data_JPH # _chem_comp.id JPH _chem_comp.name "2-[2-[4-(2,3-dihydro-1,4-benzodioxin-6-yl)-1,2,3-triazol-1-yl]ethyl]-6-methyl-1~{H}-pyrimidin-4-one" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H17 N5 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-03-14 _chem_comp.pdbx_modified_date 2020-02-14 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 339.349 _chem_comp.one_letter_code ? _chem_comp.three_letter_code JPH _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6R1P _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal JPH N1 N1 N 0 1 N N N -0.327 -25.970 7.383 4.804 0.853 -0.337 N1 JPH 1 JPH N3 N2 N 0 1 N N N -0.813 -27.919 8.750 5.378 -1.151 0.668 N3 JPH 2 JPH C4 C1 C 0 1 N N N -0.974 -27.121 9.827 6.688 -0.786 0.747 C4 JPH 3 JPH C5 C2 C 0 1 N N N -0.832 -25.716 9.746 7.066 0.424 0.275 C5 JPH 4 JPH C6 C3 C 0 1 N N N -0.494 -25.150 8.516 6.081 1.271 -0.287 C6 JPH 5 JPH CAU C4 C 0 1 Y N N -6.657 -28.629 4.597 -3.788 -0.744 -0.394 CAU JPH 6 JPH CAT C5 C 0 1 Y N N -7.952 -28.209 4.223 -5.102 -0.445 -0.076 CAT JPH 7 JPH OAV O1 O 0 1 N N N -9.094 -28.863 4.637 -6.078 -1.352 -0.355 OAV JPH 8 JPH CAW C6 C 0 1 N N N -10.379 -28.231 4.377 -7.331 -1.177 0.315 CAW JPH 9 JPH CAX C7 C 0 1 N N N -10.364 -27.690 2.991 -7.724 0.303 0.218 CAX JPH 10 JPH OAY O2 O 0 1 N N N -9.347 -26.696 3.000 -6.698 1.081 0.844 OAY JPH 11 JPH CAS C8 C 0 1 Y N N -8.102 -27.108 3.390 -5.412 0.773 0.520 CAS JPH 12 JPH CAR C9 C 0 1 Y N N -6.968 -26.442 2.957 -4.405 1.689 0.793 CAR JPH 13 JPH CAQ C10 C 0 1 Y N N -5.691 -26.840 3.335 -3.095 1.395 0.476 CAQ JPH 14 JPH CAP C11 C 0 1 Y N N -5.527 -27.937 4.145 -2.778 0.173 -0.114 CAP JPH 15 JPH CAM C12 C 0 1 Y N N -4.287 -28.268 4.470 -1.368 -0.145 -0.454 CAM JPH 16 JPH CAL C13 C 0 1 Y N N -3.285 -27.394 4.579 -0.266 0.607 -0.168 CAL JPH 17 JPH NAN N3 N 0 1 Y N N -3.864 -29.494 4.744 -0.920 -1.236 -1.101 NAN JPH 18 JPH NAO N4 N 0 1 Y N N -2.551 -29.361 5.026 0.359 -1.157 -1.209 NAO JPH 19 JPH NAK N5 N 0 1 Y N N -2.200 -28.072 4.942 0.791 -0.074 -0.666 NAK JPH 20 JPH CAJ C14 C 0 1 N N N -0.883 -27.536 5.166 2.192 0.349 -0.596 CAJ JPH 21 JPH CAI C15 C 0 1 N N N -0.284 -28.212 6.390 3.026 -0.756 0.054 CAI JPH 22 JPH C2 C16 C 0 1 N N N -0.490 -27.385 7.532 4.467 -0.321 0.127 C2 JPH 23 JPH CAA C17 C 0 1 N N N -1.323 -27.685 11.047 7.704 -1.720 1.354 CAA JPH 24 JPH O6 O3 O 0 1 N N N -0.339 -23.937 8.417 6.387 2.370 -0.724 O6 JPH 25 JPH H1 H1 H 0 1 N N N -0.982 -25.095 10.617 8.099 0.738 0.326 H1 JPH 26 JPH H3 H3 H 0 1 N N N -6.537 -29.491 5.237 -3.545 -1.690 -0.856 H3 JPH 27 JPH H4 H4 H 0 1 N N N -10.542 -27.413 5.094 -8.093 -1.792 -0.164 H4 JPH 28 JPH H5 H5 H 0 1 N N N -11.185 -28.973 4.478 -7.232 -1.464 1.362 H5 JPH 29 JPH H6 H6 H 0 1 N N N -11.338 -27.246 2.738 -7.816 0.591 -0.830 H6 JPH 30 JPH H7 H7 H 0 1 N N N -10.124 -28.483 2.268 -8.673 0.466 0.729 H7 JPH 31 JPH H8 H8 H 0 1 N N N -7.079 -25.587 2.306 -4.649 2.636 1.250 H8 JPH 32 JPH H9 H9 H 0 1 N N N -4.829 -26.287 2.992 -2.315 2.110 0.689 H9 JPH 33 JPH H10 H10 H 0 1 N N N -3.344 -26.330 4.404 -0.243 1.554 0.351 H10 JPH 34 JPH H11 H11 H 0 1 N N N -0.250 -27.731 4.288 2.564 0.541 -1.602 H11 JPH 35 JPH H12 H12 H 0 1 N N N -0.949 -26.451 5.337 2.267 1.259 -0.001 H12 JPH 36 JPH H13 H13 H 0 1 N N N -0.772 -29.185 6.548 2.654 -0.948 1.061 H13 JPH 37 JPH H14 H14 H 0 1 N N N 0.795 -28.363 6.235 2.951 -1.666 -0.541 H14 JPH 38 JPH H15 H15 H 0 1 N N N -1.410 -26.893 11.806 8.120 -2.359 0.576 H15 JPH 39 JPH H16 H16 H 0 1 N N N -2.287 -28.206 10.948 8.503 -1.138 1.813 H16 JPH 40 JPH H17 H17 H 0 1 N N N -0.548 -28.403 11.354 7.222 -2.337 2.112 H17 JPH 41 JPH H18 H18 H 0 1 N N N -0.931 -28.908 8.843 5.099 -2.017 1.004 H18 JPH 42 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal JPH CAR CAQ DOUB Y N 1 JPH CAR CAS SING Y N 2 JPH CAX OAY SING N N 3 JPH CAX CAW SING N N 4 JPH OAY CAS SING N N 5 JPH CAQ CAP SING Y N 6 JPH CAS CAT DOUB Y N 7 JPH CAP CAM SING N N 8 JPH CAP CAU DOUB Y N 9 JPH CAT CAU SING Y N 10 JPH CAT OAV SING N N 11 JPH CAW OAV SING N N 12 JPH CAM CAL DOUB Y N 13 JPH CAM NAN SING Y N 14 JPH CAL NAK SING Y N 15 JPH NAN NAO DOUB Y N 16 JPH NAK NAO SING Y N 17 JPH NAK CAJ SING N N 18 JPH CAJ CAI SING N N 19 JPH CAI C2 SING N N 20 JPH N1 C2 DOUB N N 21 JPH N1 C6 SING N N 22 JPH C2 N3 SING N N 23 JPH O6 C6 DOUB N N 24 JPH C6 C5 SING N N 25 JPH N3 C4 SING N N 26 JPH C5 C4 DOUB N N 27 JPH C4 CAA SING N N 28 JPH C5 H1 SING N N 29 JPH CAU H3 SING N N 30 JPH CAW H4 SING N N 31 JPH CAW H5 SING N N 32 JPH CAX H6 SING N N 33 JPH CAX H7 SING N N 34 JPH CAR H8 SING N N 35 JPH CAQ H9 SING N N 36 JPH CAL H10 SING N N 37 JPH CAJ H11 SING N N 38 JPH CAJ H12 SING N N 39 JPH CAI H13 SING N N 40 JPH CAI H14 SING N N 41 JPH CAA H15 SING N N 42 JPH CAA H16 SING N N 43 JPH CAA H17 SING N N 44 JPH N3 H18 SING N N 45 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor JPH InChI InChI 1.03 "InChI=1S/C17H17N5O3/c1-11-8-17(23)19-16(18-11)4-5-22-10-13(20-21-22)12-2-3-14-15(9-12)25-7-6-24-14/h2-3,8-10H,4-7H2,1H3,(H,18,19,23)" JPH InChIKey InChI 1.03 HUPUXSMUAITIDA-UHFFFAOYSA-N JPH SMILES_CANONICAL CACTVS 3.385 "CC1=CC(=O)N=C(CCn2cc(nn2)c3ccc4OCCOc4c3)N1" JPH SMILES CACTVS 3.385 "CC1=CC(=O)N=C(CCn2cc(nn2)c3ccc4OCCOc4c3)N1" JPH SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1=CC(=O)N=C(N1)CCn2cc(nn2)c3ccc4c(c3)OCCO4" JPH SMILES "OpenEye OEToolkits" 2.0.7 "CC1=CC(=O)N=C(N1)CCn2cc(nn2)c3ccc4c(c3)OCCO4" # _pdbx_chem_comp_identifier.comp_id JPH _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-[2-[4-(2,3-dihydro-1,4-benzodioxin-6-yl)-1,2,3-triazol-1-yl]ethyl]-6-methyl-1~{H}-pyrimidin-4-one" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site JPH "Create component" 2019-03-14 EBI JPH "Initial release" 2020-02-19 RCSB ##