data_JN9 # _chem_comp.id JN9 _chem_comp.name "1-[(5R,8R,15S,18S)-15-(4-azanylbutyl)-5-(cyclohexylmethyl)-18-(1H-indol-3-ylmethyl)-4,7,14,17,20-pentakis(oxidanylidene)-3,6,13,16,19-pentazabicyclo[20.3.1]hexacosa-1(25),22(26),23-trien-8-yl]guanidine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C42 H60 N10 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ;(2R,3S,4R,5R,6R)-6-((1R,2R,3S,4R,6S)-4,6-DIAMINO-2,3-DIHYDROXYCYCLOHEXYLOXY)-5-AMINO-2-(AMINOMETHYL)-TETRAHYDRO-2H-PYRA N-3,4-DIOL; NEOMYCIN A; NEAMINE; (1R,2R,3S,4R,6S)-4,6-diamino-2,3-dihydroxycyclohexyl 2,6-diamino-2,6-dideoxy-alpha-D-glucoside; (1R,2R,3S,4R,6S)-4,6-diamino-2,3-dihydroxycyclohexyl 2,6-diamino-2,6-dideoxy-D-glucoside; (1R,2R,3S,4R,6S)-4,6-diamino-2,3-dihydroxycyclohexyl 2,6-diamino-2,6-dideoxy-glucoside ; _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-05-06 _chem_comp.pdbx_modified_date 2023-03-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 784.990 _chem_comp.one_letter_code ? _chem_comp.three_letter_code JN9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7ZUM _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal JN9 N1 N1 N 0 1 N N N 5.159 -10.273 2.510 -5.167 -3.788 -2.308 N1 JN9 1 JN9 C7 C1 C 0 1 N N N -1.114 -14.412 3.361 2.719 -2.864 -0.887 C7 JN9 2 JN9 C8 C2 C 0 1 N N S -1.940 -13.399 2.572 3.934 -1.993 -1.083 C8 JN9 3 JN9 N2 N2 N 0 1 N N N 6.396 -9.796 4.549 -6.399 -5.497 -1.336 N2 JN9 4 JN9 C9 C3 C 0 1 N N N -2.768 -14.155 1.519 5.086 -2.525 -0.229 C9 JN9 5 JN9 O1 O1 O 0 1 N N N 6.657 -15.853 1.251 -5.298 0.624 -1.889 O1 JN9 6 JN9 C1 C4 C 0 1 N N R 3.837 -12.374 4.046 -3.239 -3.804 -0.329 C1 JN9 7 JN9 C5 C5 C 0 1 N N N 0.976 -14.329 5.895 0.304 -3.800 0.184 C5 JN9 8 JN9 C6 C6 C 0 1 N N N -0.297 -15.104 5.542 1.555 -4.681 0.201 C6 JN9 9 JN9 N3 N3 N 0 1 N N N -1.168 -14.316 4.681 2.748 -3.818 0.085 N3 JN9 10 JN9 C4 C7 C 0 1 N N N 1.789 -13.876 4.698 -0.865 -4.576 -0.425 C4 JN9 11 JN9 O4 O2 O 0 1 N N N -0.457 -15.290 2.794 1.734 -2.714 -1.578 O4 JN9 12 JN9 C3 C8 C 0 1 N N N 2.944 -12.940 5.148 -2.096 -4.431 0.472 C3 JN9 13 JN9 O3 O3 O 0 1 N N N -1.847 -10.686 3.255 3.649 -0.021 -2.835 O3 JN9 14 JN9 C2 C9 C 0 1 N N N 5.461 -10.447 3.911 -5.316 -4.648 -1.340 C2 JN9 15 JN9 N4 N4 N 0 1 N N N -6.873 -11.185 0.824 9.878 -1.953 0.859 N4 JN9 16 JN9 N N5 N 0 1 N N N 4.778 -11.404 4.595 -4.392 -4.708 -0.324 N JN9 17 JN9 C C10 C 0 1 N N N 4.628 -13.528 3.446 -3.629 -2.488 0.296 C JN9 18 JN9 O O4 O 0 1 N N N 4.116 -14.265 2.618 -3.432 -2.278 1.474 O JN9 19 JN9 C10 C11 C 0 1 N N N -3.599 -13.207 0.634 6.353 -1.718 -0.522 C10 JN9 20 JN9 C11 C12 C 0 1 N N N -4.811 -12.549 1.310 7.505 -2.250 0.332 C11 JN9 21 JN9 C12 C13 C 0 1 N N N -5.577 -11.682 0.322 8.772 -1.442 0.039 C12 JN9 22 JN9 C13 C14 C 0 1 N N N -1.149 -11.085 2.322 3.513 0.308 -1.676 C13 JN9 23 JN9 C14 C15 C 0 1 N N S -0.298 -10.095 1.517 3.227 1.743 -1.313 C14 JN9 24 JN9 C15 C16 C 0 1 N N N -1.190 -8.990 0.854 2.513 1.797 0.039 C15 JN9 25 JN9 C16 C17 C 0 1 Y N N -0.433 -8.016 0.010 3.397 1.192 1.099 C16 JN9 26 JN9 C17 C18 C 0 1 Y N N 0.437 -8.301 -1.006 3.124 0.107 1.842 C17 JN9 27 JN9 C18 C19 C 0 1 Y N N 0.610 -6.103 -0.694 5.153 0.795 2.522 C18 JN9 28 JN9 C19 C20 C 0 1 Y N N -0.360 -6.588 0.201 4.718 1.671 1.510 C19 JN9 29 JN9 C20 C21 C 0 1 Y N N -1.013 -5.692 1.033 5.532 2.734 1.113 C20 JN9 30 JN9 C21 C22 C 0 1 Y N N -0.672 -4.347 0.996 6.748 2.918 1.709 C21 JN9 31 JN9 C22 C23 C 0 1 Y N N 0.309 -3.886 0.131 7.181 2.056 2.707 C22 JN9 32 JN9 C23 C24 C 0 1 Y N N 0.958 -4.756 -0.730 6.394 1.001 3.115 C23 JN9 33 JN9 C24 C25 C 0 1 N N N 1.819 -10.928 0.515 1.525 3.327 -1.935 C24 JN9 34 JN9 C25 C26 C 0 1 N N N 2.395 -11.495 -0.770 0.611 3.976 -2.944 C25 JN9 35 JN9 C26 C27 C 0 1 Y N N 3.895 -11.361 -0.917 -0.670 4.375 -2.257 C26 JN9 36 JN9 C27 C28 C 0 1 Y N N 4.734 -12.395 -0.507 -1.775 3.547 -2.312 C27 JN9 37 JN9 C28 C29 C 0 1 Y N N 6.118 -12.283 -0.573 -2.944 3.911 -1.670 C28 JN9 38 JN9 C29 C30 C 0 1 N N N 6.983 -13.456 -0.159 -4.151 3.010 -1.727 C29 JN9 39 JN9 C30 C31 C 0 1 N N N 6.802 -14.802 1.881 -4.670 0.812 -0.869 C30 JN9 40 JN9 C31 C32 C 0 1 N N R 6.723 -14.769 3.407 -4.571 -0.271 0.177 C31 JN9 41 JN9 C32 C33 C 0 1 N N N 8.135 -14.600 3.982 -5.919 -0.428 0.885 C32 JN9 42 JN9 C33 C34 C 0 1 N N N 8.224 -14.664 5.508 -6.235 0.846 1.669 C33 JN9 43 JN9 C34 C35 C 0 1 N N N 8.424 -16.095 5.982 -7.642 0.745 2.261 C34 JN9 44 JN9 C35 C36 C 0 1 N N N 8.589 -16.166 7.495 -7.959 2.020 3.046 C35 JN9 45 JN9 C36 C37 C 0 1 N N N 9.776 -15.347 7.948 -6.941 2.188 4.176 C36 JN9 46 JN9 C37 C38 C 0 1 N N N 9.608 -13.904 7.518 -5.534 2.290 3.584 C37 JN9 47 JN9 C38 C39 C 0 1 N N N 9.378 -13.796 6.013 -5.218 1.015 2.800 C38 JN9 48 JN9 C39 C40 C 0 1 Y N N 6.666 -11.103 -1.049 -3.009 5.107 -0.979 C39 JN9 49 JN9 C40 C41 C 0 1 Y N N 5.849 -10.072 -1.479 -1.907 5.940 -0.933 C40 JN9 50 JN9 C41 C42 C 0 1 Y N N 4.470 -10.202 -1.422 -0.737 5.573 -1.571 C41 JN9 51 JN9 N5 N6 N 0 1 N N N -1.092 -12.381 1.958 3.615 -0.613 -0.676 N5 JN9 52 JN9 N6 N7 N 0 1 Y N N 1.070 -7.164 -1.424 4.163 -0.147 2.695 N6 JN9 53 JN9 N7 N8 N 0 1 N N N 0.491 -10.776 0.507 2.363 2.334 -2.359 N7 JN9 54 JN9 N8 N9 N 0 1 N N N 7.033 -13.621 1.286 -4.044 2.002 -0.653 N8 JN9 55 JN9 N9 N10 N 0 1 N N N 5.886 -13.667 3.875 -4.210 -1.539 -0.498 N9 JN9 56 JN9 O2 O5 O 0 1 N N N 2.523 -10.660 1.488 1.516 3.678 -0.774 O2 JN9 57 JN9 H1 H1 H 0 1 N N N 4.451 -10.907 2.198 -4.403 -3.190 -2.312 H1 JN9 58 JN9 H2 H2 H 0 1 N N N -2.639 -12.911 3.267 4.224 -2.005 -2.134 H2 JN9 59 JN9 H3 H3 H 0 1 N N N 6.588 -10.008 5.507 -7.051 -5.455 -2.053 H3 JN9 60 JN9 H4 H4 H 0 1 N N N 6.920 -9.085 4.079 -6.510 -6.137 -0.616 H4 JN9 61 JN9 H5 H5 H 0 1 N N N -3.451 -14.845 2.036 4.831 -2.429 0.826 H5 JN9 62 JN9 H6 H6 H 0 1 N N N -2.084 -14.729 0.877 5.261 -3.574 -0.467 H6 JN9 63 JN9 H7 H7 H 0 1 N N N 3.213 -11.909 3.268 -2.914 -3.636 -1.356 H7 JN9 64 JN9 H8 H8 H 0 1 N N N 1.611 -14.977 6.516 0.053 -3.507 1.203 H8 JN9 65 JN9 H9 H9 H 0 1 N N N 0.687 -13.438 6.471 0.496 -2.909 -0.413 H9 JN9 66 JN9 H10 H10 H 0 1 N N N -0.836 -15.351 6.469 1.597 -5.237 1.137 H10 JN9 67 JN9 H11 H11 H 0 1 N N N -0.020 -16.032 5.020 1.524 -5.376 -0.638 H11 JN9 68 JN9 H12 H12 H 0 1 N N N -1.824 -13.686 5.097 3.513 -3.926 0.671 H12 JN9 69 JN9 H13 H13 H 0 1 N N N 1.134 -13.333 4.000 -1.088 -4.180 -1.415 H13 JN9 70 JN9 H14 H14 H 0 1 N N N 2.213 -14.757 4.194 -0.598 -5.630 -0.507 H14 JN9 71 JN9 H15 H15 H 0 1 N N N 3.585 -13.509 5.837 -1.855 -3.793 1.321 H15 JN9 72 JN9 H16 H16 H 0 1 N N N 2.495 -12.090 5.683 -2.402 -5.414 0.831 H16 JN9 73 JN9 H17 H17 H 0 1 N N N -7.312 -10.627 0.120 10.018 -2.940 0.704 H17 JN9 74 JN9 H18 H18 H 0 1 N N N -7.463 -11.961 1.050 10.727 -1.436 0.683 H18 JN9 75 JN9 H20 H20 H 0 1 N N N 4.938 -11.447 5.581 -4.504 -5.348 0.396 H20 JN9 76 JN9 H21 H21 H 0 1 N N N -3.966 -13.785 -0.227 6.608 -1.814 -1.577 H21 JN9 77 JN9 H22 H22 H 0 1 N N N -2.933 -12.405 0.281 6.178 -0.669 -0.285 H22 JN9 78 JN9 H23 H23 H 0 1 N N N -4.462 -11.923 2.144 7.250 -2.154 1.387 H23 JN9 79 JN9 H24 H24 H 0 1 N N N -5.479 -13.334 1.695 7.680 -3.299 0.094 H24 JN9 80 JN9 H25 H25 H 0 1 N N N -5.764 -12.277 -0.584 8.597 -0.393 0.277 H25 JN9 81 JN9 H26 H26 H 0 1 N N N -4.951 -10.814 0.068 9.027 -1.538 -1.016 H26 JN9 82 JN9 H27 H27 H 0 1 N N N 0.383 -9.590 2.218 4.163 2.298 -1.254 H27 JN9 83 JN9 H28 H28 H 0 1 N N N -1.698 -8.431 1.654 2.298 2.835 0.295 H28 JN9 84 JN9 H29 H29 H 0 1 N N N -1.939 -9.486 0.220 1.580 1.237 -0.020 H29 JN9 85 JN9 H30 H30 H 0 1 N N N 0.601 -9.285 -1.420 2.219 -0.478 1.776 H30 JN9 86 JN9 H31 H31 H 0 1 N N N -1.783 -6.039 1.706 5.202 3.408 0.336 H31 JN9 87 JN9 H32 H32 H 0 1 N N N -1.177 -3.651 1.649 7.377 3.740 1.401 H32 JN9 88 JN9 H33 H33 H 0 1 N N N 0.570 -2.838 0.129 8.144 2.213 3.168 H33 JN9 89 JN9 H34 H34 H 0 1 N N N 1.715 -4.398 -1.412 6.739 0.336 3.893 H34 JN9 90 JN9 H35 H35 H 0 1 N N N 1.922 -10.973 -1.615 1.094 4.861 -3.358 H35 JN9 91 JN9 H36 H36 H 0 1 N N N 2.143 -12.565 -0.813 0.393 3.271 -3.746 H36 JN9 92 JN9 H37 H37 H 0 1 N N N 4.298 -13.307 -0.128 -1.725 2.616 -2.858 H37 JN9 93 JN9 H38 H38 H 0 1 N N N 6.573 -14.374 -0.606 -5.056 3.600 -1.585 H38 JN9 94 JN9 H39 H39 H 0 1 N N N 8.005 -13.291 -0.532 -4.188 2.509 -2.695 H39 JN9 95 JN9 H40 H40 H 0 1 N N N 6.310 -15.725 3.761 -3.802 -0.010 0.904 H40 JN9 96 JN9 H41 H41 H 0 1 N N N 8.769 -15.399 3.569 -6.699 -0.602 0.144 H41 JN9 97 JN9 H42 H42 H 0 1 N N N 8.520 -13.622 3.659 -5.872 -1.275 1.570 H42 JN9 98 JN9 H43 H43 H 0 1 N N N 7.284 -14.280 5.931 -6.182 1.707 1.002 H43 JN9 99 JN9 H44 H44 H 0 1 N N N 7.549 -16.694 5.690 -8.367 0.625 1.456 H44 JN9 100 JN9 H45 H45 H 0 1 N N N 9.326 -16.507 5.505 -7.695 -0.115 2.928 H45 JN9 101 JN9 H46 H46 H 0 1 N N N 7.679 -15.777 7.975 -7.906 2.880 2.378 H46 JN9 102 JN9 H47 H47 H 0 1 N N N 8.741 -17.214 7.792 -8.961 1.948 3.467 H47 JN9 103 JN9 H48 H48 H 0 1 N N N 9.853 -15.393 9.044 -7.167 3.097 4.735 H48 JN9 104 JN9 H49 H49 H 0 1 N N N 10.693 -15.756 7.499 -6.994 1.328 4.844 H49 JN9 105 JN9 H50 H50 H 0 1 N N N 10.517 -13.343 7.783 -5.481 3.150 2.917 H50 JN9 106 JN9 H51 H51 H 0 1 N N N 8.744 -13.472 8.044 -4.809 2.410 4.390 H51 JN9 107 JN9 H52 H52 H 0 1 N N N 10.299 -14.106 5.497 -5.270 0.155 3.467 H52 JN9 108 JN9 H53 H53 H 0 1 N N N 9.157 -12.746 5.769 -4.215 1.087 2.378 H53 JN9 109 JN9 H54 H54 H 0 1 N N N 7.739 -10.987 -1.085 -3.921 5.390 -0.474 H54 JN9 110 JN9 H55 H55 H 0 1 N N N 6.288 -9.162 -1.861 -1.960 6.878 -0.400 H55 JN9 111 JN9 H56 H56 H 0 1 N N N 3.840 -9.398 -1.772 0.125 6.222 -1.532 H56 JN9 112 JN9 H57 H57 H 0 1 N N N -0.448 -12.655 1.244 3.483 -0.372 0.254 H57 JN9 113 JN9 H58 H58 H 0 1 N N N 1.759 -7.116 -2.147 4.197 -0.879 3.330 H58 JN9 114 JN9 H59 H59 H 0 1 N N N -0.005 -11.168 -0.267 2.390 2.037 -3.282 H59 JN9 115 JN9 H60 H60 H 0 1 N N N 7.247 -12.827 1.855 -3.553 2.179 0.165 H60 JN9 116 JN9 H61 H61 H 0 1 N N N 6.260 -13.007 4.526 -4.375 -1.686 -1.442 H61 JN9 117 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal JN9 C40 C41 DOUB Y N 1 JN9 C40 C39 SING Y N 2 JN9 N6 C17 SING Y N 3 JN9 N6 C18 SING Y N 4 JN9 C41 C26 SING Y N 5 JN9 C39 C28 DOUB Y N 6 JN9 C17 C16 DOUB Y N 7 JN9 C26 C25 SING N N 8 JN9 C26 C27 DOUB Y N 9 JN9 C25 C24 SING N N 10 JN9 C23 C18 DOUB Y N 11 JN9 C23 C22 SING Y N 12 JN9 C18 C19 SING Y N 13 JN9 C28 C27 SING Y N 14 JN9 C28 C29 SING N N 15 JN9 C29 N8 SING N N 16 JN9 C16 C19 SING Y N 17 JN9 C16 C15 SING N N 18 JN9 C22 C21 DOUB Y N 19 JN9 C19 C20 DOUB Y N 20 JN9 C12 N4 SING N N 21 JN9 C12 C11 SING N N 22 JN9 N7 C24 SING N N 23 JN9 N7 C14 SING N N 24 JN9 C24 O2 DOUB N N 25 JN9 C10 C11 SING N N 26 JN9 C10 C9 SING N N 27 JN9 C15 C14 SING N N 28 JN9 C21 C20 SING Y N 29 JN9 O1 C30 DOUB N N 30 JN9 N8 C30 SING N N 31 JN9 C14 C13 SING N N 32 JN9 C9 C8 SING N N 33 JN9 C30 C31 SING N N 34 JN9 N5 C13 SING N N 35 JN9 N5 C8 SING N N 36 JN9 C13 O3 DOUB N N 37 JN9 N1 C2 DOUB N N 38 JN9 C8 C7 SING N N 39 JN9 O C DOUB N N 40 JN9 O4 C7 DOUB N N 41 JN9 C7 N3 SING N N 42 JN9 C31 N9 SING N N 43 JN9 C31 C32 SING N N 44 JN9 C N9 SING N N 45 JN9 C C1 SING N N 46 JN9 C2 N2 SING N N 47 JN9 C2 N SING N N 48 JN9 C32 C33 SING N N 49 JN9 C1 N SING N N 50 JN9 C1 C3 SING N N 51 JN9 N3 C6 SING N N 52 JN9 C4 C3 SING N N 53 JN9 C4 C5 SING N N 54 JN9 C33 C34 SING N N 55 JN9 C33 C38 SING N N 56 JN9 C6 C5 SING N N 57 JN9 C34 C35 SING N N 58 JN9 C38 C37 SING N N 59 JN9 C35 C36 SING N N 60 JN9 C37 C36 SING N N 61 JN9 N1 H1 SING N N 62 JN9 C8 H2 SING N N 63 JN9 N2 H3 SING N N 64 JN9 N2 H4 SING N N 65 JN9 C9 H5 SING N N 66 JN9 C9 H6 SING N N 67 JN9 C1 H7 SING N N 68 JN9 C5 H8 SING N N 69 JN9 C5 H9 SING N N 70 JN9 C6 H10 SING N N 71 JN9 C6 H11 SING N N 72 JN9 N3 H12 SING N N 73 JN9 C4 H13 SING N N 74 JN9 C4 H14 SING N N 75 JN9 C3 H15 SING N N 76 JN9 C3 H16 SING N N 77 JN9 N4 H17 SING N N 78 JN9 N4 H18 SING N N 79 JN9 N H20 SING N N 80 JN9 C10 H21 SING N N 81 JN9 C10 H22 SING N N 82 JN9 C11 H23 SING N N 83 JN9 C11 H24 SING N N 84 JN9 C12 H25 SING N N 85 JN9 C12 H26 SING N N 86 JN9 C14 H27 SING N N 87 JN9 C15 H28 SING N N 88 JN9 C15 H29 SING N N 89 JN9 C17 H30 SING N N 90 JN9 C20 H31 SING N N 91 JN9 C21 H32 SING N N 92 JN9 C22 H33 SING N N 93 JN9 C23 H34 SING N N 94 JN9 C25 H35 SING N N 95 JN9 C25 H36 SING N N 96 JN9 C27 H37 SING N N 97 JN9 C29 H38 SING N N 98 JN9 C29 H39 SING N N 99 JN9 C31 H40 SING N N 100 JN9 C32 H41 SING N N 101 JN9 C32 H42 SING N N 102 JN9 C33 H43 SING N N 103 JN9 C34 H44 SING N N 104 JN9 C34 H45 SING N N 105 JN9 C35 H46 SING N N 106 JN9 C35 H47 SING N N 107 JN9 C36 H48 SING N N 108 JN9 C36 H49 SING N N 109 JN9 C37 H50 SING N N 110 JN9 C37 H51 SING N N 111 JN9 C38 H52 SING N N 112 JN9 C38 H53 SING N N 113 JN9 C39 H54 SING N N 114 JN9 C40 H55 SING N N 115 JN9 C41 H56 SING N N 116 JN9 N5 H57 SING N N 117 JN9 N6 H58 SING N N 118 JN9 N7 H59 SING N N 119 JN9 N8 H60 SING N N 120 JN9 N9 H61 SING N N 121 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor JN9 InChI InChI 1.06 "InChI=1S/C42H60N10O5/c43-19-8-6-17-33-38(54)46-20-9-7-18-34(52-42(44)45)40(56)51-35(22-27-11-2-1-3-12-27)39(55)48-25-29-14-10-13-28(21-29)23-37(53)49-36(41(57)50-33)24-30-26-47-32-16-5-4-15-31(30)32/h4-5,10,13-16,21,26-27,33-36,47H,1-3,6-9,11-12,17-20,22-25,43H2,(H,46,54)(H,48,55)(H,49,53)(H,50,57)(H,51,56)(H4,44,45,52)/t33-,34+,35+,36-/m0/s1" JN9 InChIKey InChI 1.06 FYPRNDPBQZMJGG-NZKHRDNMSA-N JN9 SMILES_CANONICAL CACTVS 3.385 "NCCCC[C@@H]1NC(=O)[C@H](Cc2c[nH]c3ccccc23)NC(=O)Cc4cccc(CNC(=O)[C@@H](CC5CCCCC5)NC(=O)[C@@H](CCCCNC1=O)NC(N)=N)c4" JN9 SMILES CACTVS 3.385 "NCCCC[CH]1NC(=O)[CH](Cc2c[nH]c3ccccc23)NC(=O)Cc4cccc(CNC(=O)[CH](CC5CCCCC5)NC(=O)[CH](CCCCNC1=O)NC(N)=N)c4" JN9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[H]/N=C(/N)\N[C@@H]1CCCCNC(=O)[C@@H](NC(=O)[C@@H](NC(=O)Cc2cccc(c2)CNC(=O)[C@H](NC1=O)CC3CCCCC3)Cc4c[nH]c5c4cccc5)CCCCN" JN9 SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)c(c[nH]2)CC3C(=O)NC(C(=O)NCCCCC(C(=O)NC(C(=O)NCc4cccc(c4)CC(=O)N3)CC5CCCCC5)NC(=N)N)CCCCN" # _pdbx_chem_comp_identifier.comp_id JN9 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "1-[(5~{R},8~{R},15~{S},18~{S})-15-(4-azanylbutyl)-5-(cyclohexylmethyl)-18-(1~{H}-indol-3-ylmethyl)-4,7,14,17,20-pentakis(oxidanylidene)-3,6,13,16,19-pentazabicyclo[20.3.1]hexacosa-1(25),22(26),23-trien-8-yl]guanidine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site JN9 "Create component" 2022-05-16 PDBE JN9 "Modify descriptor" 2022-08-22 RCSB JN9 "Initial release" 2023-03-22 RCSB #