1" JJ1 SMILES CACTVS 3.385 "NCCCC[CH](NC(=O)[CH](CO)NC(=O)CCCCCCCCCO)C(=O)NCCC1CCCCC1" JJ1 SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "C1CCC(CC1)CCNC(=O)[C@H](CCCCN)NC(=O)[C@H](CO)NC(=O)CCCCCCCCCO" JJ1 SMILES "OpenEye OEToolkits" 1.9.2 "C1CCC(CC1)CCNC(=O)C(CCCCN)NC(=O)C(CO)NC(=O)CCCCCCCCCO" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier JJ1 "SYSTEMATIC NAME" ACDLabs 12.01 "N-(10-hydroxydecanoyl)-L-seryl-N-(2-cyclohexylethyl)-L-lysinamide" JJ1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "N-[(2S)-1-[[(2S)-6-azanyl-1-(2-cyclohexylethylamino)-1-oxidanylidene-hexan-2-yl]amino]-3-oxidanyl-1-oxidanylidene-propan-2-yl]-10-oxidanyl-decanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site JJ1 "Create component" 2013-09-20 EBI JJ1 "Modify descriptor" 2014-09-05 RCSB JJ1 "Initial release" 2014-09-24 RCSB #