data_K3R # _chem_comp.id K3R _chem_comp.name "~{N}-[[4-(1-methylpyrazol-4-yl)phenyl]methyl]-6-[7-(3-pyrrolidin-1-ylpropoxy)imidazo[1,2-a]pyridin-3-yl]pyrimidin-4-amine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H32 N8 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "[4-(1-Methyl-1H-pyrazol-4-yl)-benzyl]-{6-[7-(3-pyrrolidin-1-yl-propoxy)-imidazo[1,2-a]pyridin-3-yl]-pyrimidin-4-yl}-amine" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-05-19 _chem_comp.pdbx_modified_date 2023-02-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 508.617 _chem_comp.one_letter_code ? _chem_comp.three_letter_code K3R _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7ZW8 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal K3R C1 C1 C 0 1 N N N 16.931 13.627 -20.652 10.392 -4.319 -1.279 C1 K3R 1 K3R C3 C2 C 0 1 Y N N 15.615 12.517 -18.839 8.369 -2.891 -0.893 C3 K3R 2 K3R C4 C3 C 0 1 Y N N 14.385 11.928 -18.690 7.708 -2.403 0.196 C4 K3R 3 K3R C5 C4 C 0 1 Y N N 13.774 11.987 -19.969 8.392 -2.850 1.343 C5 K3R 4 K3R C7 C5 C 0 1 Y N N 13.814 11.400 -17.403 6.490 -1.554 0.176 C7 K3R 5 K3R C8 C6 C 0 1 Y N N 14.675 11.026 -16.361 5.912 -1.190 -1.039 C8 K3R 6 K3R C11 C7 C 0 1 N N N 12.257 10.004 -13.641 2.981 0.887 0.117 C11 K3R 7 K3R C15 C8 C 0 1 Y N N 10.019 5.652 -14.174 0.104 3.978 0.042 C15 K3R 8 K3R C17 C9 C 0 1 Y N N 12.334 5.816 -14.079 1.820 5.519 -0.008 C17 K3R 9 K3R C19 C10 C 0 1 Y N N 8.812 4.817 -14.319 -1.338 3.677 0.049 C19 K3R 10 K3R C23 C11 C 0 1 Y N N 6.997 1.785 -14.368 -4.135 1.509 -0.108 C23 K3R 11 K3R C24 C12 C 0 1 Y N N 7.936 0.766 -14.249 -3.595 0.250 -0.251 C24 K3R 12 K3R O25 O1 O 0 1 N N N 7.563 -0.554 -14.206 -4.404 -0.836 -0.344 O25 K3R 13 K3R C27 C13 C 0 1 N N N 6.035 -2.343 -14.861 -6.556 -1.933 -0.408 C27 K3R 14 K3R C30 C14 C 0 1 N N N 5.241 -5.291 -14.827 -10.225 -2.744 -0.648 C30 K3R 15 K3R C31 C15 C 0 1 N N N 5.475 -6.828 -14.907 -10.949 -3.497 0.487 C31 K3R 16 K3R C32 C16 C 0 1 N N N 6.713 -7.015 -13.979 -9.908 -4.564 0.918 C32 K3R 17 K3R C33 C17 C 0 1 N N N 7.531 -5.716 -14.200 -8.578 -3.791 0.743 C33 K3R 18 K3R C34 C18 C 0 1 Y N N 9.302 1.111 -14.148 -2.195 0.099 -0.299 C34 K3R 19 K3R C35 C19 C 0 1 Y N N 9.668 2.420 -14.156 -1.395 1.181 -0.210 C35 K3R 20 K3R C37 C20 C 0 1 Y N N 11.897 10.820 -16.021 4.785 -0.336 1.346 C37 K3R 21 K3R C38 C21 C 0 1 Y N N 12.414 11.317 -17.218 5.917 -1.125 1.370 C38 K3R 22 K3R N2 N1 N 0 1 Y N N 15.761 12.939 -20.118 9.415 -3.615 -0.445 N2 K3R 23 K3R N6 N2 N 0 1 Y N N 14.598 12.587 -20.818 9.411 -3.570 0.954 N6 K3R 24 K3R C9 C22 C 0 1 Y N N 14.152 10.560 -15.170 4.780 -0.401 -1.052 C9 K3R 25 K3R C10 C23 C 0 1 Y N N 12.773 10.454 -14.995 4.218 0.027 0.137 C10 K3R 26 K3R N12 N3 N 0 1 N N N 11.037 9.172 -13.694 3.369 2.300 0.081 N12 K3R 27 K3R C13 C24 C 0 1 Y N N 11.088 7.780 -13.844 2.395 3.286 0.057 C13 K3R 28 K3R C14 C25 C 0 1 Y N N 9.905 7.049 -13.979 1.046 2.945 0.066 C14 K3R 29 K3R N16 N4 N 0 1 Y N N 11.242 5.071 -14.183 0.533 5.245 0.005 N16 K3R 30 K3R N18 N5 N 0 1 Y N N 12.266 7.140 -13.905 2.737 4.573 0.015 N18 K3R 31 K3R C20 C26 C 0 1 Y N N 7.520 5.299 -14.453 -2.368 4.584 0.167 C20 K3R 32 K3R N21 N6 N 0 1 Y N N 6.693 4.257 -14.483 -3.517 3.918 0.125 N21 K3R 33 K3R C22 C27 C 0 1 Y N N 7.396 3.126 -14.374 -3.276 2.617 -0.014 C22 K3R 34 K3R C26 C28 C 0 1 N N N 6.183 -0.951 -14.251 -5.813 -0.601 -0.288 C26 K3R 35 K3R C28 C29 C 0 1 N N N 6.654 -3.434 -13.991 -8.064 -1.683 -0.348 C28 K3R 36 K3R N29 N7 N 0 1 N N N 6.607 -4.702 -14.759 -8.778 -2.961 -0.463 N29 K3R 37 K3R N36 N8 N 0 1 Y N N 8.734 3.424 -14.264 -1.921 2.430 -0.065 N36 K3R 38 K3R H1 H1 H 0 1 N N N 16.775 13.842 -21.719 11.224 -3.652 -1.505 H1 K3R 39 K3R H2 H2 H 0 1 N N N 17.083 14.570 -20.106 10.762 -5.194 -0.745 H2 K3R 40 K3R H3 H3 H 0 1 N N N 17.818 12.988 -20.533 9.917 -4.635 -2.208 H3 K3R 41 K3R H4 H4 H 0 1 N N N 16.353 12.627 -18.058 8.100 -2.731 -1.927 H4 K3R 42 K3R H5 H5 H 0 1 N N N 12.794 11.604 -20.213 8.122 -2.635 2.366 H5 K3R 43 K3R H6 H6 H 0 1 N N N 15.745 11.102 -16.489 6.350 -1.523 -1.968 H6 K3R 44 K3R H7 H7 H 0 1 N N N 13.049 9.421 -13.148 2.389 0.651 -0.767 H7 K3R 45 K3R H8 H8 H 0 1 N N N 12.036 10.900 -13.043 2.390 0.696 1.012 H8 K3R 46 K3R H9 H9 H 0 1 N N N 13.303 5.342 -14.136 2.135 6.552 -0.042 H9 K3R 47 K3R H10 H10 H 0 1 N N N 5.949 1.539 -14.457 -5.206 1.643 -0.070 H10 K3R 48 K3R H11 H11 H 0 1 N N N 4.964 -2.560 -14.989 -6.304 -2.406 -1.358 H11 K3R 49 K3R H12 H12 H 0 1 N N N 6.531 -2.352 -15.843 -6.264 -2.588 0.412 H12 K3R 50 K3R H13 H13 H 0 1 N N N 4.709 -4.933 -15.720 -10.539 -3.139 -1.615 H13 K3R 51 K3R H14 H14 H 0 1 N N N 4.663 -5.033 -13.928 -10.450 -1.679 -0.592 H14 K3R 52 K3R H15 H15 H 0 1 N N N 4.605 -7.385 -14.530 -11.175 -2.824 1.314 H15 K3R 53 K3R H16 H16 H 0 1 N N N 5.696 -7.146 -15.937 -11.857 -3.973 0.116 H16 K3R 54 K3R H17 H17 H 0 1 N N N 6.405 -7.112 -12.927 -10.057 -4.857 1.957 H17 K3R 55 K3R H18 H18 H 0 1 N N N 7.295 -7.901 -14.273 -9.945 -5.433 0.261 H18 K3R 56 K3R H19 H19 H 0 1 N N N 8.354 -5.905 -14.905 -8.389 -3.159 1.611 H19 K3R 57 K3R H20 H20 H 0 1 N N N 7.942 -5.363 -13.243 -7.752 -4.487 0.595 H20 K3R 58 K3R H21 H21 H 0 1 N N N 10.052 0.338 -14.065 -1.763 -0.884 -0.410 H21 K3R 59 K3R H22 H22 H 0 1 N N N 10.714 2.677 -14.076 -0.323 1.055 -0.248 H22 K3R 60 K3R H23 H23 H 0 1 N N N 10.830 10.719 -15.888 4.342 0.001 2.272 H23 K3R 61 K3R H24 H24 H 0 1 N N N 11.745 11.638 -18.003 6.359 -1.408 2.315 H24 K3R 62 K3R H25 H25 H 0 1 N N N 14.817 10.276 -14.368 4.331 -0.118 -1.993 H25 K3R 63 K3R H26 H26 H 0 1 N N N 10.498 9.516 -14.463 4.307 2.545 0.074 H26 K3R 64 K3R H27 H27 H 0 1 N N N 8.940 7.532 -13.936 0.736 1.911 0.092 H27 K3R 65 K3R H28 H28 H 0 1 N N N 7.234 6.338 -14.521 -2.260 5.653 0.274 H28 K3R 66 K3R H29 H29 H 0 1 N N N 5.620 -0.229 -14.861 -6.065 -0.129 0.662 H29 K3R 67 K3R H30 H30 H 0 1 N N N 5.778 -0.961 -13.228 -6.106 0.054 -1.109 H30 K3R 68 K3R H31 H31 H 0 1 N N N 7.697 -3.178 -13.754 -8.317 -1.210 0.601 H31 K3R 69 K3R H32 H32 H 0 1 N N N 6.081 -3.539 -13.058 -8.357 -1.028 -1.169 H32 K3R 70 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal K3R N6 N2 SING Y N 1 K3R N6 C5 DOUB Y N 2 K3R C1 N2 SING N N 3 K3R N2 C3 SING Y N 4 K3R C5 C4 SING Y N 5 K3R C3 C4 DOUB Y N 6 K3R C4 C7 SING N N 7 K3R C7 C38 DOUB Y N 8 K3R C7 C8 SING Y N 9 K3R C38 C37 SING Y N 10 K3R C8 C9 DOUB Y N 11 K3R C37 C10 DOUB Y N 12 K3R C9 C10 SING Y N 13 K3R C10 C11 SING N N 14 K3R C31 C30 SING N N 15 K3R C31 C32 SING N N 16 K3R C27 C26 SING N N 17 K3R C27 C28 SING N N 18 K3R C30 N29 SING N N 19 K3R N29 C33 SING N N 20 K3R N29 C28 SING N N 21 K3R N21 C20 SING Y N 22 K3R N21 C22 DOUB Y N 23 K3R C20 C19 DOUB Y N 24 K3R C22 C23 SING Y N 25 K3R C22 N36 SING Y N 26 K3R C23 C24 DOUB Y N 27 K3R C19 N36 SING Y N 28 K3R C19 C15 SING N N 29 K3R N36 C35 SING Y N 30 K3R C26 O25 SING N N 31 K3R C24 O25 SING N N 32 K3R C24 C34 SING Y N 33 K3R C33 C32 SING N N 34 K3R N16 C15 DOUB Y N 35 K3R N16 C17 SING Y N 36 K3R C15 C14 SING Y N 37 K3R C35 C34 DOUB Y N 38 K3R C17 N18 DOUB Y N 39 K3R C14 C13 DOUB Y N 40 K3R N18 C13 SING Y N 41 K3R C13 N12 SING N N 42 K3R N12 C11 SING N N 43 K3R C1 H1 SING N N 44 K3R C1 H2 SING N N 45 K3R C1 H3 SING N N 46 K3R C3 H4 SING N N 47 K3R C5 H5 SING N N 48 K3R C8 H6 SING N N 49 K3R C11 H7 SING N N 50 K3R C11 H8 SING N N 51 K3R C17 H9 SING N N 52 K3R C23 H10 SING N N 53 K3R C27 H11 SING N N 54 K3R C27 H12 SING N N 55 K3R C30 H13 SING N N 56 K3R C30 H14 SING N N 57 K3R C31 H15 SING N N 58 K3R C31 H16 SING N N 59 K3R C32 H17 SING N N 60 K3R C32 H18 SING N N 61 K3R C33 H19 SING N N 62 K3R C33 H20 SING N N 63 K3R C34 H21 SING N N 64 K3R C35 H22 SING N N 65 K3R C37 H23 SING N N 66 K3R C38 H24 SING N N 67 K3R C9 H25 SING N N 68 K3R N12 H26 SING N N 69 K3R C14 H27 SING N N 70 K3R C20 H28 SING N N 71 K3R C26 H29 SING N N 72 K3R C26 H30 SING N N 73 K3R C28 H31 SING N N 74 K3R C28 H32 SING N N 75 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor K3R InChI InChI 1.06 "InChI=1S/C29H32N8O/c1-35-20-24(18-34-35)23-7-5-22(6-8-23)17-30-28-16-26(32-21-33-28)27-19-31-29-15-25(9-13-37(27)29)38-14-4-12-36-10-2-3-11-36/h5-9,13,15-16,18-21H,2-4,10-12,14,17H2,1H3,(H,30,32,33)" K3R InChIKey InChI 1.06 LVMAULGVWBINFP-UHFFFAOYSA-N K3R SMILES_CANONICAL CACTVS 3.385 "Cn1cc(cn1)c2ccc(CNc3cc(ncn3)c4cnc5cc(OCCCN6CCCC6)ccn45)cc2" K3R SMILES CACTVS 3.385 "Cn1cc(cn1)c2ccc(CNc3cc(ncn3)c4cnc5cc(OCCCN6CCCC6)ccn45)cc2" K3R SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cn1cc(cn1)c2ccc(cc2)CNc3cc(ncn3)c4cnc5n4ccc(c5)OCCCN6CCCC6" K3R SMILES "OpenEye OEToolkits" 2.0.7 "Cn1cc(cn1)c2ccc(cc2)CNc3cc(ncn3)c4cnc5n4ccc(c5)OCCCN6CCCC6" # _pdbx_chem_comp_identifier.comp_id K3R _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[[4-(1-methylpyrazol-4-yl)phenyl]methyl]-6-[7-(3-pyrrolidin-1-ylpropoxy)imidazo[1,2-a]pyridin-3-yl]pyrimidin-4-amine" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id K3R _pdbx_chem_comp_synonyms.name "[4-(1-Methyl-1H-pyrazol-4-yl)-benzyl]-{6-[7-(3-pyrrolidin-1-yl-propoxy)-imidazo[1,2-a]pyridin-3-yl]-pyrimidin-4-yl}-amine" _pdbx_chem_comp_synonyms.provenance AUTHOR _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site K3R "Create component" 2022-05-19 PDBE K3R "Modify descriptor" 2022-08-22 RCSB K3R "Initial release" 2023-02-22 RCSB #