data_KO0 # _chem_comp.id KO0 _chem_comp.name Himbacine _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H35 N O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(3S,3aR,4S,4R,8aR,9aS)-4-[(E)-2-[(2R,6S)-1,6-dimethylpiperidin-2-yl]ethenyl]-3-methyl-3a,4,4a,5,6,7,8,8a,9,9a-decahydro-3H-benzo[f][2]benzofuran-1-one" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-05-31 _chem_comp.pdbx_modified_date 2023-01-20 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 345.519 _chem_comp.one_letter_code ? _chem_comp.three_letter_code KO0 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7ZG9 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal KO0 C1 C1 C 0 1 N N R -31.957 47.033 25.207 1.577 1.102 -0.786 C1 KO0 1 KO0 C2 C2 C 0 1 N N S -31.878 48.395 24.545 3.007 1.413 -0.302 C2 KO0 2 KO0 C3 C3 C 0 1 N N N -32.983 49.268 25.094 3.653 0.164 0.281 C3 KO0 3 KO0 C4 C4 C 0 1 N N R -32.742 49.568 26.579 3.324 -1.032 -0.613 C4 KO0 4 KO0 C5 C5 C 0 1 N N R -32.346 48.342 27.442 1.846 -1.386 -0.471 C5 KO0 5 KO0 C6 C6 C 0 1 N N S -32.460 47.028 26.671 1.050 -0.145 -0.073 C6 KO0 6 KO0 C7 C7 C 0 1 N N S -33.099 46.385 24.423 0.762 2.315 -0.279 C7 KO0 7 KO0 C8 C8 C 0 1 N N N -32.273 48.095 23.153 2.816 2.474 0.758 C8 KO0 8 KO0 O9 O1 O 0 1 N N N -33.093 46.924 23.090 1.706 3.188 0.405 O9 KO0 9 KO0 O10 O2 O 0 1 N N N -31.992 48.736 22.156 3.509 2.651 1.732 O10 KO0 10 KO0 C11 C9 C 0 1 N N N -33.020 44.864 24.330 0.127 3.051 -1.461 C11 KO0 11 KO0 C12 C10 C 0 1 N N N -33.008 48.206 28.822 1.674 -2.457 0.609 C12 KO0 12 KO0 C13 C11 C 0 1 N N N -33.942 49.318 29.301 2.271 -3.782 0.138 C13 KO0 13 KO0 C14 C12 C 0 1 N N N -33.728 50.657 28.600 3.515 -3.516 -0.711 C14 KO0 14 KO0 C15 C13 C 0 1 N N N -33.882 50.449 27.098 4.191 -2.230 -0.232 C15 KO0 15 KO0 C16 C14 C 0 1 N N N -32.217 45.718 27.458 -0.394 -0.356 -0.450 C16 KO0 16 KO0 C17 C15 C 0 1 N N N -31.081 45.092 27.842 -1.319 -0.355 0.477 C17 KO0 17 KO0 C18 C16 C 0 1 N N R -31.243 43.748 28.577 -2.763 -0.566 0.100 C18 KO0 18 KO0 C19 C17 C 0 1 N N N -30.652 42.661 27.685 -3.334 -1.737 0.903 C19 KO0 19 KO0 C20 C18 C 0 1 N N N -30.603 41.281 28.353 -4.806 -1.935 0.531 C20 KO0 20 KO0 C21 C19 C 0 1 N N N -29.945 41.339 29.727 -5.572 -0.638 0.804 C21 KO0 21 KO0 C22 C20 C 0 1 N N S -30.625 42.409 30.579 -4.936 0.501 0.004 C22 KO0 22 KO0 N23 N1 N 0 1 N N N -30.600 43.736 29.904 -3.529 0.651 0.396 N23 KO0 23 KO0 C24 C21 C 0 1 N N N -32.054 41.981 30.907 -5.018 0.183 -1.490 C24 KO0 24 KO0 C25 C22 C 0 1 N N N -31.288 44.717 30.763 -2.924 1.824 -0.250 C25 KO0 25 KO0 H1 H1 H 0 1 N N N -31.018 46.469 25.101 1.527 1.000 -1.870 H1 KO0 26 KO0 H2 H2 H 0 1 N N N -30.883 48.856 24.630 3.608 1.797 -1.126 H2 KO0 27 KO0 H3 H3 H 0 1 N N N -33.010 50.214 24.533 4.733 0.299 0.326 H3 KO0 28 KO0 H4 H4 H 0 1 N N N -33.946 48.748 24.981 3.264 -0.013 1.284 H4 KO0 29 KO0 H5 H5 H 0 1 N N N -31.854 50.218 26.594 3.517 -0.766 -1.652 H5 KO0 30 KO0 H6 H6 H 0 1 N N N -31.273 48.469 27.646 1.471 -1.766 -1.421 H6 KO0 31 KO0 H7 H7 H 0 1 N N N -33.547 46.974 26.514 1.119 0.004 1.005 H7 KO0 32 KO0 H8 H8 H 0 1 N N N -34.046 46.649 24.917 -0.011 1.984 0.414 H8 KO0 33 KO0 H9 H9 H 0 1 N N N -33.023 44.434 25.342 -0.537 2.372 -1.996 H9 KO0 34 KO0 H10 H10 H 0 1 N N N -33.886 44.486 23.768 -0.445 3.903 -1.093 H10 KO0 35 KO0 H11 H11 H 0 1 N N N -32.093 44.576 23.812 0.909 3.401 -2.134 H11 KO0 36 KO0 H12 H12 H 0 1 N N N -33.593 47.275 28.810 2.181 -2.136 1.520 H12 KO0 37 KO0 H13 H13 H 0 1 N N N -32.199 48.121 29.562 0.613 -2.592 0.818 H13 KO0 38 KO0 H14 H14 H 0 1 N N N -33.782 49.463 30.379 2.545 -4.384 1.004 H14 KO0 39 KO0 H15 H15 H 0 1 N N N -34.979 48.998 29.125 1.534 -4.319 -0.459 H15 KO0 40 KO0 H16 H16 H 0 1 N N N -32.718 51.034 28.820 4.208 -4.351 -0.611 H16 KO0 41 KO0 H17 H17 H 0 1 N N N -34.475 51.383 28.952 3.225 -3.408 -1.757 H17 KO0 42 KO0 H18 H18 H 0 1 N N N -33.852 51.424 26.589 5.169 -2.135 -0.703 H18 KO0 43 KO0 H19 H19 H 0 1 N N N -34.845 49.958 26.894 4.310 -2.263 0.851 H19 KO0 44 KO0 H20 H20 H 0 1 N N N -33.122 45.209 27.756 -0.665 -0.508 -1.484 H20 KO0 45 KO0 H21 H21 H 0 1 N N N -30.107 45.514 27.643 -1.048 -0.203 1.511 H21 KO0 46 KO0 H22 H22 H 0 1 N N N -32.318 43.550 28.698 -2.832 -0.789 -0.965 H22 KO0 47 KO0 H23 H23 H 0 1 N N N -29.627 42.953 27.413 -2.775 -2.644 0.671 H23 KO0 48 KO0 H24 H24 H 0 1 N N N -31.265 42.586 26.775 -3.253 -1.522 1.968 H24 KO0 49 KO0 H25 H25 H 0 1 N N N -31.630 40.904 28.466 -4.884 -2.189 -0.526 H25 KO0 50 KO0 H26 H26 H 0 1 N N N -30.029 40.596 27.712 -5.228 -2.741 1.133 H26 KO0 51 KO0 H27 H27 H 0 1 N N N -30.043 40.361 30.221 -6.612 -0.759 0.501 H27 KO0 52 KO0 H28 H28 H 0 1 N N N -28.879 41.586 29.612 -5.526 -0.405 1.868 H28 KO0 53 KO0 H29 H29 H 0 1 N N N -30.071 42.491 31.526 -5.470 1.430 0.207 H29 KO0 54 KO0 H31 H31 H 0 1 N N N -32.538 42.756 31.520 -6.062 0.072 -1.782 H31 KO0 55 KO0 H32 H32 H 0 1 N N N -32.620 41.847 29.973 -4.565 0.994 -2.060 H32 KO0 56 KO0 H33 H33 H 0 1 N N N -32.034 41.032 31.463 -4.484 -0.746 -1.694 H33 KO0 57 KO0 H34 H34 H 0 1 N N N -30.822 44.723 31.759 -2.908 1.675 -1.330 H34 KO0 58 KO0 H35 H35 H 0 1 N N N -31.207 45.718 30.314 -3.511 2.711 -0.015 H35 KO0 59 KO0 H36 H36 H 0 1 N N N -32.349 44.442 30.856 -1.906 1.955 0.115 H36 KO0 60 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal KO0 O10 C8 DOUB N N 1 KO0 O9 C8 SING N N 2 KO0 O9 C7 SING N N 3 KO0 C8 C2 SING N N 4 KO0 C11 C7 SING N N 5 KO0 C7 C1 SING N N 6 KO0 C2 C3 SING N N 7 KO0 C2 C1 SING N N 8 KO0 C3 C4 SING N N 9 KO0 C1 C6 SING N N 10 KO0 C4 C15 SING N N 11 KO0 C4 C5 SING N N 12 KO0 C6 C5 SING N N 13 KO0 C6 C16 SING N N 14 KO0 C15 C14 SING N N 15 KO0 C5 C12 SING N N 16 KO0 C16 C17 DOUB N E 17 KO0 C19 C20 SING N N 18 KO0 C19 C18 SING N N 19 KO0 C17 C18 SING N N 20 KO0 C20 C21 SING N N 21 KO0 C18 N23 SING N N 22 KO0 C14 C13 SING N N 23 KO0 C12 C13 SING N N 24 KO0 C21 C22 SING N N 25 KO0 N23 C22 SING N N 26 KO0 N23 C25 SING N N 27 KO0 C22 C24 SING N N 28 KO0 C1 H1 SING N N 29 KO0 C2 H2 SING N N 30 KO0 C3 H3 SING N N 31 KO0 C3 H4 SING N N 32 KO0 C4 H5 SING N N 33 KO0 C5 H6 SING N N 34 KO0 C6 H7 SING N N 35 KO0 C7 H8 SING N N 36 KO0 C11 H9 SING N N 37 KO0 C11 H10 SING N N 38 KO0 C11 H11 SING N N 39 KO0 C12 H12 SING N N 40 KO0 C12 H13 SING N N 41 KO0 C13 H14 SING N N 42 KO0 C13 H15 SING N N 43 KO0 C14 H16 SING N N 44 KO0 C14 H17 SING N N 45 KO0 C15 H18 SING N N 46 KO0 C15 H19 SING N N 47 KO0 C16 H20 SING N N 48 KO0 C17 H21 SING N N 49 KO0 C18 H22 SING N N 50 KO0 C19 H23 SING N N 51 KO0 C19 H24 SING N N 52 KO0 C20 H25 SING N N 53 KO0 C20 H26 SING N N 54 KO0 C21 H27 SING N N 55 KO0 C21 H28 SING N N 56 KO0 C22 H29 SING N N 57 KO0 C24 H31 SING N N 58 KO0 C24 H32 SING N N 59 KO0 C24 H33 SING N N 60 KO0 C25 H34 SING N N 61 KO0 C25 H35 SING N N 62 KO0 C25 H36 SING N N 63 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor KO0 InChI InChI 1.06 "InChI=1S/C22H35NO2/c1-14-7-6-9-17(23(14)3)11-12-19-18-10-5-4-8-16(18)13-20-21(19)15(2)25-22(20)24/h11-12,14-21H,4-10,13H2,1-3H3/b12-11+/t14-,15-,16+,17+,18+,19-,20-,21+/m0/s1" KO0 InChIKey InChI 1.06 FMPNFDSPHNUFOS-YOASDKSVSA-N KO0 SMILES_CANONICAL CACTVS 3.385 "C[C@H]1CCC[C@H](/C=C/[C@H]2[C@@H]3CCCC[C@@H]3C[C@H]4[C@@H]2[C@H](C)OC4=O)N1C" KO0 SMILES CACTVS 3.385 "C[CH]1CCC[CH](C=C[CH]2[CH]3CCCC[CH]3C[CH]4[CH]2[CH](C)OC4=O)N1C" KO0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H]1CCC[C@@H](N1C)/C=C/[C@H]2[C@@H]3CCCC[C@@H]3C[C@H]4[C@@H]2[C@@H](OC4=O)C" KO0 SMILES "OpenEye OEToolkits" 2.0.7 "CC1CCCC(N1C)C=CC2C3CCCCC3CC4C2C(OC4=O)C" # _pdbx_chem_comp_identifier.comp_id KO0 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{S},3~{a}~{R},4~{S},4~{a}~{R},8~{a}~{R},9~{a}~{S})-4-[(~{E})-2-[(2~{R},6~{S})-1,6-dimethylpiperidin-2-yl]ethenyl]-3-methyl-3~{a},4,4~{a},5,6,7,8,8~{a},9,9~{a}-decahydro-3~{H}-benzo[f][2]benzofuran-1-one" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id KO0 _pdbx_chem_comp_synonyms.name "(3S,3aR,4S,4R,8aR,9aS)-4-[(E)-2-[(2R,6S)-1,6-dimethylpiperidin-2-yl]ethenyl]-3-methyl-3a,4,4a,5,6,7,8,8a,9,9a-decahydro-3H-benzo[f][2]benzofuran-1-one" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site KO0 "Create component" 2022-05-31 PDBE KO0 "Modify descriptor" 2022-08-22 RCSB KO0 "Initial release" 2023-01-25 RCSB #