data_JOU # _chem_comp.id JOU _chem_comp.name "(2R,5R)-2-[(1S)-1-[2-(cyanomethylsulfanyl)ethanoylamino]-1-methoxy-2-oxidanyl-2-oxidanylidene-ethyl]-5-[(1-methyl-1,2,3,4-tetrazol-5-yl)sulfanylmethyl]-5,6-dihydro-2H-1,3-thiazine-4-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H19 N7 O6 S3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "hydrolysed cefmetazole" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-05-06 _chem_comp.pdbx_modified_date 2023-03-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 489.550 _chem_comp.one_letter_code ? _chem_comp.three_letter_code JOU _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7ZO7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal JOU C02 C1 C 0 1 N N N -21.496 26.137 1.541 -1.750 0.297 1.268 C02 JOU 1 JOU C04 C2 C 0 1 N N N -20.245 25.584 0.938 -1.130 -0.654 0.314 C04 JOU 2 JOU C06 C3 C 0 1 N N R -19.266 24.804 -1.428 1.015 -1.456 -0.505 C06 JOU 3 JOU C07 C4 C 0 1 N N S -18.453 26.042 -2.024 2.168 -1.984 0.352 C07 JOU 4 JOU C09 C5 C 0 1 N N N -16.762 24.498 -3.150 3.408 0.112 0.265 C09 JOU 5 JOU C10 C6 C 0 1 N N N -15.280 24.152 -3.345 4.102 1.267 0.939 C10 JOU 6 JOU C12 C7 C 0 1 N N N -14.392 25.338 -0.643 5.540 3.701 0.670 C12 JOU 7 JOU C13 C8 C 0 1 N N N -14.240 23.932 -0.066 6.125 4.712 -0.225 C13 JOU 8 JOU C17 C9 C 0 1 N N N -18.713 27.585 -3.837 2.632 -3.321 2.286 C17 JOU 9 JOU C18 C10 C 0 1 N N N -18.370 27.177 -1.009 3.150 -2.718 -0.524 C18 JOU 10 JOU C22 C11 C 0 1 N N N -18.035 24.180 0.896 -1.437 -2.032 -1.751 C22 JOU 11 JOU C23 C12 C 0 1 N N R -19.352 24.584 1.734 -2.099 -1.434 -0.507 C23 JOU 12 JOU C24 C13 C 0 1 N N N -20.184 23.393 1.967 -3.239 -0.513 -0.944 C24 JOU 13 JOU C26 C14 C 0 1 Y N N -20.901 21.109 3.527 -5.445 0.963 -0.274 C26 JOU 14 JOU C31 C15 C 0 1 N N N -20.335 19.476 1.673 -6.825 1.550 1.761 C31 JOU 15 JOU N05 N1 N 0 1 N N N -20.334 25.359 -0.680 0.115 -0.666 0.324 N05 JOU 16 JOU N08 N2 N 0 1 N N N -17.080 25.638 -2.312 2.843 -0.861 1.007 N08 JOU 17 JOU N14 N3 N 0 1 N N N -14.115 22.906 0.395 6.577 5.492 -0.916 N14 JOU 18 JOU N27 N4 N 0 1 Y N N -21.903 21.173 4.461 -5.509 1.268 -1.552 N27 JOU 19 JOU N28 N5 N 0 1 Y N N -22.697 20.089 4.288 -6.510 2.039 -1.780 N28 JOU 20 JOU N29 N6 N 0 1 Y N N -22.242 19.369 3.286 -7.149 2.280 -0.686 N29 JOU 21 JOU N30 N7 N 0 1 Y N N -21.135 19.971 2.785 -6.479 1.587 0.338 N30 JOU 22 JOU O01 O1 O 0 1 N N N -21.635 26.072 2.789 -1.918 1.587 0.920 O01 JOU 23 JOU O03 O2 O 0 1 N N N -22.374 26.633 0.748 -2.110 -0.089 2.361 O03 JOU 24 JOU O15 O3 O 0 1 N N N -17.631 23.840 -3.648 3.358 0.058 -0.946 O15 JOU 25 JOU O16 O4 O 0 1 N N N -19.157 26.411 -3.173 1.655 -2.876 1.343 O16 JOU 26 JOU O19 O5 O 0 1 N N N -19.208 28.121 -0.957 3.319 -3.906 -0.379 O19 JOU 27 JOU O20 O6 O 0 1 N N N -17.406 27.167 -0.191 3.837 -2.053 -1.466 O20 JOU 28 JOU S11 S1 S 0 1 N N N -14.222 25.356 -2.462 4.754 2.399 -0.319 S11 JOU 29 JOU S21 S2 S 0 1 N N N -18.347 23.564 -0.483 0.101 -2.856 -1.221 S21 JOU 30 JOU S25 S3 S 0 1 N N N -19.556 22.335 3.310 -4.243 -0.071 0.496 S25 JOU 31 JOU H061 H2 H 0 0 N N N -19.679 24.253 -2.286 1.413 -0.833 -1.306 H061 JOU 32 JOU H101 H3 H 0 0 N N N -15.088 23.143 -2.950 3.392 1.798 1.573 H101 JOU 33 JOU H102 H4 H 0 0 N N N -15.040 24.177 -4.418 4.923 0.891 1.550 H102 JOU 34 JOU H121 H5 H 0 0 N N N -13.617 25.986 -0.208 6.325 3.264 1.287 H121 JOU 35 JOU H122 H6 H 0 0 N N N -15.386 25.726 -0.376 4.793 4.171 1.310 H122 JOU 36 JOU H172 H7 H 0 0 N N N -19.343 27.768 -4.720 2.147 -3.923 3.055 H172 JOU 37 JOU H171 H8 H 0 0 N N N -18.784 28.443 -3.152 3.383 -3.922 1.775 H171 JOU 38 JOU H173 H9 H 0 0 N N N -17.668 27.454 -4.153 3.110 -2.457 2.749 H173 JOU 39 JOU H222 H10 H 0 0 N N N -17.461 23.448 1.482 -2.106 -2.759 -2.212 H222 JOU 40 JOU H221 H11 H 0 0 N N N -17.428 25.085 0.744 -1.205 -1.240 -2.463 H221 JOU 41 JOU H231 H12 H 0 0 N N N -19.044 25.040 2.687 -2.509 -2.241 0.100 H231 JOU 42 JOU H241 H13 H 0 0 N N N -21.201 23.722 2.227 -2.825 0.392 -1.389 H241 JOU 43 JOU H242 H14 H 0 0 N N N -20.215 22.801 1.040 -3.861 -1.026 -1.677 H242 JOU 44 JOU H311 H15 H 0 0 N N N -20.767 18.536 1.300 -7.505 0.719 1.947 H311 JOU 45 JOU H313 H16 H 0 0 N N N -20.329 20.223 0.865 -5.918 1.418 2.351 H313 JOU 46 JOU H312 H17 H 0 0 N N N -19.305 19.296 2.014 -7.308 2.486 2.042 H312 JOU 47 JOU H081 H20 H 0 0 N N N -16.330 26.168 -1.916 2.883 -0.818 1.975 H081 JOU 48 JOU H4 H21 H 0 1 N N N -22.475 26.442 3.034 -2.326 2.169 1.576 H4 JOU 49 JOU H5 H22 H 0 1 N N N -17.465 27.926 0.378 4.455 -2.567 -2.004 H5 JOU 50 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal JOU C17 O16 SING N N 1 JOU O15 C09 DOUB N N 2 JOU C10 C09 SING N N 3 JOU C10 S11 SING N N 4 JOU O16 C07 SING N N 5 JOU C09 N08 SING N N 6 JOU S11 C12 SING N N 7 JOU N08 C07 SING N N 8 JOU C07 C06 SING N N 9 JOU C07 C18 SING N N 10 JOU C06 N05 SING N N 11 JOU C06 S21 SING N N 12 JOU C18 O19 DOUB N N 13 JOU C18 O20 SING N N 14 JOU N05 C04 DOUB N N 15 JOU C12 C13 SING N N 16 JOU S21 C22 SING N N 17 JOU C13 N14 TRIP N N 18 JOU O03 C02 DOUB N N 19 JOU C22 C23 SING N N 20 JOU C04 C02 SING N N 21 JOU C04 C23 SING N N 22 JOU C02 O01 SING N N 23 JOU C31 N30 SING N N 24 JOU C23 C24 SING N N 25 JOU C24 S25 SING N N 26 JOU N30 N29 SING Y N 27 JOU N30 C26 SING Y N 28 JOU N29 N28 DOUB Y N 29 JOU S25 C26 SING N N 30 JOU C26 N27 DOUB Y N 31 JOU N28 N27 SING Y N 32 JOU C06 H061 SING N N 33 JOU C10 H101 SING N N 34 JOU C10 H102 SING N N 35 JOU C12 H121 SING N N 36 JOU C12 H122 SING N N 37 JOU C17 H172 SING N N 38 JOU C17 H171 SING N N 39 JOU C17 H173 SING N N 40 JOU C22 H222 SING N N 41 JOU C22 H221 SING N N 42 JOU C23 H231 SING N N 43 JOU C24 H241 SING N N 44 JOU C24 H242 SING N N 45 JOU C31 H311 SING N N 46 JOU C31 H313 SING N N 47 JOU C31 H312 SING N N 48 JOU N08 H081 SING N N 49 JOU O01 H4 SING N N 50 JOU O20 H5 SING N N 51 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor JOU InChI InChI 1.06 "InChI=1S/C15H19N7O6S3/c1-22-14(19-20-21-22)31-6-8-5-30-12(17-10(8)11(24)25)15(28-2,13(26)27)18-9(23)7-29-4-3-16/h8,12H,4-7H2,1-2H3,(H,18,23)(H,24,25)(H,26,27)/t8-,12-,15-/m1/s1" JOU InChIKey InChI 1.06 VZQGYYZNCGIOGL-AOAMOSOWSA-N JOU SMILES_CANONICAL CACTVS 3.385 "CO[C@](NC(=O)CSCC#N)([C@H]1SC[C@H](CSc2nnnn2C)C(=N1)C(O)=O)C(O)=O" JOU SMILES CACTVS 3.385 "CO[C](NC(=O)CSCC#N)([CH]1SC[CH](CSc2nnnn2C)C(=N1)C(O)=O)C(O)=O" JOU SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cn1c(nnn1)SC[C@H]2CS[C@@H](N=C2C(=O)O)[C@@](C(=O)O)(NC(=O)CSCC#N)OC" JOU SMILES "OpenEye OEToolkits" 2.0.7 "Cn1c(nnn1)SCC2CSC(N=C2C(=O)O)C(C(=O)O)(NC(=O)CSCC#N)OC" # _pdbx_chem_comp_identifier.comp_id JOU _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{R},5~{R})-2-[(1~{S})-1-[2-(cyanomethylsulfanyl)ethanoylamino]-1-methoxy-2-oxidanyl-2-oxidanylidene-ethyl]-5-[(1-methyl-1,2,3,4-tetrazol-5-yl)sulfanylmethyl]-5,6-dihydro-2~{H}-1,3-thiazine-4-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site JOU "Create component" 2022-05-06 PDBE JOU "Modify descriptor" 2022-08-22 RCSB JOU "Initial release" 2023-03-08 RCSB #