data_JP9 # _chem_comp.id JP9 _chem_comp.name "(3~{S},4~{S})-2,3,4-tris(oxidanyl)-5-oxidanylidene-6-phosphonooxy-hexane-1-sulfonic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-08-08 _chem_comp.pdbx_modified_date 2023-10-20 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 324.200 _chem_comp.one_letter_code ? _chem_comp.three_letter_code JP9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code 8Q59 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal JP9 C1 C1 C 0 1 N N N -5.382 -50.092 20.029 ? ? ? C1 JP9 1 JP9 C2 C2 C 0 1 N N N -6.244 -51.285 19.616 ? ? ? C2 JP9 2 JP9 C3 C3 C 0 1 N N R -4.660 -49.418 18.917 ? ? ? C3 JP9 3 JP9 C4 C4 C 0 1 N N R -3.289 -50.185 18.913 ? ? ? C4 JP9 4 JP9 C5 C5 C 0 1 N N R -2.081 -49.780 17.936 ? ? ? C5 JP9 5 JP9 C6 C6 C 0 1 N N N -0.483 -49.745 18.234 ? ? ? C6 JP9 6 JP9 S1 S1 S 0 1 N N N 0.469 -48.493 17.276 ? ? ? S1 JP9 7 JP9 O2 O1 O 0 1 N N N -5.552 -52.561 19.610 ? ? ? O2 JP9 8 JP9 O3 O2 O 0 1 N N N -7.252 -54.459 19.540 ? ? ? O3 JP9 9 JP9 O4 O3 O 0 1 N N N -4.964 -54.891 18.858 ? ? ? O4 JP9 10 JP9 O5 O4 O 0 1 N N N -6.327 -53.426 17.463 ? ? ? O5 JP9 11 JP9 O6 O5 O 0 1 N N N -4.989 -48.119 19.364 ? ? ? O6 JP9 12 JP9 O7 O6 O 0 1 N N N -2.836 -50.310 20.258 ? ? ? O7 JP9 13 JP9 O8 O7 O 0 1 N N N -2.169 -50.731 16.907 ? ? ? O8 JP9 14 JP9 O9 O8 O 0 1 N N N -0.382 -48.294 16.123 ? ? ? O9 JP9 15 JP9 O10 O9 O 0 1 N N N 0.588 -47.259 18.041 ? ? ? O10 JP9 16 JP9 O11 O10 O 0 1 N N N 1.798 -48.977 16.912 ? ? ? O11 JP9 17 JP9 O1 O11 O 0 1 N N N -5.253 -49.578 21.170 ? ? ? O1 JP9 18 JP9 P1 P1 P 0 1 N N N -6.044 -53.868 18.827 ? ? ? P1 JP9 19 JP9 H1 H1 H 0 1 N N N -6.625 -51.097 18.601 ? ? ? H1 JP9 20 JP9 H2 H2 H 0 1 N N N -7.088 -51.357 20.317 ? ? ? H2 JP9 21 JP9 H3 H3 H 0 1 N N N -5.175 -49.635 17.969 ? ? ? H3 JP9 22 JP9 H4 H4 H 0 1 N N N -3.553 -51.204 18.594 ? ? ? H4 JP9 23 JP9 H5 H5 H 0 1 N N N -2.335 -48.792 17.525 ? ? ? H5 JP9 24 JP9 H6 H6 H 0 1 N N N -0.072 -50.738 17.999 ? ? ? H6 JP9 25 JP9 H7 H7 H 0 1 N N N -0.341 -49.534 19.304 ? ? ? H7 JP9 26 JP9 H8 H8 H 0 1 N N N -8.004 -54.439 18.960 ? ? ? H8 JP9 27 JP9 H9 H9 H 0 1 N N N -4.663 -55.061 17.973 ? ? ? H9 JP9 28 JP9 H10 H10 H 0 1 N N N -5.235 -48.152 20.281 ? ? ? H10 JP9 29 JP9 H11 H11 H 0 1 N N N -3.544 -50.093 20.853 ? ? ? H11 JP9 30 JP9 H12 H12 H 0 1 N N N -3.077 -50.835 16.648 ? ? ? H12 JP9 31 JP9 H13 H13 H 0 1 N N N 1.506 -47.034 18.139 ? ? ? H13 JP9 32 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal JP9 O9 S1 DOUB N N 1 JP9 O8 C5 SING N N 2 JP9 O11 S1 DOUB N N 3 JP9 S1 O10 SING N N 4 JP9 S1 C6 SING N N 5 JP9 O5 P1 DOUB N N 6 JP9 C5 C6 SING N N 7 JP9 C5 C4 SING N N 8 JP9 P1 O4 SING N N 9 JP9 P1 O3 SING N N 10 JP9 P1 O2 SING N N 11 JP9 C4 C3 SING N N 12 JP9 C4 O7 SING N N 13 JP9 C3 O6 SING N N 14 JP9 C3 C1 SING N N 15 JP9 O2 C2 SING N N 16 JP9 C2 C1 SING N N 17 JP9 C1 O1 DOUB N N 18 JP9 C2 H1 SING N N 19 JP9 C2 H2 SING N N 20 JP9 C3 H3 SING N N 21 JP9 C4 H4 SING N N 22 JP9 C5 H5 SING N N 23 JP9 C6 H6 SING N N 24 JP9 C6 H7 SING N N 25 JP9 O3 H8 SING N N 26 JP9 O4 H9 SING N N 27 JP9 O6 H10 SING N N 28 JP9 O7 H11 SING N N 29 JP9 O8 H12 SING N N 30 JP9 O10 H13 SING N N 31 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor JP9 InChI InChI 1.06 "InChI=1S/C6H13O11PS/c7-3(1-17-18(11,12)13)5(9)6(10)4(8)2-19(14,15)16/h4-6,8-10H,1-2H2,(H2,11,12,13)(H,14,15,16)/t4-,5-,6-/m1/s1" JP9 InChIKey InChI 1.06 BXFAKMQEOMYBNM-HSUXUTPPSA-N JP9 SMILES_CANONICAL CACTVS 3.385 "O[C@H](C[S](O)(=O)=O)[C@@H](O)[C@H](O)C(=O)CO[P](O)(O)=O" JP9 SMILES CACTVS 3.385 "O[CH](C[S](O)(=O)=O)[CH](O)[CH](O)C(=O)CO[P](O)(O)=O" JP9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@H]([C@H]([C@@H](C(=O)COP(=O)(O)O)O)O)O)S(=O)(=O)O" JP9 SMILES "OpenEye OEToolkits" 2.0.7 "C(C(C(C(C(=O)COP(=O)(O)O)O)O)O)S(=O)(=O)O" # _pdbx_chem_comp_identifier.comp_id JP9 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S},3~{S},4~{S})-2,3,4-tris(oxidanyl)-5-oxidanylidene-6-phosphonooxy-hexane-1-sulfonic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site JP9 "Create component" 2023-08-08 PDBE JP9 "Initial release" 2023-10-25 RCSB #